LOCUS BC152442 5319 bp mRNA linear HUM 23-NOV-2007
DEFINITION Homo sapiens EFR3 homolog A (S. cerevisiae), mRNA (cDNA clone
MGC:176688 IMAGE:8862567), complete cds.
ACCESSION BC152442
VERSION BC152442.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5319)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5319)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-AUG-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Kazusa DNA Research Inst.
cDNA Library Preparation: Kazusa DNA Research Institute
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCF Plate: 15 Row: f Column: 1.
FEATURES Location/Qualifiers
source 1..5319
/db_xref="H-InvDB:HIT000436033"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:176688 IMAGE:8862567"
/tissue_type="Clones donated by Kazusa DNA Research Inst."
/clone_lib="Kazusa-KIAA-pBluescriptIISK+"
/lab_host="DH5alpha T1-resistant"
/note="Vector: pBluescript II SK+; Clone identification
sequence tag: NA"
gene 1..5319
/gene="EFR3A"
/db_xref="GeneID:23167"
/db_xref="HGNC:HGNC:28970"
CDS 194..2659
/gene="EFR3A"
/codon_start=1
/product="EFR3 homolog A (S. cerevisiae)"
/protein_id="AAI52443.1"
/db_xref="GeneID:23167"
/db_xref="HGNC:HGNC:28970"
/translation="MPTRVCCCCSALRPRYKRLVDNIFPEDPKDGLVKTDMEKLTFYA
VSAPEKLDRIGSYLAERLSRDVVRHRSGYVLIAMEALDQLLMACHSQSIKPFVESFLH
MVAKLLESGEPKLQVLGTNSFVKFANIEEDTPSYHRRYDFFVSRFSAMCHSCHSDPEI
RTEIRIAGIRGIQGVVRKTVNDELRATIWEPQHMDKIVPSLLFNMQKIEEVDSRIGPP
SSPSATDKEENPAVLAENCFRELLGRATFGNMNNAVRPVFAHLDHHKLWDPNEFAVHC
FKIIMYSIQAQYSHHVIQEILGHLDARKKDAPRVRAGIIQVLLEAVAIAAKGSIGPTV
LEVFNTLLKHLRLSVEFEANDLQGGSVGSVNLNTSSKDNDEKIVQNAIIQTIGFFGSN
LPDYQRSEIMMFIMGKVPVFGTSTHTLDISQLGDLGTRRIQIMLLRSLLMVTSGYKAK
TIVTALPGSFLDPLLSPSLMEDYELRQLVLEVMHNLMDRHDNRAKLRGIRIIPDVADL
KIKREKICRQDTSFMKKNGQQLYRHIYLGCKEEDNVQKNYELLYTSLALITIELANEE
VVIDLIRLAIALQDSAIINEDNLPMFHRCGIMALVAAYLNFVSQMIAVPAFCQHVSKV
IEIRTMEAPYFLPEHIFRDKCMLPKSLEKHEKDLYFLTNKIAESLGGSGYSVERLSVP
YVPQVTDEDRLSRRKSIVDTVSIQVDILSNNVPSDDVVSNTEEITFEALKKAIDTSGM
EEQEKEKRRLVIEKFQKAPFEEIAAQCESKANLLHDRLAQILELTIRPPPSPSGTLTI
TSGHAQYQSVPVYEMKFPDLCVY"
BASE COUNT 1580 a 983 c 1053 g 1703 t
ORIGIN
1 ggctggcggc ggtagctgtc gcccgcttgg ttgcgtgacc gcggggtccg cgtccgctcc
61 ctccaccctt cgcccttcgc ccttcgcctc gtcccggcct ccgcggccca gcaacggccg
121 tcatggtgcc gtcggcgctc cctgcgcggc cccgctgagc ctcggtgcgg cggcgagcgc
181 ggtcgagatc gccatgccta cccgagtatg ctgctgctgt tccgctttgc gtcctcgcta
241 caaacgcctg gtggacaaca tattccctga agatccaaaa gatggccttg tgaaaactga
301 tatggagaaa ttgacatttt atgcagtatc tgctccagag aaactggatc gaattggttc
361 ttacctggca gaaaggttga gcagggatgt tgtcagacat cgttctgggt atgttttgat
421 tgctatggag gcactggacc aacttctcat ggcttgccat tctcaaagca ttaagccatt
481 tgtagaaagc tttcttcata tggtggcaaa gctgctggaa tcgggggaac caaagcttca
541 agttcttgga acaaattctt ttgtcaaatt tgcaaatatt gaagaagaca caccatccta
601 tcacagacgt tatgactttt ttgtgtctcg attcagtgcc atgtgccatt cctgtcatag
661 tgatccagaa atacgaacag agatacgaat tgctggaatt agaggtattc aaggtgtggt
721 tcgcaaaaca gtcaacgatg aacttcgggc caccatttgg gaacctcagc atatggataa
781 gattgttcca tccctcctgt ttaacatgca aaagatagaa gaagttgaca gtcgcatagg
841 ccctccttct tctccttctg caactgacaa agaagagaat cctgctgtgc tggctgaaaa
901 ctgtttcaga gaactgctgg gtcgagcaac ttttgggaat atgaataatg ctgttagacc
961 agtttttgcg catttagatc atcacaaact gtgggatccc aatgaatttg cagttcactg
1021 ctttaaaatt ataatgtatt ccattcaggc tcagtattct caccatgtga tccaggagat
1081 tctaggacac cttgatgctc gtaaaaaaga tgctccccgg gttcgagcag gtattattca
1141 ggttctgtta gaggctgttg ccattgctgc taaaggttcc ataggtccga cagtgctgga
1201 agtcttcaat acccttttga aacatctgcg tctcagcgtt gaattcgaag caaatgattt
1261 acagggggga tctgtaggca gtgtcaactt aaatacaagt tccaaagaca atgatgagaa
1321 gattgtgcag aatgctatca tccaaacaat aggatttttt ggaagtaacc taccagatta
1381 tcagaggtca gaaatcatga tgttcattat ggggaaagta cctgtctttg gaacatctac
1441 ccatactttg gatatcagtc aactagggga tttgggaacc aggagaattc agataatgtt
1501 gctgagatct ttgcttatgg tgacctctgg atataaagcg aagacgattg ttactgcact
1561 gccagggtct ttcctggatc ctttgttatc accatctctc atggaggact acgaactgag
1621 acagttggtc ttggaagtaa tgcataatct catggatcgt catgacaata gggcaaagct
1681 tcgagggatc agaataatac cggatgtagc tgacctaaag ataaaaagag aaaaaatttg
1741 cagacaagac acaagtttca tgaaaaagaa tgggcaacag ctgtatcggc acatatattt
1801 gggttgtaaa gaggaagaca acgttcagaa aaactatgaa ctactttata cttctcttgc
1861 tcttataact attgaactgg ctaatgaaga agtagttatt gatctcattc gactggccat
1921 tgctttacag gacagtgcaa ttatcaatga ggataatttg ccaatgttcc atcgttgtgg
1981 aatcatggca ctggttgcag catacctcaa ctttgtaagt cagatgatag ctgtccctgc
2041 attttgccag catgttagca aggttattga aattcgaact atggaagccc cttattttct
2101 accagagcat atcttcagag ataagtgcat gcttccaaaa tctttagaga agcatgaaaa
2161 agatttgtac tttctgacca acaagattgc agagtcgcta ggtggaagtg gatatagtgt
2221 tgagagattg tcagttccgt atgtaccaca agtaacagat gaagatcgac tttctagaag
2281 aaaaagcatt gtggacaccg tatccattca ggtggatatt ttatccaaca atgttccttc
2341 tgatgatgtg gttagtaaca ctgaagaaat cacttttgaa gcattgaaga aagcaattga
2401 taccagtgga atggaagaac aggaaaagga aaagaggcgt cttgtgatag agaaatttca
2461 gaaagcacct tttgaagaaa tagcagcaca gtgtgaatcc aaagcaaatt tgcttcatga
2521 tagacttgcc caaatattgg aactcaccat acgtcctcct cccagtccat caggaacact
2581 gaccattact tctgggcatg cccaatacca atctgtccca gtctatgaga tgaagtttcc
2641 agatctgtgt gtgtactgat cggcgcatga agacctcagc atatgatttg taaagcctaa
2701 aaattaaggc caagctgagc tttcagggtt tacttaatgt gtattaacat acttcttgaa
2761 aataatgatg gaacatatct ttaaccaaat gtttggcata ccatattaga agttttggag
2821 ctatatataa tttcgagtac tttcaaagat agatttatgc catgttaatt tgctttgagg
2881 ttcctgttgc ctttttaagt tgaacatgtt ttggtttcac tttattccac tgttaagtag
2941 tatgttttaa acttttcaca aatgtaatgt tttttaaaaa gtaagccttc agaggattga
3001 aactgtataa attgtttatc tcttaaacat ctacacagcc gcttagatgt agaatttttg
3061 ttgttgtttt ctgcaaaggc agatacattt aaatatattc ctagtcctgg ggctgcaaaa
3121 ctgttcggtg gctttttgtc cccatgcttt agataagctg ggataggcac cttgctattc
3181 agttactata ataatatgtg ataggcattc ctcatcttct tcacaataat aggacatctg
3241 ttgaatagca ttcctcgaat ataaccctaa aaacgccata ctttaaattg tctggttctt
3301 gtaatattgt gtttcctgcc aagagtttga ccattctgct tgagaagtgt agagcttact
3361 cttggagtac caaactgtgc aatattttta catcataaga tgtattagtt tacaggctgt
3421 gctttgaaat tatagtagta ttttgctgtg gctccattaa ttaaatgaga tatatattta
3481 gtgcagaaaa aagacattta aaacagctat tagttcacct gtgaagagtc tgtacatttt
3541 gatttctatt aagagcacat ttatttacat ttgtatatta ttttaaatcc tcatagtcaa
3601 aaaattctcc agatggactt ttaatttgta agatttgaac tgtgacttgt atacatctgt
3661 ttagaatcaa ttatatttga aaagctgcct gtgttttaac agtcaagtgt gctaaagttt
3721 gtcaatttaa gctgcttttg atttcagcta ccaagatcac aggtgcactc tacacataac
3781 actgacagac ccataacatt acatacatct tagtgaattc tatcacatgg taaaatgaac
3841 agctttcttt gtaactcata aaattctctt aggacatttt tataaagtca cctgtttata
3901 gttctatctt ttcagattcc atttcttttt acataaaaca gcatacatat caaaaactgt
3961 agcctagaat acagtttaat ttttggcttt tgtttttgtt taaaaaattg cagtgaagaa
4021 tgggatgttt gtgtttatgg ctatttgggc acctttagta gaaacagaca aaagtaagga
4081 aacgataata ggacaagcat acttgaaaat ttctgaatac ttaaacaaaa gcgcaacatc
4141 ttgaaaacca gtctagtcat tgaaacctat gaaatgacac tgaaagatcc tgggctgctt
4201 cttaaataag tagatcagca agacttgttt cagagtgaca gtggagtcgt taccgctgga
4261 ggactaaagg gccctgtggc agctgtcact ggaactttgc ctcttgatca ggaaaaatgc
4321 ttcaccagtc cgtaaagcca agttgtattt tttttattgc ccttttttcc ttctgtattt
4381 ttaaagaagg atgttaattt ttgactatat attttaaaaa aatctaagca gggggacatg
4441 caaaaacaat catcatccac ttggatgtca ttttatagat taacactgtg tgcttttgta
4501 tggaaaaaat atatataatt taatagtata aaaaataaaa tatatattca tttgcactta
4561 cgtgaaacac aaactttgct ctacaaaatt tcgtgtttct tagtgatttt aaaatgcatg
4621 tattgcatgt aaaggaaaac cattacaatt aatgtttatc acacctttat cttggtcttt
4681 gttgatttgg gttttgttgg ggtttttgtt actgttttta aattacagta ggcttctata
4741 tatcctggat ttctgaactg gtcttgttga caaggattcc caagaaatgg atcttttcac
4801 tggctgactc tcccatatct gcaagagatt ctgcaggaac tgggtgtgca cacggtgttg
4861 tagccagttc aggtactgaa tatttaggat ttggtgaagt tcactgtatt gctatatttt
4921 tgtagataaa taaaactcaa taaattgtta atcattctct ttttgctgta tagaattgct
4981 tatatcactc tttctttcat gacattggtt aacatttaaa tgttcctcct gtacttgtgt
5041 tgtctgtgac cgcttataga gttttattgt tattggtgtt tacctgaata cctatgcgta
5101 cacacacaca tatttcctta atacttctga actcattatc ttttagaata ataatactac
5161 tacactttac cagcaattaa cttctcccta cccaaaatgt ttttcttcct gtctgaaaat
5221 ggaactaatt tgtcttattc gtgcttatat ctgtattaaa tgcaataaag ttagtttttg
5281 aaatgtaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//