LOCUS BC157866 1458 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens surfactant protein A2, mRNA (cDNA clone MGC:189761
IMAGE:9057085), complete cds.
ACCESSION BC157866
VERSION BC157866.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1458)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1458)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-DEC-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 13 Row: D Column: 24.
FEATURES Location/Qualifiers
source 1..1458
/db_xref="H-InvDB:HIT000503421"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:189761 IMAGE:9057085"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: AGAGGGTC"
gene 1..1458
/gene="SFTPA2"
/gene_synonym="COLEC5"
/gene_synonym="SP-A2"
/gene_synonym="SPA2"
/gene_synonym="SPAII"
/db_xref="GeneID:729238"
/db_xref="HGNC:HGNC:10799"
/db_xref="MIM:178642"
CDS 91..837
/gene="SFTPA2"
/gene_synonym="COLEC5"
/gene_synonym="SP-A2"
/gene_synonym="SPA2"
/gene_synonym="SPAII"
/codon_start=1
/product="surfactant protein A2"
/protein_id="AAI57867.1"
/db_xref="GeneID:729238"
/db_xref="HGNC:HGNC:10799"
/db_xref="MIM:178642"
/translation="MWLCPLALNLILMAASGAACEVKDVCVGSPGIPGTPGSHGLPGR
DGRDGVKGDPGPPGPMGPPGETPCPPGNNGLPGAPGVPGERGEKGEAGERGPPGLPAH
LDEELQATLHDFRHQILQTRGALSLQGSIMTVGEKVFSSNGQSITFDAIQEACARAGG
RIAVPRNPEENEAIASFVKKYNTYAYVGLTEGPSPGDFRYSDGTPVNYTNWYRGEPAG
RGKEQCVEMYTDGQWNDRNCLYSRLTICEF"
BASE COUNT 322 a 418 c 423 g 295 t
ORIGIN
1 cagagaccca agcagctgga ggctctgtgt gtgggtcgct gatttcttgg agcctgaaaa
61 gaagcaggag cagcgactgg acccagagcc atgtggctgt gccctctggc cctcaacctc
121 atcttgatgg cagcctctgg tgctgcgtgc gaagtgaagg acgtttgtgt tggaagccct
181 ggtatccccg gcactcctgg atcccacggc ctgccaggca gggacgggag agatggtgtc
241 aaaggagacc ctggccctcc aggccccatg ggtccgcctg gagaaacacc atgtcctcct
301 gggaataatg ggctgcctgg agcccctggt gtccctggag agcgtggaga gaagggggag
361 gctggcgaga gaggccctcc agggcttcca gctcatctag atgaggagct ccaagccaca
421 ctccacgact tcagacatca aatcctgcag acaaggggag ccctcagtct gcagggctcc
481 ataatgacag taggagagaa ggtcttctcc agcaatgggc agtccatcac ttttgatgcc
541 attcaggagg catgtgccag agcaggcggc cgcattgctg tcccaaggaa tccagaggaa
601 aatgaggcca ttgcaagctt cgtgaagaag tacaacacat atgcctatgt aggcctgact
661 gagggtccca gccctggaga cttccgctac tcagatggga cccctgtaaa ctacaccaac
721 tggtaccgag gggagcctgc aggtcgggga aaagagcagt gtgtggagat gtacacagat
781 gggcagtgga atgacaggaa ctgcctgtac tcccgactga ccatctgtga gttctgagag
841 gcatttaggc catgggacag ggaggatcct gtctggcctt cagtttccat ccccaggatc
901 cacttggtct gtgagatgct agaactccct ttcaacagaa ttcacttgtg gctattagag
961 ctggaggcac ccttagccac ttcattcccc tgatgggccc tgactcttcc ccataatcac
1021 tgaccagcct tgacactccc cttgcaaacc atcccagcac tgcaccccag gcagccactc
1081 ctagccttgg cctttggcat gagatggagg cctccttatt ccccatctgg tccagttcct
1141 tcacttacag atggcagcag tgaggccttg gggtagaagg atcctccaaa gtcacacaga
1201 gtgcctgcct cctggtcccc tcagctctgc ctctgcagcc cactgcctgc ccagtgccat
1261 caggatgagc agtaccggcc aagcataatg acagagagag gcagatttca gggaagccct
1321 gactgtgtgg agctaaggac acagtggaga ttctctggca ctctgaggtc tctgtggcag
1381 gcctggtcag gctctccagg tggtcagagg gcccagtggt gccccagcac ggtggtgccc
1441 aagccaaccc tgtgactg
//