LOCUS BC152454 6175 bp mRNA linear HUM 23-AUG-2007
DEFINITION Homo sapiens prostaglandin F2 receptor negative regulator, mRNA
(cDNA clone MGC:176708 IMAGE:8862587), complete cds.
ACCESSION BC152454
VERSION BC152454.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6175)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 6175)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-AUG-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Kazusa DNA Research Inst.
cDNA Library Preparation: Kazusa DNA Research Institute
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCF Plate: 15 Row: g Column: 9.
FEATURES Location/Qualifiers
source 1..6175
/db_xref="H-InvDB:HIT000436045"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:176708 IMAGE:8862587"
/tissue_type="Clones donated by Kazusa DNA Research Inst."
/clone_lib="Kazusa-KIAA-pBluescriptIISK+"
/lab_host="DH5alpha T1-resistant"
/note="Vector: pBluescript II SK+; Clone identification
sequence tag: NA"
gene 1..6175
/gene="PTGFRN"
/gene_synonym="CD315"
/gene_synonym="CD9P-1"
/gene_synonym="EWI-F"
/gene_synonym="FPRP"
/gene_synonym="SMAP-6"
/db_xref="GeneID:5738"
/db_xref="HGNC:HGNC:9601"
/db_xref="MIM:601204"
CDS 138..2777
/gene="PTGFRN"
/gene_synonym="CD315"
/gene_synonym="CD9P-1"
/gene_synonym="EWI-F"
/gene_synonym="FPRP"
/gene_synonym="SMAP-6"
/codon_start=1
/product="prostaglandin F2 receptor negative regulator"
/protein_id="AAI52455.1"
/db_xref="GeneID:5738"
/db_xref="HGNC:HGNC:9601"
/db_xref="MIM:601204"
/translation="MGRLASRPLLLALLSLALCRGRVVRVPTATLVRVVGTELVIPCN
VSDYDGPSEQNFDWSFSSLGSSFVELASTWEVGFPAQLYQERLQRGEILLRRTANDAV
ELHIKNVQPSDQGHYKCSTPSTDATVQGNYEDTVQVKVLADSLHVGPSARPPPSLSLR
EGEPFELRCTAASASPLHTHLALLWEVHRGPARRSVLALTHEGRFHPGLGYEQRYHSG
DVRLDTVGSDAYRLSVSRALSADQGSYRCIVSEWIAEQGNWQEIQEKAVEVATVVIQP
SVLRAAVPKNVSVAEGKELDLTCNITTDRADDVRPEVTWSFSRMPDSTLPGSRVLARL
DRDSLVHSSPHVALSHVDARSYHLLVRDVSKENSGYYYCHVSLWAPGHNRSWHKVAEA
VSSPAGVGVTWLEPDYQVYLNASKVPGFADDPTELACRVVDTKSGEANVRFTVSWYYR
MNRRSDNVVTSELLAVMDGDWTLKYGERSKQRAQDGDFIFSKEHTDTFNFRIQRTTEE
DRGNYYCVVSAWTKQRNNSWVKSKDVFSKPVNIFWALEDSVLVVKARQPKPFFAAGNT
FEMTCKVSSKNIKSPRYSVLIMAEKPVGDLSSPNETKYIISLDQDSVVKLENWTDASR
VDGVVLEKVQEDEFRYRMYQTQVSDAGLYRCMVTAWSPVRGSLWREAATSLSNPIEID
FQTSGPIFNASVHSDTPSVIRGDLIKLFCIITVEGAALDPDDMAFDVSWFAVHSFGLD
KAPVLLSSLDRKGIVTTSRRDWKSDLSLERVSVLEFLLQVHGSEDQDFGNYYCSVTPW
VKSPTGSWQKEAEIHSKPVFITVKMDVLNAFKYPLLIGVGLSTVIGLLSCLIGYCSSH
WCCKKEVQETRRERRRLMSMEMD"
BASE COUNT 1452 a 1523 c 1660 g 1540 t
ORIGIN
1 ctcgcgagga gagcggagca ggcgcgcggc ccaggcggag gagcgccgac tctggagcag
61 ccggagctgg aagaggagga ggaggagagg cggcggggaa ggaggaggag ggggagagtc
121 gctcccgccg ggcgagcatg gggcgcctgg cctcgaggcc gctgctgctg gcgctcctgt
181 cgttggctct ttgccgaggg cgtgtggtga gagtccccac agcgaccctg gttcgagtgg
241 tgggcactga gctggtcatc ccctgcaacg tcagtgacta tgatggcccc agcgagcaaa
301 actttgactg gagcttctca tctttgggga gcagctttgt ggagcttgca agcacctggg
361 aggtggggtt cccagcccag ctgtaccagg agcggctgca gaggggcgag atcctgttaa
421 ggcggactgc caacgacgcc gtggagctcc acataaagaa cgtccagcct tcagaccaag
481 gccactacaa atgttcaacc cccagcacag atgccactgt ccagggaaac tatgaggaca
541 cagtgcaggt taaagtgctg gccgactccc tgcacgtggg ccccagcgcg cggcccccgc
601 cgagcctgag cctgcgggag ggggagccct tcgagctgcg ctgcactgcc gcctccgcct
661 cgccgctgca cacgcacctg gcgctgctgt gggaggtgca ccgcggcccg gccaggcgga
721 gcgtcctcgc cctgacccac gagggcaggt tccacccggg cctggggtac gagcagcgct
781 accacagtgg ggacgtgcgc ctcgacaccg tgggcagcga cgcctaccgc ctctcagtgt
841 cccgggctct gtctgccgac cagggctcct acaggtgtat cgtcagcgag tggatcgccg
901 agcagggcaa ctggcaggaa atccaagaaa aggccgtgga agttgccacc gtggtgatcc
961 agccatcagt tctgcgagca gctgtgccca agaatgtgtc tgtggctgaa ggaaaggaac
1021 tggacctgac ctgtaacatc acaacagacc gagccgatga cgtccggccc gaggtgacgt
1081 ggtccttcag caggatgcct gacagcaccc tacctggctc ccgcgtgttg gcgcggcttg
1141 accgtgattc cctggtgcac agctcgcctc atgttgcttt gagtcatgtg gatgcacgct
1201 cctaccattt actggttcgg gatgttagca aagaaaactc tggctactat tactgccacg
1261 tgtccctgtg ggcacccgga cacaacagga gctggcacaa agtggcagag gccgtgtctt
1321 ccccagctgg tgtgggtgtg acctggctag aaccagacta ccaggtgtac ctgaatgctt
1381 ccaaggtccc cgggtttgcg gatgacccca cagagctggc atgccgggtg gtggacacga
1441 agagtgggga ggcgaatgtc cgattcacgg tttcgtggta ctacaggatg aaccggcgca
1501 gcgacaatgt ggtgaccagc gagctgcttg cagtcatgga cggggactgg acgctaaaat
1561 atggagagag gagcaagcag cgggcccagg atggagactt tattttttct aaggaacata
1621 cagacacgtt caatttccgg atccaaagga ctacagagga agacagaggc aattattact
1681 gtgttgtgtc tgcctggacc aaacagcgga acaacagctg ggtgaaaagc aaggatgtct
1741 tctccaagcc tgttaacata ttttgggcat tagaagattc cgtgcttgtg gtgaaggcga
1801 ggcagccaaa gcctttcttt gctgccggaa atacatttga gatgacttgc aaagtatctt
1861 ccaagaatat taagtcgcca cgctactctg ttctcatcat ggctgagaag cctgtcggcg
1921 acctctccag tcccaatgaa acgaagtaca tcatctctct ggaccaggat tctgtggtga
1981 agctggagaa ttggacagat gcatcacggg tggatggcgt tgttttagaa aaagtgcagg
2041 aggatgagtt ccgctatcga atgtaccaga ctcaggtctc agacgcaggg ctgtaccgct
2101 gcatggtgac agcctggtct cctgtcaggg gcagcctttg gcgagaagca gcaaccagtc
2161 tctccaatcc tattgagata gacttccaaa cctcaggtcc tatatttaat gcttctgtgc
2221 attcagacac accatcagta attcggggag atctgatcaa attgttctgt atcatcactg
2281 tcgagggagc agcactggat ccagatgaca tggcctttga tgtgtcctgg tttgcggtgc
2341 actcttttgg cctggacaag gctcctgtgc tcctgtcttc cctggatcgg aagggcatcg
2401 tgaccacctc ccggagggac tggaagagcg acctcagcct ggagcgcgtg agtgtgctgg
2461 aattcttgct gcaagtgcat ggctccgagg accaggactt tggcaactac tactgttccg
2521 tgactccatg ggtgaagtca ccaacaggtt cctggcagaa ggaggcagag atccactcca
2581 agcccgtttt tataactgtg aagatggatg tgctgaacgc cttcaagtat cccttgctga
2641 tcggcgtcgg tctgtccacg gtcatcgggc tcctgtcctg tctcatcggg tactgcagct
2701 cccactggtg ttgtaagaag gaggttcagg agacacggcg cgagcgccgc aggctcatgt
2761 cgatggagat ggactaggct ggcccgggag gggagtgaca gagggacgtt ctaggagcaa
2821 ttggggcaag aagaggacag tgatatttta aaacaaagtg tgttacacta aaaaccagtc
2881 ctctctaatc tcaggtggga cttggcgctc tctcttttct gcatgtcaag ttctgagcgc
2941 ggacatgttt accagcacac ggctcttctt cccacggcac tttctgatgt aacaatcgag
3001 tgtgtgtttt cccaactgca gctttttaat ggttaacctt catctaattt tttttctccc
3061 actggtttat agatcctctg acttgtgtgt gtttatagct tttgtttcgc ggggttgtgg
3121 tgaggaaggg gtgatggcat gcggagttct ttatcttcag tgagaatgtg cctgcccgcc
3181 tgagagccag cttccgcgtt ggaggcacgt gttcagagag ctgctgagcg ccaccctcta
3241 cccggctgac agacaacaca gacctgtgcc gaaggctaat ttgtggcttt tacgacccta
3301 ccccaccccc tgttttcagg ggtttagact acatttgaaa tccaaacttg gagtatataa
3361 cttcttattg agcccaactg cttttttttt tttttttttt gcttctctgc cccttttcca
3421 tttcttttgt atttgttttc tgtgagagca ctgaaatggc agccctggaa tctacaattt
3481 ggctctccac tgagcacctt atcttgccac cttagcctta agaatgaata tgaagaaaaa
3541 tacacagcca cctctgtcca gggcagtaag aagggctgca aggaagggga ggatggggac
3601 aaggaaagga tcagatacct gctccagtag ttgtgaggcc actgtgtctc aggggactcc
3661 aggaggagca gaagagggat cccacgaagt tattcttacg cagctggggc caggagggtc
3721 agagtggtgc caggtgcaag ttaggctaaa gaagccacca ctattcctct ctcttgccca
3781 ttgtgggggg caaaggcatt ggtcaccaag agtcttgcag ggggacccac agatatgcca
3841 tgtccttcac acgtgcttgg gctccttaac ctgaaggcaa attgctactt gcaagactga
3901 ctgacttcaa ggaatcagaa attacctaga agcaccatgt tttttctatg accttttcag
3961 tccttcaggt cattttaagg tccactgcag ggggttagtg agaaagggta tactttgtgg
4021 tatgttttgc tttcctaata gggacatgaa ggaaacccag caatttgctg ttatgtgaat
4081 ggcctgtaga gcagagtcaa gagcggtgtg ctttgcccga ctgctcccat caggaatagg
4141 agagtagaca gagatcttcc acatcccagg cttctgctgc tgctttaaaa gctctgtcct
4201 tggagcctcc cgctccctga agtgtctcgc cccctgcaca gcactggcct ttcggaagca
4261 tcccagtagg gttttctgag gctcgctggt gactcatgcc ctaattgcaa tcctctgctt
4321 ttatcttgac tttgaaggat ctaacactgc tctctcttcc aaaggggaaa aaaagattca
4381 tttgttttga gcaataaact aatacaaaat gatggccatt catgtgcagc tctttgtcac
4441 catgggccgg atgagttgtg ctcctcctgg ctcaccattt ccccctgctc ccccacagcc
4501 ggttctgcac ttatcaccga gtcgcccctg gaagcagatt cccattgagt tttccccacc
4561 aaggggacca tgcacatggt agaaacatta gattctgcat tgacagtagc ctttccttgg
4621 cccgggcctg tggtgggaag acgggcaaca agtatacccc accagggcct gagtgactag
4681 aggaagagga cgaggccttg ttggcactag atttgggtat tttctgcatg tcataacata
4741 tcctaactgc tatttcagaa gaggcagctt gtaggtgatt gtacaagtga gaattaaaga
4801 gagaacagat atttaaacag gtgctgtatt agtaacagcc agtgcccttt cagcccttgc
4861 atctattaaa aggagattca ggattttatt ggcacaggcc cttcttagta ggaagaaagg
4921 gtgcttagct ttggacctga ccgggtgtgt gtaaaaccat ggactgagtc acagcagaca
4981 ctcgatggtg gtaaatgtga tgggtgctta cacactgtac cttttccttt catactgatg
5041 ctgcagttca gggctggagt tgttaaggca ttgacctcca cccacctgcc ccatgtccac
5101 tgggctgccc aagctgcatg tcacctgagg gctggcagga aggggcgaga aatcccaggg
5161 cattgtacca aggacctagt tccttctagg gatataaatt tccaggaatg tgtattttta
5221 atgtggtgag atgcactctt ttgttgtacc aaatagggct ccccacccca cccctgcgac
5281 aagtgctctt ctagaacagg ttcctaccag cagcactggt gtgaatgaaa gagagaccca
5341 gccgcgtctc acacaggtgg aattgcactt cttaacaaaa aggaacttta taaaagtttg
5401 ggattttttt tcctaatcat aaaaatagcc ccagaaagag cctaagctat gttcagatag
5461 aagcctcgaa attcctgtaa attgtttact ttatgatgtt tacatacacg tttcactttg
5521 aaaaaaaatg caaatcgact ttttaacaac tgttgagatg tttcatggga cagtagaact
5581 ctgactcacc aactgggcta aattttaatt taaaaatgta tttatttgag tgtctttccc
5641 cccctcaccc tcaccatctg aggggctccc tgagatcttg gtagaggagg cccctcctgc
5701 ccagaccttc gtttgtttcc ccggtggccc ttgcttcttg ctttgcagac tgcctgcagc
5761 catgattttg tcactgacat ctgtgagcca aagactgagc ctttttggca ggaataataa
5821 gcaatactac acaacttgct actttcagaa aacttttttt tagcttcacc gatgacaaca
5881 gaggaagaag ggaactggga tttgggtaag ttctcctcca ctgtttgacc aaattctcag
5941 tgataaatat gtgtgcagat ccctagaaga gaaaacgctg actttctttt taagtgtggc
6001 acataaggat ctgcagaatt ttccgtagac aaagaaagga tcttgtgtat ttttgtccat
6061 atccaatgtt atatgaacta attgtattgt tttatactgt gaccacaaat attatgcaat
6121 gcaccatttg ttttttattt cattaaagga agtttaattt aaaaaaaaaa aaaaa
//