LOCUS BC157833 1391 bp mRNA linear HUM 10-JUN-2008
DEFINITION Homo sapiens zinc finger and BTB domain containing 42, mRNA (cDNA
clone MGC:189728 IMAGE:9057052), complete cds.
ACCESSION BC157833
VERSION BC157833.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1391)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1391)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (24-DEC-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 684 Row: o Column: 2.
FEATURES Location/Qualifiers
source 1..1391
/db_xref="H-InvDB:HIT000503388"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:189728 IMAGE:9057052"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_287"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CCCGGTTT"
gene 1..1391
/gene="ZBTB42"
/db_xref="GeneID:664720"
/db_xref="HGNC:HGNC:32550"
CDS 28..1296
/gene="ZBTB42"
/codon_start=1
/product="ZBTB42 protein"
/protein_id="AAI57834.1"
/db_xref="GeneID:664720"
/db_xref="HGNC:HGNC:32550"
/translation="MEFPEHGGRLLGRLRQQRELGFLCDCTVLVGDARFPAHRAVLAA
CSVYFHLFYRDRPAGSRDTVRLNGDIVTAPAFGRLLDFMYEGRLDLRSLPVEDVLAAA
SYLHMYDIVKVCKGRLQEKDRSLDPGNPAPGAEPAQPPCPWPVWTADLCPAARKAKLP
PFGVKAALPPRASGPPPCQVPEESDQALDLSLKSGPRQERVHPPCVLQTPLCSQRQPG
AQPLVKDERDSLSKQEESSSSRSPHSPPKPPPVPAAKGLVVGLQPLPLSGEGSRELEL
GAGRLASEDELGPGGPLCICPLCSKLFPSSHVLQLHLSAHFRERDSTRARLSPDGVAP
TCPLCGKTFSCTYTLKRHERTHSGEKPYTCVQCGKSFQYSHNLSRHTVVHTREKPHAC
RWCERRFTQSGDLYRHVRKFHCGLVKSLLV"
BASE COUNT 236 a 469 c 454 g 232 t
ORIGIN
1 ttgtgcccag gtgatgacgg cggcggcatg gagttccctg agcacggcgg acggctgctg
61 ggccgcctga ggcagcagcg cgagctgggc ttcctatgcg actgcaccgt gctggtgggc
121 gacgcgcgct tcccggccca ccgtgccgtg ctggccgcgt gcagcgtcta cttccatctc
181 ttctacaggg accggcccgc gggcagtcgc gacacggtgc ggctcaacgg cgacatcgtc
241 acggcgcccg ccttcggccg cctactggac ttcatgtacg agggccgcct ggacctgcgc
301 agcctgcctg tggaggacgt cctggcagcc gccagctacc tgcacatgta tgacatcgtc
361 aaggtctgca agggcaggct ccaggagaag gatcgaagtc tggacccggg gaaccctgcc
421 cctggggcag aacctgctca gccaccgtgc ccctggcctg tctggaccgc ggacctctgc
481 ccagctgccc gaaaggccaa gctccccccg tttggggtca aggctgccct ccctcctcga
541 gcatctgggc ctcctccctg ccaggtccca gaagagtcag accaggccct ggacctgtcg
601 ttgaagtctg gcccaaggca ggagcgggtc cacccaccgt gcgtcctcca gacacccctc
661 tgcagccaga ggcagccagg ggcccagcca ctggtgaagg acgaacggga ctcactgtcc
721 aaacaggagg agagcagcag ctctaggagc ccccacagtc ccccgaagcc acctcctgtt
781 cctgcagcca agggcctggt ggtgggcttg cagccgctgc ccctcagcgg agagggcagc
841 cgggagctgg agcttggtgc agggcgactg gcgagtgagg acgagctggg gcctggtggg
901 cccctctgca tctgcccgtt gtgcagcaag ctgtttccca gctcccacgt gctgcagctg
961 cacctcagtg cccacttccg tgagcgagac agcacccggg cccggctctc acccgacggc
1021 gtggcaccca cctgcccgct ctgtgggaag accttctcgt gcacatacac actgaagagg
1081 cacgagcgga cacactcggg tgagaagccc tatacgtgtg tgcagtgtgg caaaagtttt
1141 cagtactccc acaacctgag ccggcacacc gtagtgcaca ctcgagagaa gccgcatgcc
1201 tgccggtggt gtgagcgccg tttcacgcag tccggggacc tctaccgcca cgtccgcaag
1261 tttcactgtg gcctcgtcaa gtcccttctg gtgtgatgca tccctgtggg tcctgagggt
1321 ggggtggaag ggaagggatg ggccctccca ggtgggacac agcatggggt gtgaagcctg
1381 accaggtgga g
//