LOCUS BC157859 2004 bp mRNA linear HUM 08-JUL-2008
DEFINITION Homo sapiens WD repeat domain 42C, mRNA (cDNA clone MGC:189754
IMAGE:9057078), complete cds.
ACCESSION BC157859
VERSION BC157859.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2004)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2004)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-DEC-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 13 Row: D Column: 21.
FEATURES Location/Qualifiers
source 1..2004
/db_xref="H-InvDB:HIT000503414"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:189754 IMAGE:9057078"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CCCCTGCA"
gene 1..2004
/gene="WDR42C"
/db_xref="GeneID:347442"
/db_xref="HGNC:HGNC:31811"
CDS 88..1974
/gene="WDR42C"
/codon_start=1
/product="WDR42C protein"
/protein_id="AAI57860.1"
/db_xref="GeneID:347442"
/db_xref="HGNC:HGNC:31811"
/translation="MSHQEGSTDGLPDLGTESLFSSPEEQSGAVAATEASSDIDIATS
ELSVTVTGDGSDSRDGGFPNDASTENRSSDQESASEDIELESLEDFEHFLMSGESLFH
YPLVGEEETEREEEDEEIQEEGGEEEEEEEEEEEEEEEEEEEQPRAGPQGSGGNHEQY
SLEEDQALEEWVSSETSALPRPRWQVVTALHQRQLGSRPRFVYEACGARAFVQRFRLQ
YRLADHVGCVNTVHFNQRGTRLASSGDDLKVIVWDWVRQRPVLNFESGHTNNVFQAKF
LPNCGDSTLAMCARDGQVRVAELINASYFNNTKCVAQHRGPAHKLALEPDSPYKFLTS
GEDAVVFTIDLRQDRPASKVVVTRENDKKVGLYTITVNPANTYQFAVGGQDQFVRIYD
QRKIDKKENNGVLKKFTPHHLVNCDFPTNITCVVYSHDGTELLASYNDDDIYLFNSSH
SDGAQYSKRFKGHRNNTTVKGVNFYGPRSEFVVSGSDCGHIFFWEKSSCQIIQFLKGS
REGTINCLEPHPYLPVLACSGLDHDVKIWTPTAKAATELTGLKKVIKKNKWERDEDSL
HHGSLFDQYMLWFLLRHVTQRGRHQDWRSGEAEFPDEESDESSSTSETSEEEVQDRVQ
CMPS"
BASE COUNT 551 a 456 c 560 g 437 t
ORIGIN
1 tcctaaccgc aggccaactt tcttcccaga gcttttaggg gcctggcctt tgcagttcca
61 gatctactac agcaaacatc gttcaagatg tcccaccaag aaggcagcac agacggctta
121 ccagacttag ggactgaaag cctgttcagc agcccagagg agcagtctgg agccgtggcg
181 gcgacagagg cctcctcaga cattgacata gcgacctcag agctgagtgt gacagtgacc
241 ggagatggca gtgatagcag ggatggtgga ttccccaacg atgccagcac agaaaatcga
301 agctcagacc aagaaagcgc aagtgaagac atcgaacttg agagcttgga ggactttgag
361 catttcctca tgagtggtga aagtttattc cattaccctt tagtgggaga ggaggagaca
421 gaaagggagg aggaagacga agagatacaa gaggagggag gggaggagga ggaagaggag
481 gaggaggagg aggaggagga ggaggaggag gaagaagaac agcctcgggc gggtccacaa
541 ggcagtggcg gcaaccatga gcagtattcg ttagaggagg atcaggcgct ggaggagtgg
601 gtttcctcag agacatctgc cctgccccga cctcgctggc aggtcgttac tgctcttcac
661 cagcggcagc tgggttcacg tccccgcttt gtatatgagg cctgtggggc aagagccttt
721 gtgcagcgtt tccgcctgca atatcgtctt gcagaccatg tcggctgtgt caatactgta
781 cactttaacc agcgtggcac ccggctggcc agtagcggtg atgacctaaa ggtgatagtg
841 tgggactggg tgcggcagag gccagtactg aactttgaaa gtggtcacac aaataatgtc
901 ttccaggcca agttccttcc taactgtggt gattccactc tggccatgtg tgcccgtgat
961 gggcaggtac gggtagcaga gttaattaat gcatcatatt tcaacaatac taagtgtgtg
1021 gcccagcaca ggggacctgc ccacaagttg gctctggagc ctgactctcc ttataagttc
1081 ctcacttcag gtgaagatgc tgttgtcttc accattgacc tcagacaaga ccggccagct
1141 tcaaaagttg tggtaacaag agaaaatgat aagaaagtgg gactgtatac aattactgtg
1201 aatcccgcca atacctacca atttgcagtg ggtggacaag atcagtttgt aaggatttat
1261 gaccagagga aaattgataa gaaagaaaac aatggcgtgc tcaagaaatt cactcctcat
1321 catctggtta attgtgattt cccaacaaac atcacctgcg ttgtgtacag ccacgatggc
1381 acagagctgc tagccagcta caatgatgac gatatttacc tcttcaactc ctctcacagt
1441 gatggtgctc aatacagtaa gagatttaag ggacacagaa ataataccac agtcaaaggt
1501 gttaatttct atggccccag gagtgagttt gtagtgagcg gtagtgattg cgggcacatc
1561 ttcttctggg agaaatcatc ctgccaaatc atccagttcc taaaggggag cagagaaggt
1621 acaataaact gtcttgaacc ccacccttac ctacctgtgt tggcgtgcag tggcctagat
1681 catgatgtca agatctggac acccacagct aaagctgcca ctgagcttac tgggttaaag
1741 aaggtgatta agaagaacaa gtgggaacga gatgaagaca gcttgcacca tggcagcctg
1801 tttgaccagt acatgctttg gttcctcctg cgtcacgtga cgcagagagg tcgtcaccag
1861 gactggagaa gtggtgaagc tgaatttcca gatgaagaat cggatgagtc ttccagcact
1921 tcagagacat ctgaggagga ggtccaagac cgagtgcagt gcatgccatc ctgaaggcct
1981 catatccagt ccagctacat gcca
//