LOCUS BC154414 5099 bp mRNA linear HUM 06-NOV-2007
DEFINITION Homo sapiens zinc finger protein 12, mRNA (cDNA clone MGC:165097
IMAGE:40148925), complete cds.
ACCESSION BC154414
VERSION BC154414.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5099)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5099)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-NOV-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Novartis Institute for Biomedical Research
cDNA Library Preparation: Novartis Institute for Biomedical
Research
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 306 Row: p Column: 4.
FEATURES Location/Qualifiers
source 1..5099
/db_xref="H-InvDB:HIT000436113"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:165097 IMAGE:40148925"
/tissue_type="Donated clones,Novartis FGA collection"
/clone_lib="NIH_MGC_417"
/lab_host="DH5a"
/note="Vector: pCMV-SPORT6"
gene 1..5099
/gene="ZNF12"
/gene_synonym="GIOT-3"
/gene_synonym="HZF11"
/gene_synonym="KOX3"
/db_xref="GeneID:7559"
/db_xref="HGNC:HGNC:12902"
/db_xref="MIM:194536"
CDS 543..2636
/gene="ZNF12"
/gene_synonym="GIOT-3"
/gene_synonym="HZF11"
/gene_synonym="KOX3"
/codon_start=1
/product="zinc finger protein 12"
/protein_id="AAI54415.1"
/db_xref="GeneID:7559"
/db_xref="HGNC:HGNC:12902"
/db_xref="MIM:194536"
/translation="MNKSLGPVSFKDVAVDFTQEEWQQLDPEQKITYRDVMLENYSNL
VSVGYHIIKPDVISKLEQGEEPWIVEGEFLLQSYPDEVWQTEDLIERIQEEENKPSRQ
TVFIETLIEERGNVPGKTFDVETNPVPSRKIAYKNSLCDSCEKCLTSVSEYISSDGSY
ARMKADECSGCGKSLLHIKLEKTHPGDQAYEFNQNGEPYTLNEESLYQKIRILEKPFE
YIECQKAFQKDTVFVNHMEEKPYKWNGSEIAFLQMSDLTVHQTSHMEMKPYECSECGK
SFCKKSKFIIHQRTHTGEKPYECNQCGKSFCQKGTLTVHQRTHTGEKPYECNECGKNF
YQKLHLIQHQRTHSGEKPYECSYCGKSFCQKTHLTQHQRTHSGERPYVCHDCGKTFSQ
KSALNDHQKIHTGVKLYKCSECGKCFCRKSTLTTHLRTHTGEKPYECNECGKFFSRLS
YLTVHYRTHSGEKPYECNECGKTFYLNSALMRHQRVHTGEKPYECNECGKLFSQLSYL
TIHHRTHSGVKPYECSECGKTFYQNSALCRHRRIHKGEKPYECYICGKFFSQMSYLTI
HHRIHSGEKPYECSECGKTFCQNSALNRHQRTHTGEKAYECYECGKCFSQMSYLTIHH
RIHSGEKPFECNECGKAFSRMSYLTVHYRTHSGEKPYECTECGKKFYHKSAFNSHQRI
HRRGNMNVIDVGRLL"
BASE COUNT 1598 a 1003 c 1111 g 1387 t
ORIGIN
1 ccaggtcacc gctcgcccta gttcccaggc tttggcctcc ggtgggcgag aatcgcggag
61 cctgcggggc tgggcgccga agagccgggc cggcacccaa gcgggcgcgg ggctgtgcgg
121 gccaggcgga ggctcaagcg gggatccccg agcacgaccc ccggagccga cggcgctggg
181 gcccaagggg ccggccgggc ggtgacgacg gcggaggcga aggggcggcg ggacccgggc
241 ccggcccgtg tgcgtcctcg acggcccggc cccggctccg caggacggtg agccccaggg
301 agacggatct gggctccggg agggacgccc cgcctggatt tgtcccgtaa gcccggcccg
361 ggcccctctg gagcagaacg gccttggtga ggtggacagg aagggacctc gcgagcagac
421 gcgcgcccgc gacagcaatc ccgccccggc ctgtcgggag cggtggggca gaggctgcgg
481 agccccagga ggatctgcct ccgctttcac agtcctccag atttttccaa gagcagcaga
541 aaatgaataa atccctgggg ccagtgtcat tcaaggacgt ggctgtggac ttcacccagg
601 aggaatggca gcagctggat cctgagcaga agataactta cagggatgtg atgctggaga
661 actacagcaa tctagtttct gtggggtatc acattatcaa accggatgtt atcagcaagt
721 tggagcaagg agaagagcca tggatagtag aaggagaatt cctacttcag agctatccag
781 atgaagtctg gcaaactgag gacctaatag agagaatcca ggaagaggaa aataaacctt
841 caaggcaaac tgtgttcatt gagaccctga ttgaagagag agggaatgtt cctggtaaaa
901 cttttgatgt agaaacgaac cctgttcctt caagaaaaat agcctataaa aatagcctct
961 gtgactcatg tgaaaagtgt ttaacgtctg tttcagaata tattagtagt gatggaagct
1021 atgcaagaat gaaagctgat gaatgtagtg gatgtgggaa atcactcctc catattaagc
1081 ttgagaaaac tcatccagga gatcaagctt atgaatttaa tcaaaatggg gaaccttata
1141 ctctaaatga agaaagtctt tatcagaaaa ttcgtatttt ggagaaacct tttgaatata
1201 ttgaatgcca gaaagccttc caaaaggaca ctgtttttgt taatcacatg gaagaaaagc
1261 cctataagtg gaatggatct gaaatagcct ttctccagat gtcggacctc actgtacatc
1321 agacatctca tatggaaatg aagccctatg aatgcagtga atgtgggaaa tccttctgta
1381 aaaagtcaaa atttattata catcagagga ctcacacagg agagaaacct tacgaatgta
1441 atcagtgtgg gaaatccttc tgccagaagg gaacccttac tgtgcatcag agaacacaca
1501 caggggagaa gccctatgaa tgtaatgaat gtgggaagaa cttttaccag aagttacacc
1561 tcattcagca tcagagaact cactcaggag agaagcccta tgaatgtagt tattgtggaa
1621 aatccttttg ccagaagaca cacctcacac aacatcagag aacacattca ggagagagac
1681 cttatgtttg tcatgactgt gggaaaacct tctcgcagaa gtcagcactt aatgaccatc
1741 agaaaattca cacaggtgtg aaactctaca agtgtagtga atgtgggaaa tgcttctgcc
1801 gcaagtctac tctcacgacc cacctgagga cccacacagg agagaaaccg tatgaatgta
1861 atgagtgtgg aaaattcttc tctcggttgt catatctcac tgtacattat agaactcatt
1921 caggagagaa accctatgaa tgtaatgaat gtggaaaaac cttctacctg aattcagccc
1981 tcatgagaca tcagagagtg cacacaggag agaaacctta cgaatgtaat gaatgtggaa
2041 agttattctc ccagttgtca tacctcacta tccatcatag aactcattca ggagtaaaac
2101 cctatgaatg tagtgaatgt gggaaaacct tctaccagaa ctcagccctt tgtagacatc
2161 ggagaataca caaaggagag aagccctatg aatgctatat atgtggaaaa ttcttctctc
2221 agatgtcata cctcactata catcatagaa ttcattcagg agagaagccc tatgaatgta
2281 gtgaatgtgg gaaaaccttc tgccagaatt cagcccttaa tcgacatcag agaacacaca
2341 caggagagaa agcctacgaa tgttatgaat gtgggaagtg cttctctcag atgtcctatc
2401 tcactataca tcatcgaatt cattcaggag agaaaccctt tgaatgtaat gagtgtggaa
2461 aagccttctc tcggatgtca tacctcactg tacattatag aactcattca ggagagaaac
2521 cctatgagtg tactgaatgt ggaaaaaaat tctaccacaa atcagcattc aacagccatc
2581 agagaattca taggagaggc aatatgaatg taatagatgt gggaaggctt ctctgaagtc
2641 agacctcatt ttatatcaga gaaccctttc agtatagtga atcagaaact cctgcctgaa
2701 gtcaaacacc ttgtacatca gagagttcac acaggttagt gtggacatcc ccttgtgtgt
2761 tggactcata atctgaagac tcacagaatg gaaaccatga ttataacaag accacatggt
2821 ataacaatac tagactatag acaagtaaaa atttataaat attaagaatg tatatacatg
2881 tcaccatgga ttggaactgt tttgcatatc agggaaatca tagccaaggg gaaatctatc
2941 agtataagga atgtggaaga cataatcctt tggaaactgt taatactaaa agatatgttt
3001 ctgatacaat agcaaacttg aaaaaaaaaa aaagaaatag aagattcctg ctgtgaataa
3061 acatacttct tgtgtaaata gaaactgtaa agtcatcagg atagctagtt aagtcggtaa
3121 ccttaaactc atgtaagcag ttcccaaaga acataggact tatgtttggg gagagggttg
3181 tttttattac agtacattac aggaattgta tgttcacttc gaatcatgtt tgaaaaaacg
3241 ttgtatcctt attaattttg taattcatat agtaagagta ttctaaacag cactacatta
3301 atatcatttg ataggtataa agtatacttt ttcttgcact cttctctagg atttaatgca
3361 ttgatcattc ttaatgaaca atatcagctc taaaggacca atgcttttat aatgttttca
3421 actgtatctg agtcagccag agagataaat atccatgtat aaaatagata gaaaactttg
3481 cttaggtaat ttaaaattaa taatgccagt tttccaagag tgagaaaatc attgcactct
3541 gtacagtttt aagatatact taaaatattc ccatttgtat ctattttttt ttctactgtt
3601 ttttatttgg acacttacat aacagtgcag agcacaatgc tgtgtaacat aggaattcac
3661 tgtgttttca tttgatgtcg tactggtttt aaaccttgtg ctctactcct tcctgttaat
3721 gaattaagaa cacattctaa caagggtctg tggcagacat tgccgagtga ctttctaaca
3781 taggaattca ctgtgttttc atttgatgtc gtactggttt taaaccttgt gctctactcc
3841 ttcctgttaa tgaattaaga acacattcta acaagggtct gtggcagaca ttgccgagtg
3901 actttcttag tcactccctt actctgctgg cggagtttgg ttatccattt atcctcaaaa
3961 ggaagtgaga taaatcctga ttagttttaa ccagtgacac tccccttctc gttgccagca
4021 gttgatttac agtggtcaca gggcccaatt ctagacataa aacaaaggat atacctgaca
4081 gactacttct ggaaaaggtt ttctcaaagg cccaaggatt caagcaaagg gaagtggaat
4141 cttgtggtga acagtacctt gtctggatgt ggtgcctggt aaccatcttt cagcaatgga
4201 ttatagttta atcatggcct gagcagaaat actgaaagac cctgagacct ggatgatgtc
4261 tttgagccac caaaccaagc agccttgtag ccactcctcc tttggactgt ttcttttgtg
4321 agagactaaa cttattttta agccagttga tttaggatgc tctattacta ataactgaag
4381 acattctaat tggtacagac tgaaaccttt ataggagtta tgcagttcag aagtggactt
4441 taggtaagtc atttatttta agctgttgat atagagattt attttctgta aattttgacg
4501 taaatagttt gagcattaga aatcaacttg aaacaataaa atgtatgctt ccttgaactg
4561 tcatatcgtt gacctgcaaa attcaccttt ggaacgtgac acaatgttag gcatacctcc
4621 ttttttctaa tacatggaat acattttgtt ggaggtaatt tatgtgattc atataccact
4681 gctacagtgt tagctgacaa catatagtat gaggtaagga tctaattctg tttcctctca
4741 catgattact tgatagctaa gcatctgatt ggtttactgc tttaccactg agctgaaatg
4801 ccgtgttttc catttattaa aatcacacat ggctcctgtt tttgtcactc agcacttttt
4861 ctccatattc ttcaagacga ttgtgagtat ggtacgtaac aggaattaca tctggtaagt
4921 tgtatagttt tgtgtaggaa ctctatattc atagcatatt tgtggaaatg atacctatgg
4981 aggtttctca cactggtgtg tcattataca ttaattgtac aatatgcatt ttcagtaaaa
5041 tatttgaaaa ctgtaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//