LOCUS BC151245 6873 bp mRNA linear HUM 12-NOV-2007
DEFINITION Homo sapiens cut-like homeobox 2, mRNA (cDNA clone MGC:167840
IMAGE:8860519), complete cds.
ACCESSION BC151245
VERSION BC151245.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6873)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 6873)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (23-JUL-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Kazusa DNA Research Inst.
cDNA Library Preparation: Kazusa DNA Research Institute
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCF Plate: 14 Row: c Column: 5.
FEATURES Location/Qualifiers
source 1..6873
/db_xref="H-InvDB:HIT000435953"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:167840 IMAGE:8860519"
/tissue_type="Clones donated by Kazusa DNA Research Inst."
/clone_lib="Kazusa-KIAA-pBluescriptIISK+"
/lab_host="DH5alpha T1-resistant"
/note="Vector: pBluescript II SK+"
gene 1..6873
/gene="CUX2"
/gene_synonym="CDP2"
/db_xref="GeneID:23316"
/db_xref="HGNC:HGNC:19347"
/db_xref="MIM:610648"
CDS 165..4625
/gene="CUX2"
/gene_synonym="CDP2"
/codon_start=1
/product="cut-like homeobox 2"
/protein_id="AAI51246.1"
/db_xref="GeneID:23316"
/db_xref="HGNC:HGNC:19347"
/db_xref="MIM:610648"
/translation="MAANVGSMFQYWKRFDLRRLQKELNSVASELSARQEESEHSHKH
LIELRREFKKNVPEEIREMVAPVLKSFQAEVVALSKRSQEAEAAFLSVYKQLIEAPDP
VPVFEAARSLDDRLQPPSFDPSGQPRRDLHTSWKRNPELLSPKEQREGTSPAGPTLTE
GSRLPGIPGKALLTETLLQRNEAEKQKGLQEVQITLAARLGEAEEKIKVLHSALKATQ
AELLELRRKYDEEAASKADEVGLIMTNLEKANQRAEAAQREVESLREQLASVNSSIRL
ACCSPQGPSGDKVNFTLCSGPRLEAALASKDREILRLLKDVQHLQSSLQELEEASANQ
IADLERQLTAKSEAIEKLEEKLQAQSDYEEIKTELSILKAMKLASSTCSLPQGMAKPE
DSLLIAKEAFFPTQKFLLEKPSLLASPEEDPSEDDSIKDSLGTEQSYPSPQQLPPPPG
PEDPLSPSPGQPLLGPSLGPDGTRTFSLSPFPSLASGERLMMPPAAFKGEAGGLLVFP
PAFYGAKPPTAPATPAPGPEPLGGPEPADGGGGGAAGPGAEEEQLDTAEIAFQVKEQL
LKHNIGQRVFGHYVLGLSQGSVSEILARPKPWRKLTVKGKEPFIKMKQFLSDEQNVLA
LRTIQVRQRGSITPRIRTPETGSDDAIKSILEQAKKEIESQKGGEPKTSVAPLSIANG
TTPASTSEDAIKSILEQARREMQAQQQALLEMEVAPRGRSVPPSPPERPSLATASQNG
APALVKQEEGSGGPAQAPLPVLSPAAFVQSIIRKVKSEIGDAGYFDHHWASDRGLLSR
PYASVSPSLSSSSSSGYSGQPNGRAWPRGDEAPVPPEDEAAAGAEDEPPRTGELKAEG
ATAEAGARLPYYPAYVPRTLKPTVPPLTPEQYELYMYREVDTLELTRQVKEKLAKNGI
CQRIFGEKVLGLSQGSVSDMLSRPKPWSKLTQKGREPFIRMQLWLSDQLGQAVGQQPG
ASQASPTEPRSSPSPPPSPTEPEKSSQEPLSLSLESSKENQQPEGRSSSSLSGKMYSG
SQAPGGIQEIVAMSPELDTYSITKRVKEVLTDNNLGQRLFGESILGLTQGSVSDLLSR
PKPWHKLSLKGREPFVRMQLWLNDPHNVEKLRDMKKLEKKAYLKRRYGLISTGSDSES
PATRSECPSPCLQPQDLSLLQIKKPRVVLAPEEKEALRKAYQLEPYPSQQTIELLSFQ
LNLKTNTVINWFHNYRSRMRREMLVEGTQDEPDLDPSGGPGILPPGHSHPDPTPQSPD
SETEDQKPTVKELELQEGPEENSTPLTTQDKAQVRIKQEQMEEDAEEEAGSQPQDSGE
LDKGQGPPKEEHPDPPGNDGLPKVAPGPLLPGGSTPDCPSLHPQQESEAGERLHPDPL
SFKSASESSRCSLEVSLNSPSAASSPGLMMSVSPVPSSSAPISPSPPGAPPAKVPSAS
PTADMAGALHPSAKVNPNLQRRHEKMANLNNIIYRLERAANREEALEWEF"
BASE COUNT 1676 a 2041 c 1890 g 1266 t
ORIGIN
1 ccacgcgtcc ggccggaggg cgcccgaggg gccccgggcc gcggcgctca gggcccgggc
61 ggccggcggc ggccccgggg ctggggggag tccagcccgg atattgagtg cagccattga
121 gaaaagccaa actcttgtgt gtgcgcgtct cgatagcccc caagatggcc gccaatgtgg
181 gatcgatgtt tcaatattgg aagcgatttg atctacggcg actccagaag gagcttaatt
241 ccgtcgcttc tgagctgtct gcacggcagg aggagagtga acattctcat aaacatttaa
301 ttgaactccg ccgggaattt aagaaaaatg tacctgagga aatcagagag atggtggctc
361 ctgtattaaa aagcttccaa gccgaggtgg tggcccttag taagagaagt caggaggcgg
421 aggctgcttt tctgagtgtt tacaagcaat taattgaagc accagacccc gtgcctgtgt
481 ttgaggcggc acgcagccta gacgacagac tgcagccccc cagctttgac cccagtgggc
541 agccccggcg agacctccac acttcgtgga agaggaaccc cgagctcctc agccccaaag
601 agcagagaga ggggacgtcg cctgccgggc ccacgctgac cgagggaagc cgcctcccag
661 gcattcccgg gaaagccctc ctgacagaaa ccttgctgca gagaaatgag gcggaaaaac
721 aaaagggcct tcaagaagta cagatcactt tggcggccag actgggggag gcagaggaga
781 aaatcaaagt cctacattca gcgctaaagg ctacgcaggc agagctgcta gagctgcggc
841 ggaagtacga cgaggaggca gcatccaagg cagatgaagt cggcctgatc atgaccaacc
901 tggagaaagc taatcagcga gctgaggctg cccagcggga ggtggaaagt ctccgggaac
961 agctggcctc tgtcaacagc tccatccgcc tggcttgctg ctctccccag gggcccagtg
1021 gggataaggt gaacttcact ctgtgctcgg gccctcggct ggaggccgcg ctggcctcca
1081 aggacaggga gatcctgcgg ctgctgaagg acgtgcagca cctccagagc tcactgcagg
1141 agctggagga ggcatccgcc aaccagatcg ccgacctgga gcggcagctc acggccaagt
1201 ccgaggccat agaaaagctg gaagagaagc tccaggccca gtctgactat gaggaaatta
1261 aaacggagct gagcatcctg aaagccatga agctggcctc cagcacctgc agcctccccc
1321 agggcatggc caagcctgaa gactcactgc ttattgcaaa ggaggccttc ttccccacgc
1381 agaaattcct tctggagaag cccagcctcc tggccagccc tgaggaagac ccatcagagg
1441 acgattccat caaggattca ctgggcacgg agcagtccta cccctcccct cagcagctcc
1501 cacctccacc agggccagaa gaccccctgt ctcccagccc cgggcagccc ctgctgggcc
1561 ccagcttggg gcctgacggc actcggactt tctcgctgtc ccccttcccc agcctggcat
1621 caggggagag actgatgatg cccccagccg ccttcaaggg agaggcgggc ggcctgctgg
1681 tgttcccccc agccttctat ggcgccaagc cccccacagc ccctgccacc ccggcccctg
1741 gccctgagcc actgggcggt cctgagcccg cggatggtgg tgggggcgga gcggcggggc
1801 ccggggcaga ggaggagcag ctggacacgg cagagatcgc cttccaggtg aaggagcagc
1861 tgctgaaaca caacatcggg cagcgggtgt ttgggcatta cgtgctgggg ctgtcgcagg
1921 gctcggtcag cgagatccta gcccggccca agccctggcg caagctcacg gtgaagggca
1981 aggagccctt catcaagatg aagcagttcc tgtcggatga gcagaatgta ctggcgctca
2041 ggaccatcca agtgcggcag cgaggcagca tcaccccgag aatccgcacg cctgagacag
2101 gctcagacga cgccatcaag agcattctag agcaggccaa gaaggagatc gagtcgcaga
2161 agggcggcga gcccaagacc tcggtggccc cgctgagcat cgccaacggc acgacccccg
2221 ccagcacctc ggaggacgcc atcaagagca tcctggagca ggcacgccgt gagatgcagg
2281 cgcaacagca ggcgctgctg gagatggagg tggcgcccag gggccgctcg gtgcccccct
2341 cgcccccgga gcggccatca ctggccaccg cgagccagaa cggggccccg gccttggtga
2401 agcaggagga gggcagcggg ggccccgcgc aggcgccgct cccggtcctg tcccccgccg
2461 ccttcgtgca gagcatcatc cgcaaggtca agtccgagat cggcgacgcc ggctacttcg
2521 accaccactg ggcctccgac cgcggcctgc tcagccgccc ctacgcctcc gtgtcgccct
2581 cgctgtcctc ctcctcctcc tctggctact ctggccagcc caacggccgc gcctggcccc
2641 gcggggacga ggcccctgtg ccccccgagg acgaggcggc ggcaggggcg gaggacgaac
2701 cccccaggac gggcgagctc aaggctgagg gcgcgacggc cgaggcgggc gcgcggctgc
2761 cctactaccc ggcctacgtg ccgcgcaccc tgaagcccac cgtgccgccg ctgacccccg
2821 agcagtacga gctgtacatg taccgtgagg tagacacgct ggagctcacc cgccaggtca
2881 aggagaagct ggccaagaac ggcatctgcc agaggatctt cggggagaag gtgctgggcc
2941 tgtcacaggg cagcgtgagc gacatgctgt cccggccgaa gccatggagc aagctgacgc
3001 agaaggggcg ggagcccttc atccgcatgc agctgtggct ctctgaccag ctcggccagg
3061 cagtgggcca gcagcctggt gcctcccagg ccagtcccac agaaccaagg tcctcaccat
3121 ccccaccccc cagccccaca gagcctgaga agagctccca ggagccgttg agcctgtccc
3181 tggagagcag caaggagaac cagcagccag agggccgctc cagctcctcg ttgagcggga
3241 agatgtactc aggcagccag gccccagggg gcatccagga gatcgtggcc atgtcccccg
3301 agctggacac gtactccatc accaagaggg tgaaggaggt cctcacagac aacaatctag
3361 ggcagcggct gtttggggaa agcatcctgg gtctgacaca gggctccgtg tctgacctgc
3421 tgtcccggcc caaaccctgg cacaagctga gcctgaaggg gcgggagcct tttgtccgca
3481 tgcagctgtg gctcaatgac ccccataacg tggagaagct gagggatatg aagaagctgg
3541 agaagaaagc ctacctgaaa cgtcgctatg gcctcatcag caccggctca gacagtgagt
3601 ccccggccac ccgctcagag tgccccagcc cctgcctgca gccccaggac ctgagcctcc
3661 tgcagatcaa gaagccccgg gtggtgctgg cacccgagga gaaggaggca ctgcggaagg
3721 cctatcagct ggaaccctac ccctcgcagc agaccatcga gctcctctcc ttccagctca
3781 acctcaagac caacaccgtc atcaactggt tccacaacta caggtcccgg atgcgccggg
3841 agatgttggt ggaggggacc caggatgagc cagaccttga tccaagcggg ggtcctggaa
3901 tcctaccgcc aggccactcc cacccagacc ccaccccgca gagccctgac tctgagactg
3961 aggaccagaa gccaaccgtg aaggaactgg agcttcagga gggccctgag gagaacagca
4021 cacccctgac cacccaggac aaggcccaag tgaggatcaa gcaggaacag atggaggagg
4081 atgctgagga agaggcaggc agccagcccc aggactcagg ggagctggac aaaggccaag
4141 gtccccccaa agaggagcat cccgaccctc cgggtaatga tggactccca aaagtggctc
4201 ccgggcccct ccttccaggt ggatccaccc cagactgtcc ctcacttcat ccccaacagg
4261 agagtgaggc cggggagcga cttcacccgg accctttaag ttttaagtca gcctcagagt
4321 cctcacgctg cagcctggag gtgtcactga actcgccctc ggccgcctcc tcaccaggcc
4381 tcatgatgtc tgtgtcacct gtcccctcct cctcagctcc catctcccca tccccacctg
4441 gcgccccccc tgccaaagtg ccgagtgcca gccccactgc tgacatggct ggagccttgc
4501 accccagtgc caaggtgaac cccaacttgc agcggcggca tgagaagatg gccaatctga
4561 acaacatcat ttaccgacta gagcgggctg ccaatcggga ggaggccctg gagtgggagt
4621 tctgaaggca gggtgagggg gcaagggaca taccctggta actaccttcc ttctcgcact
4681 tactctcctc aacaggatgg ggtaagggag ggaggaactc aaccatcaaa atgtggacag
4741 caatgttatg ccgtttacgt tttttgttgt aatcctagtt ctatgaagct gtgtgagcag
4801 gtgggtcaaa tgccattgcc tccacttttc tgcacccccc tgctcctctt caccctgacc
4861 cctctgcagg aggcagaagc aaaatggcac cacatattca cctgaaaact ccaaactctt
4921 ttagaaaaat aaataaatat ttatagacct cttttagata ttttaataaa ggatcctttg
4981 gaatttatcc cagctgatgc tgttttgata ttacagagag ttataaaatc aggatgctgt
5041 cacaactgtt gcgaagtata cactgaagtt gtgtcgtttt tgccactaga tgagattaaa
5101 agaagacaat tattcaaagc catcacaaaa cactataaga ctgaccaaaa tttagataac
5161 ctttgaacca cgattttttt ccacatctgt ctgtgagaca cagcgcaatg ctactgccct
5221 tccagaaact gtgctaaaaa gagaaagtcc aaaagactct aaacaaaaac ctcgacgccg
5281 ttgaggatgt gtttcattct ggtggtctgt tttgcaagct tgataacaga atgtccgtgc
5341 cattgtaaat gttgtagaga tgtgggccgt ggcccaaccg tcctatatga gatgtagcat
5401 ggtacagaac aaactgctta cacaggtctc actagttaga aacctgtggg ccatggaggt
5461 cagacatcca tcttgtccat ctataggcaa gaagtgtttc cagatccttt ggaaaggtgg
5521 gcatggggca ggtgcttgga gagtggcgtt tgagccagag cgaccccatt tcccgtgtga
5581 accataggca caacccagga agtttcccca cttgtaggag tgtgggtatt ccagagcaag
5641 actgtggcca ccatcttccc ctcttggtgt tttccgaaag tgacagtgtt ggtcatccca
5701 tgaccactga agcttagtaa ccagcgccaa aaagtagatt catcaaacta gagaccccag
5761 ctccccttct cgccatcttc tttctcaagt tgaccgtggt gctgtttctg gaaggcatct
5821 gcaactccaa gtccatgcag aactctggaa ggccaagttc atcgcagcat gttcaccata
5881 tcccagcctc caaatctatc ctcctacctt ccaacgcatg acctgttggg gagcagagac
5941 ttaaccccca actcagagga acccttcctc cagcgtcttt ggcatggttt ctagggtgag
6001 agttcccaat ttggatagaa cggccaccat attggttact gaatctctct cccttgtttt
6061 tattacgttt cctttttcaa actgtccatg ggaaggctga attgagtgac tccccagaat
6121 gaagatgaga aggtgaatat aatcaatgcc aatgtaatgc cagcgggtga gatggccgat
6181 ggaggtttca aagatgtagc tagcattttg aaaccatatg ggcaaaaccc ggcaaccaga
6241 aggggacaga taaggaccgt tccagaaatc ccaactctca cacccagccc aggctgcagt
6301 ctccacacca aacagtcaac aaaacacaaa ccctgaagga aaaccttttc catacaccca
6361 ggctatgcat tgaagagttt tccactgtat acatttttat ccagatgaag gtatttttat
6421 attttgacaa taggaaacag tgaccatttt cagagtaatc aaatctggaa caaatgaaac
6481 atcttttagc caccaccacc ctgttgcaat taagacaacc gtgggggaac acaccacttt
6541 ttactgttga aaccaacaca acgttgaaat ccaggcttat acgcagactc cgattcctag
6601 agaactaaat ttggctttag tgtgacggga tttgattaag cacttagtat agtcttttga
6661 acacggaaat cctgttgtac ttaaagctag cggacccgtg aacaactttg tcaggttcac
6721 gtcctataac ggttaaaaaa cacacacaca catacacaaa ccgtttctat gagagattga
6781 tgaactttgt ttaaaatttt aaaaaaagga acacgttctg taaacgagtc gctaaataca
6841 gaattgtata ataaaaaaaa aaaaaaaaaa aaa
//