LOCUS BC152457 4164 bp mRNA linear HUM 23-AUG-2007
DEFINITION Homo sapiens neurexin 3, mRNA (cDNA clone MGC:176711
IMAGE:8862590), complete cds.
ACCESSION BC152457
VERSION BC152457.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4164)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4164)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-AUG-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Kazusa DNA Research Inst.
cDNA Library Preparation: Kazusa DNA Research Institute
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCF Plate: 15 Row: g Column: 12.
FEATURES Location/Qualifiers
source 1..4164
/db_xref="H-InvDB:HIT000436048"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:176711 IMAGE:8862590"
/tissue_type="Clones donated by Kazusa DNA Research Inst."
/clone_lib="Kazusa-KIAA-pBluescriptIISK+"
/lab_host="DH5alpha T1-resistant"
/note="Vector: pBluescript II SK+; Clone identification
sequence tag: NA"
gene 1..4164
/gene="NRXN3"
/db_xref="GeneID:9369"
/db_xref="HGNC:HGNC:8010"
/db_xref="MIM:600567"
CDS 492..3677
/gene="NRXN3"
/codon_start=1
/product="neurexin 3"
/protein_id="AAI52458.1"
/db_xref="GeneID:9369"
/db_xref="HGNC:HGNC:8010"
/db_xref="MIM:600567"
/translation="MLGSDDFFYVGGSPSTADLPGSPVSNNFMGCLKEVVYKNNDIRL
ELSRLARIADTKMKIYGEVVFKCENVATLDPINFETPEAYISLPKWNTKRMGSISFDF
RTTEPNGLILFTHGKPQERKDARSQKNTKVDFFAVELLDGNLYLLLDMGSGTIKVKAT
QKKANDGEWYHVDIQRDGRSGTISVNSRRTPFTASGESEILDLEGDMYLGGLPENRAG
LILPTELWTAMLNYGYVGCIRDLFIDGRSKNIRQLAEMQNAAGVKSSCSRMSAKQCDS
YPCKNNAVCKDGWNRFICDCTGTGYWGRTCEREASILSYDGSMYMKIIMPMVMHTEAE
DVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGPETL
YAGQKLNDNEWHTVRVVRRGKSLKLTVDDDVAEGTMVGDHTRLEFHNIETGIMTEKRY
ISVVPSSFIGHLQSLMFNGLLYIDLCKNGDIDYCELKARFGLRNIIADPVTFKTKSSY
LSLATLQAYTSMHLFFQFKTTSPDGFILFNSGDGNDFIAVELVKGYIHYVFDLGNGPN
VIKGNSDRPLNDNQWHNVVITRDNSNTHSLKVDTKVVTQVINGAKNLDLKGDLYMAGL
AQGMYSNLPKLVASRDGFQGCLASVDLNGRLPDLINDALHRSGQIKRGCEGPSTTCQE
DSCANQGVCMQQWEGFTCDCSMTSYSGNQCNDPGATYIFGKSGGLILYTWPANDRPST
RSDRLAVGFSTTVKDGILVRIDSAPGLGDFLQLHIEQGKIGVVFNIGTVDISIKEERT
PVNDGKYHVVRFTRNGGNATLQVDNWPVNEHYPTGRQLTIFNTQAQIAIGGKDKGRLF
QGQLSGLYYDGLKVLNMAAENNPNIKINGSVRLVGEVPSILGTTQTTSMPPEMSTTVM
ETTTTMATTTTRKNRSTASIQPTSDDLVSSAECSSDDEDFVECEPSTANPTEPGIRRV
PGASEVIRESSSTTGMVVGIVAAAALCILILLYAMYKYRNRDEGSYQVDETRNYISNS
AQSNGTLMKEKQQSSKSGHKKQKNKDREYYV"
BASE COUNT 1088 a 1063 c 1076 g 937 t
ORIGIN
1 caggactgga gggcttgagg aatgtggtgg tccctctctt cgttgtttct gcccactgag
61 gttgtgcttt ctcagggata tgcactctgc acttccattc ctgcagtgaa attaactcga
121 gcttggcagc tcgagaggag aatgtggcca ctttccgagg ctcagagtat ctgtgctacg
181 acctgtctca gaacccgatc cagagcagca gtgatgaaat caccctctcc tttaagacct
241 ggcagcgtaa cggcctcatc ctgcacacgg gcaagtcggc tgactatgtc aacctggctc
301 tgaaggatgg tgcggtctcc ttggtcatta acctggggtc cggggccttt gaggccattg
361 tggagccagt gaatggaaaa ttcaacgaca acgcctggca tgatgtcaaa gtgacacgca
421 acctccggca ggtgacaatc tctgtggatg gcattcttac cacgacgggc tacactcaag
481 aggactatac catgctgggc tcggacgact tcttctatgt aggaggaagc ccaagtaccg
541 ctgacttgcc tggctcccct gtcagcaaca acttcatggg ctgccttaaa gaggttgttt
601 ataagaataa tgacatccgt ctggagctgt ctcgcctggc ccggattgcg gacaccaaga
661 tgaaaatcta tggcgaagtt gtgtttaagt gtgagaatgt ggccacactg gaccccatca
721 actttgagac cccagaggct tacatcagct tgcccaagtg gaacactaaa cgtatgggct
781 ccatctcctt tgacttccgc accacagagc ccaatggcct gatcctcttc actcatggaa
841 agccccaaga gaggaaggat gctcggagcc agaagaatac aaaagtagac ttctttgccg
901 tggaactcct cgatggcaac ctgtacttgc tgcttgacat gggctctggc accatcaaag
961 tgaaagccac tcagaagaaa gccaatgatg gggaatggta ccatgtggac attcagcgag
1021 atggcagatc aggtactata tcagtgaaca gcaggcgcac gccattcacc gccagtgggg
1081 agagcgagat cctggacctg gaaggagaca tgtacctggg agggctgccg gagaaccgtg
1141 ctggccttat tctccccacc gagctgtgga ctgccatgct caactatggc tacgtgggct
1201 gcatccgcga cctattcatt gatgggcgca gcaagaacat tcgacagctg gcagagatgc
1261 agaatgctgc gggtgtcaag tcctcctgtt cacggatgag tgccaagcag tgtgacagct
1321 acccctgcaa gaataatgct gtgtgcaagg acggctggaa ccgcttcatc tgcgactgca
1381 ccggcaccgg atactgggga agaacctgcg aaagggaggc atccatcctg agctatgatg
1441 gtagcatgta catgaagatc atcatgccca tggtcatgca tactgaggca gaggatgtgt
1501 ccttccgctt catgtcccag cgagcttatg ggctgctggt ggctacgacc tccagggact
1561 ctgccgacac cctgcgtctg gagctggatg gggggcgtgt caagctcatg gttaacttag
1621 actgtatcag gataaactgt aactccagca aaggaccaga gaccttgtat gcagggcaga
1681 agctcaatga caacgagtgg cacaccgttc gggtggtgcg gagaggaaaa agccttaagt
1741 taaccgtgga tgatgatgtg gctgagggta caatggtggg agaccatacc cgtttggagt
1801 tccacaacat tgaaacggga atcatgactg agaaacgcta catctccgtt gtcccctcca
1861 gctttattgg ccatctgcag agcctcatgt ttaatggcct tctctacatt gacttgtgca
1921 aaaatggtga cattgattat tgtgagctga aggctcgttt tggactgagg aacatcatcg
1981 ctgaccctgt cacctttaag accaagagca gctacctgag ccttgccact cttcaggctt
2041 acacctccat gcacctcttc ttccagttca agaccacctc accagatggc ttcattctct
2101 tcaatagtgg tgatggcaat gacttcattg cagtcgagct tgtcaagggg tatatacact
2161 acgtttttga cctcggaaac ggtcccaatg tgatcaaagg caacagtgac cgccccctga
2221 atgacaacca gtggcacaat gtcgtcatca ctcgggacaa tagtaacact catagcctga
2281 aagtggacac caaagtggtc actcaggtta tcaatggtgc caaaaatctg gatttgaaag
2341 gtgatctcta tatggctggt ctggcccaag gcatgtacag caacctccca aagctcgtgg
2401 cctctcgaga tggctttcag ggctgtctag catcagtgga cttgaatgga cgcctgccag
2461 acctcatcaa tgatgctctt catcggagcg gacagatcaa gcgtggctgt gaaggaccca
2521 gtaccacctg ccaggaagat tcatgtgcca accagggggt ctgcatgcaa caatgggagg
2581 gcttcacctg tgattgttct atgacctctt attctggaaa ccagtgcaat gatcctggcg
2641 ctacgtacat ctttgggaaa agtggtgggc ttatcctcta cacctggcca gccaatgaca
2701 ggcccagcac gcggtctgac cgccttgccg tgggcttcag caccactgtg aaggatggca
2761 tcttggtccg catcgacagt gctccaggac ttggtgactt cctccagctt cacatagaac
2821 aggggaaaat tggagttgtc ttcaacattg gcacagttga catctccatc aaagaggaga
2881 gaacccctgt aaatgacggc aaataccatg tggtacgctt caccaggaac ggcggcaacg
2941 ccaccctgca ggtggacaac tggccagtga atgaacatta tcctacaggc cggcagttaa
3001 ccatcttcaa cactcaggcg caaatagcca ttggtggaaa ggacaaagga cgcctcttcc
3061 aaggccaact ctctgggctc tattatgatg gtttgaaagt actgaacatg gcggctgaga
3121 acaaccccaa tattaaaatc aatggaagtg ttcggctggt tggagaagtc ccatcaattt
3181 tgggaacaac acagacgacc tccatgccac cagaaatgtc tactactgtc atggaaacca
3241 ctactacaat ggcgactacc acaacccgta agaatcgctc tacagccagc attcagccaa
3301 catcagatga tcttgtttca tctgctgaat gttcaagtga tgatgaagac tttgttgaat
3361 gtgagccgag tacagcaaac cccacggagc cgggaatcag acgggttccg ggggcctcag
3421 aggtgatccg ggagtcgagc agcacaacag ggatggtcgt cggcattgtg gctgctgccg
3481 ccctctgcat cttgatcctc ctgtacgcca tgtacaagta caggaacagg gacgaggggt
3541 cctatcaagt ggacgagacg cggaactaca tcagcaactc cgcccagagc aacggcacgc
3601 tcatgaagga gaagcagcag agctcgaaga gcggccacaa gaaacagaaa aacaaggaca
3661 gggagtatta cgtgtaaaca tgcgaacact gctcacacgc gagttttcac agttatttct
3721 atccacgcct atgaatcttt ggacggtgag atctcacaga tgtcagaact gctggaacta
3781 tgaaatgggg tatataacca cgactctggt ggggaaaacc gttttttaaa ggacacacac
3841 acacacagcg atgcatctct ctctaaagct cagccacggc tgcggcaagg tcccagcggt
3901 cgctgggaga cagaaggttt tgtgccctgc tgtatcataa agcacacact tagcgctctg
3961 gagccggacg gtggctccac cacttccgca ggcctagaaa cttccttctc cggaggacct
4021 tttactaaaa ggtagaagac ttcatggctt acttgttcca taactccaag tgagtctgta
4081 atgtttgtga agcttgactg taaccatgtt ttttctgttt aattatgtaa aaaacaaaac
4141 tacaacaaca aaaaaaaaaa aaaa
//