LOCUS       BC152405                4258 bp    mRNA    linear   HUM 23-AUG-2007
DEFINITION  Homo sapiens histone deacetylase 9, mRNA (cDNA clone MGC:176629
            IMAGE:8862508), complete cds.
ACCESSION   BC152405
VERSION     BC152405.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 4258)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 4258)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (21-AUG-2007) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Kazusa DNA Research Inst.
            cDNA Library Preparation: Kazusa DNA Research Institute
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Sequencing Group at the Stanford Human Genome
            Center, Stanford University School of Medicine, Stanford, CA  94305
            Web site:       http://www-shgc.stanford.edu
            Contact:  (Dickson, Mark) mcd@paxil.stanford.edu
            Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
            R. M.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRCF Plate: 15 Row: a Column: 2.
FEATURES             Location/Qualifiers
     source          1..4258
                     /db_xref="H-InvDB:HIT000435996"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:176629 IMAGE:8862508"
                     /tissue_type="Clones donated by Kazusa DNA Research Inst."
                     /clone_lib="Kazusa-KIAA-pBluescriptIISK+"
                     /lab_host="DH5alpha T1-resistant"
                     /note="Vector: pBluescript II SK+; Clone identification
                     sequence tag: NA"
     gene            1..4258
                     /gene="HDAC9"
                     /gene_synonym="HD7"
                     /gene_synonym="HDAC"
                     /gene_synonym="HDAC7"
                     /gene_synonym="HDAC7B"
                     /gene_synonym="HDAC9B"
                     /gene_synonym="HDAC9FL"
                     /gene_synonym="HDRP"
                     /gene_synonym="MITR"
                     /db_xref="GeneID:9734"
                     /db_xref="HGNC:HGNC:14065"
                     /db_xref="MIM:606543"
     CDS             151..1923
                     /gene="HDAC9"
                     /gene_synonym="HD7"
                     /gene_synonym="HDAC"
                     /gene_synonym="HDAC7"
                     /gene_synonym="HDAC7B"
                     /gene_synonym="HDAC9B"
                     /gene_synonym="HDAC9FL"
                     /gene_synonym="HDRP"
                     /gene_synonym="MITR"
                     /codon_start=1
                     /product="histone deacetylase 9"
                     /protein_id="AAI52406.1"
                     /db_xref="GeneID:9734"
                     /db_xref="HGNC:HGNC:14065"
                     /db_xref="MIM:606543"
                     /translation="MHSMISSVDVKSEVPVGLEPISPLDLRTDLRMMMPVVDPVVREK
                     QLQQELLLIQQQQQIQKQLLIAEFQKQHENLTRQHQAQLQEHIKELLAIKQQQELLEK
                     EQKLEQQRQEQEVERHRREQQLPPLRGKDRGRERAVASTEVKQKLQEFLLSKSATKDT
                     PTNGKNHSVSRHPKLWYTAAHHTSLDQSSPPLSGTSPSYKYTLPGAQDAKDDFPLRKT
                     ASEPNLKVRSRLKQKVAERRSSPLLRRKDGNVVTSFKKRMFEVTESSVSSSSPGSGPS
                     SPNNGPTGSVTENETSVLPPTPHAEQMVSQQRILIHEDSMNLLSLYTSPSLPNITLGL
                     PAVPSQLNASNSLKEKQKCETQTLRQGVPLPGQYGGSIPASSSHPHVTLEGKPPNSSH
                     QALLQHLLLKEQMRQQKLLVAGGVPLHPQSPLATKERISPGIRGTHKLPRHRPLNRTQ
                     SAPLPQSTLAQLVIQQQHQQFLEKQKQYQQQIHMNKLLSKSIEQLKQPGSHLEEAEEE
                     LQGDQAMQEDRAPSSGNSTRSDSSACVDDTLGQVGAVKVKEEPVDSDEDAQIQEMESG
                     EQAAFMQQVIGKDLAPGFVIKVII"
BASE COUNT         1360 a          816 c          850 g         1232 t
ORIGIN      
        1 ggggaagaga ggcacagaca cagataggag aagggcaccg gctggagcca cttgcaggac
       61 tgagggtttt tgcaacaaaa ccctagcagc ctgaagaact ctaagccaga tggggtggct
      121 ggacgagagc agctcttggc tcagcaaaga atgcacagta tgatcagctc agtggatgtg
      181 aagtcagaag ttcctgtggg cctggagccc atctcacctt tagacctaag gacagacctc
      241 aggatgatga tgcccgtggt ggaccctgtt gtccgtgaga agcaattgca gcaggaatta
      301 cttcttatcc agcagcagca acaaatccag aagcagcttc tgatagcaga gtttcagaaa
      361 cagcatgaga acttgacacg gcagcaccag gctcagcttc aggagcatat caaggaactt
      421 ctagccataa aacagcaaca agaactccta gaaaaggagc agaaactgga gcagcagagg
      481 caagaacagg aagtagagag gcatcgcaga gaacagcagc ttcctcctct cagaggcaaa
      541 gatagaggac gagaaagggc agtggcaagt acagaagtaa agcagaagct tcaagagttc
      601 ctactgagta aatcagcaac gaaagacact ccaactaatg gaaaaaatca ttccgtgagc
      661 cgccatccca agctctggta cacggctgcc caccacacat cattggatca aagctctcca
      721 ccccttagtg gaacatctcc atcctacaag tacacattac caggagcaca agatgcaaag
      781 gatgatttcc cccttcgaaa aactgcctct gagcccaact tgaaggtgcg gtccaggtta
      841 aaacagaaag tggcagagag gagaagcagc cccttactca ggcggaagga tggaaatgtt
      901 gtcacttcat tcaagaagcg aatgtttgag gtgacagaat cctcagtcag tagcagttct
      961 ccaggctctg gtcccagttc accaaacaat gggccaactg gaagtgttac tgaaaatgag
     1021 acttcggttt tgccccctac ccctcatgcc gagcaaatgg tttcacagca acgcattcta
     1081 attcatgaag attccatgaa cctgctaagt ctttatacct ctccttcttt gcccaacatt
     1141 accttggggc ttcccgcagt gccatcccag ctcaatgctt cgaattcact caaagaaaag
     1201 cagaagtgtg agacgcagac gcttaggcaa ggtgttcctc tgcctgggca gtatggaggc
     1261 agcatcccgg catcttccag ccaccctcat gttactttag agggaaagcc acccaacagc
     1321 agccaccagg ctctcctgca gcatttatta ttgaaagaac aaatgcgaca gcaaaagctt
     1381 cttgtagctg gtggagttcc cttacatcct cagtctccct tggcaacaaa agagagaatt
     1441 tcacctggca ttagaggtac ccacaaattg ccccgtcaca gacccctgaa ccgaacccag
     1501 tctgcacctt tgcctcagag cacgttggct cagctggtca ttcaacagca acaccagcaa
     1561 ttcttggaga agcagaagca ataccagcag cagatccaca tgaacaaact gctttcgaaa
     1621 tctattgaac aactgaagca accaggcagt caccttgagg aagcagagga agagcttcag
     1681 ggggaccagg cgatgcagga agacagagcg ccctctagtg gcaacagcac taggagcgac
     1741 agcagtgctt gtgtggatga cacactggga caagttgggg ctgtgaaggt caaggaggaa
     1801 ccagtggaca gtgatgaaga tgctcagatc caggaaatgg aatctgggga gcaggctgct
     1861 tttatgcaac aggtaatagg caaagattta gctccaggat ttgtaattaa agtcattatc
     1921 tgaacatgaa atgcattgca ggtttggtaa atggatatga tttcctatca gtttatattt
     1981 ctctatgatt tgagttcagt gtttaaggat tctacctaat gcagatatat gtatatatct
     2041 atatagaggt ctttctatat actgatctct atatagatat caatgtttca ttgaaaatcc
     2101 actggtaagg aaatacctgt tatactaaaa ttatgataca taatatctga gcagttaata
     2161 ggctttaaat ttatcccaaa gcctgctaca ccaattactt ctaaagaaaa caaattcact
     2221 gttattttga gtttatgtgt tgagatcagt gactgctgga tagtctccca gtctgatcaa
     2281 tgaagcattc gattagtttt tgattttttg caacatctag aatttaattt tcacatcact
     2341 gtacataatg tatcatacta tagtcttgaa cactgttaaa ggtagtctgc cccttccttc
     2401 ctctctcttt ttttagttaa gtagaaatgt tctggtcacc atgccagtag tcctaggtta
     2461 ttgtgtaggt tgcaattgaa catattagga atacaggtgg ttttaaatat atagatgcaa
     2521 attgcagcac tactttaaat attagattat gtctcacata gcactgctca ttttactttt
     2581 attttgtgta atttgatgac actgtctatc aaaaaagagc aaatgaagca gatgcaaatg
     2641 ttagtgagaa gtaatgtgca gcattatggt ccaatcagat acaatattgt gtctacaatt
     2701 gcaaaaaaca cagtaacagg atgaatatta tctgatatca agtcaaaatc agtttgaaaa
     2761 gaaggtgtat catattttat attgtcacta gaatctctta agtataattc cataatgaca
     2821 tgggcatata ccgtaacatt ctggcaaata acaattagaa aagataggtt taacaaaaaa
     2881 atttacttgt atataatgca ccttcaggag gactatgtcc tttgatgcta taaaatacaa
     2941 acaactttga aggcaacaga agacactgtt tattcaagtc agttctttgt caggttcctg
     3001 ctgttctcct acagaaaagt gattctgtga gggtgaacag gaaatgcctt gtggaaacag
     3061 gaagtccaag tgattcatgt actgaggaat gtaggaaaaa aaatctgagg atagtgcttt
     3121 actctttctg tttttaaagg gcactctatg aattgattta ttgtctaaga aaataacacc
     3181 acaagtaggg aaattgttac ggaagctttt cactggaaca tttccttcat attccctttt
     3241 gatatgttta ccttgtttta taggtttact tttgttaagc tagttaaagg ttcgttgtat
     3301 taagacccct ttaatatgga taatccaaat tgacctagaa tctttgtgag gttttttcta
     3361 ttaaaatatt tatatttcta aatccgaggt atttcaaggt gtagtatcct atttcaaagg
     3421 agatatagca gttttgccaa atgtagacat tgttcaactg tatgttattg gcacgtgttg
     3481 tttacatttt gctgtgacat ttaaaaatat ttctttaaaa atgttactgc taaagataca
     3541 ttatcctttt ttaaaaagtc tccattcaaa ttaaattaac ataactagaa gttagaaagt
     3601 ttaaaagttt tccacataat gaaagtcctt ctgataattt gacaaatagc tataatagga
     3661 acactcccta tcaccaacat attttggtta gtatattcct tcatattaaa atgacttttt
     3721 gtcagttgtt ttgcattaaa aatatggcat gcctaagata aaattgtata ttttttccat
     3781 ctcataaata ttcattttct tcaaagtctt ttttcaatct cataaaaaag ggatagtgca
     3841 tcttttaaaa tacattttat ttggggagga acatgtggct gagcagactt ttgtataata
     3901 ttacttcaaa gatatgtaat cacaaacaaa aaaaactatt ttttataatg tcatttgaga
     3961 gagtttcatc agtacagttg gtggacgtta attgtttgaa tttgatagtc tttgaattta
     4021 atcaagaaac tacctggaac cagtgaaaag gaaagctgga cttaaataat cttagaatta
     4081 attgataaat gtctctttta aaatctactg tatttattat aatttacacc cttgaaggtg
     4141 atctcttgtt ttgtgttgta aatatattgt ttgtatgttt cccttcttgc cttctgttat
     4201 aagtctcttc ctttctcaaa taaagttttt tttaaaagaa aaaaaaaaaa aaaaaaaa
//