LOCUS BC150653 4454 bp mRNA linear HUM 11-FEB-2009
DEFINITION Homo sapiens von Willebrand factor A domain containing 3B, mRNA
(cDNA clone MGC:183564 IMAGE:9057024), complete cds.
ACCESSION BC150653
VERSION BC150653.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4454)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4454)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 13 Row: L Column: 1
single stranded.
FEATURES Location/Qualifiers
source 1..4454
/db_xref="H-InvDB:HIT000503347"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:183564 IMAGE:9057024"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_289"
/note="Vector: pCR-XL-TOPO with reversed insert; Clone
identification sequence tag: TTATGGTT"
gene 1..4454
/gene="VWA3B"
/db_xref="GeneID:200403"
/db_xref="HGNC:HGNC:28385"
CDS 205..4089
/gene="VWA3B"
/codon_start=1
/product="von Willebrand factor A domain containing 3B"
/protein_id="AAI50654.1"
/db_xref="GeneID:200403"
/db_xref="HGNC:HGNC:28385"
/translation="MEKSGPSSTISEQQLQRQEGWINTKTDLAEQSLISSEKWLQLHG
LKSNKLTLKQILSQIGFPHCEDYVASLGRPVASRYADGLFPQLYRAEDGRVYNLTAKS
ELIYQFVEHLTQAVESYKQRMDWLTSKSRQIFGVILEQCVTIVLDFGGILEGELDLCR
EALTMVLQEQVAHITEFNIIRVSQEPVKWQENATPVTEQSIATAISWVEKLTVELTVS
EAGRLDALLEAGRDKTIESIYYFVVGDVPEESKELLLQRALEIPCPVYTVSFNARGEG
TIAFLKDLSAKTHSRFHAFAERTECVEFPAFSTKDGDNVMTWNSRKLKGKLPPGAGVR
EDVFLVWQEMEEACSTLAQIQRLVAEPPKPDVATVDCESETTSVEIASNPEDTWDSKT
WLQKYGLKAQKLSLYDVLADCSFRHADGVVDIKAKPENESVQTSAETNKKTVHAKYCS
RFVHAPWKDGSLVHVNITKEKCKWYSERIHTALARIRRRIKWLQDGSQSLFGRLHNDC
IYILIDTSHSMKSKLDLVKDKIIQFIQEQLKYKSKFNFVKFDGQAVAWREQLAEVNED
NLEQAQSWIRDIKIGSSTNTLSALKTAFADKETQAIYLLTDGRPDQPPETVIDQVKRF
QEIPIYTISFNYNDEIANRFLKEVAALTGGEFHFYNFGCKDPTPPEAVQNEDLTLLVK
EMEQGHSDLEKMQDLYSESLIMDWWYNAEKDGDSKHQKEICSMISTPEKCAKPQSDVD
STQTSSLNMLKGPWGLSDQKVQKKKVLHAESTKTSLLRSQMSSLRSSACSERKDGLSN
ASSRRTALSDKEMSILLAEEWLDDKSSEKVTREGSQVYDHDSSDVSSENWLKTYGLVA
KKLTLMDALSVAAVPHSSTYVPVLDKHVVSKVFDEVFPLAHVCNDTNKMTLINPQGAK
LNIYKRKVEQAIQSYEKRLNKIVWRALSQEEKEKLDANKPIQYLENKTVLNQALERLN
WPISLKELSMLESEILAGKMYIQQAMELQEAAKKNYANKAPGEQQKLQGNPTKKTKSK
RPDPLKGQKVIARCDENGFYFPGVVKKCVSRTQALVGFSYGDTKVVSTSFITPVGGAM
PCPLLQVGDYVFAKIVIPKGFDFYVPAIVIALPNKHVATEKFYTVLKCNNRREFCPRS
ALIKISQNKYALSCSHIKSPPIPEDPEVEDVEARNSAFLFWPLKEADTQDSREPRREK
PRRKKRPAKQPLQQAAPSDSDGSSHGISSHGSCQGTHPEPKTAHLHFPAAGRLGLSSH
AIIATPPPRAALPCTLQATHSSKGLRSVPETL"
BASE COUNT 1232 a 1097 c 1124 g 1001 t
ORIGIN
1 aacagctgga atccttcgcc cccggcgcgc agccttcgcc cgccggaatc gctgccttat
61 ccaccagcgg gatgcttacc tcgcccgccc tctcgggtca ggcgggcccg ggaggatggg
121 agggtggctg ctgagcggga gccgccacgt cttccacccg acatattgcc tagagtttgc
181 tgtgacttag atcttgattc agagatggag aaatcaggcc catcttctac catctctgag
241 cagcagctgc agaggcaaga gggatggatt aacaccaaaa cagacttggc tgagcagagt
301 ctcatttcat ctgagaaatg gcttcaactg catgggctta agagcaacaa attgaccttg
361 aaacagattt tgtcacagat cggattccca cattgtgaag attatgtggc gtctctgggg
421 agacctgtgg cttctcggta tgctgatggt ctgtttccac agctctacag agcagaagat
481 ggcagagtat acaatctgac agctaaatca gaactgattt atcagtttgt ggaacattta
541 acacaagctg tggagagcta caagcagcga atggactggc tcaccagcaa gagccggcag
601 atttttggtg tcatcttgga acagtgcgtc accatagtgc tggattttgg cggcattctg
661 gagggggagc ttgatctgtg ccgagaggct ctaacaatgg ttctccagga gcaggtggct
721 cacataaccg agttcaatat catacgggtt tctcaagagc ctgtgaagtg gcaggaaaat
781 gctactcctg tgaccgaaca gtccatagct actgccatca gttgggttga gaaactgacg
841 gttgagctga ctgtgagcga ggctggccgc ctggatgctc tgctggaagc cgggagagac
901 aagactattg aatccattta ctactttgtg gtgggggatg ttcctgaaga atccaaggag
961 cttctcctcc agagggcctt ggagatcccg tgtccagtct acacagtgtc cttcaacgcc
1021 agaggagaag gcactatagc ttttctaaag gatctgagtg ccaagaccca cagcagattc
1081 cacgcatttg ccgagagaac agagtgtgta gaatttcctg cattctccac aaaggatggt
1141 gacaatgtga tgacttggaa ttcaaggaaa ctgaaaggaa aactccctcc aggagctgga
1201 gtcagagagg acgtgtttct cgtttggcaa gagatggagg aagcctgcag cacgctggcc
1261 cagatccaga ggctggtggc cgagcctccc aagcccgacg tggccactgt ggactgcgag
1321 tcagaaacaa cctctgttga gattgcatcg aatccagaag acacctggga ctctaagaca
1381 tggctgcaga aatatggctt gaaggcccag aagctatcct tgtatgatgt gcttgccgac
1441 tgctctttcc gccacgctga tggggttgtg gatataaaag ccaaaccgga gaatgagtcc
1501 gtgcagacca gtgcggagac gaacaagaag acagtccatg caaaatattg cagcaggttt
1561 gtccatgctc cctggaagga tgggagcttg gtccacgtca acattaccaa agagaagtgc
1621 aagtggtaca gtgagagaat ccacacagcc ctggcccgga tccgaaggag gattaaatgg
1681 ctacaggatg ggagtcaaag cctctttgga agattgcata atgattgcat ctacattctc
1741 attgacacgt ctcactcaat gaagagcaaa ctggacttgg tgaaggacaa gatcattcag
1801 ttcatacagg aacagctgaa atataaaagt aagtttaact ttgtgaagtt tgatggtcaa
1861 gcagttgctt ggcgggaaca acttgctgaa gtcaatgaag ataatttgga acaggctcag
1921 tcctggatta gagacataaa gattggaagc tccacaaaca ccctgagtgc cctgaaaact
1981 gcttttgctg ataaagaaac acaggcaatc taccttctga ccgatgggag acctgatcag
2041 ccacctgaaa cagttataga ccaggtcaaa cgttttcagg aaattcctat ttataccatc
2101 tccttcaatt acaatgatga gattgcaaac aggtttttga aagaggttgc tgctttgact
2161 ggaggagagt tccattttta taattttggt tgcaaggatc ccactccccc agaggctgtt
2221 cagaatgaag atctgactct tttagttaag gaaatggaac agggtcacag tgatctggag
2281 aagatgcaag acctttattc tgagtccttg atcatggact ggtggtacaa tgcagaaaag
2341 gatggagaca gcaagcatca aaaggaaatc tgttctatga tttcaacccc agaaaagtgt
2401 gcaaagcctc aatctgatgt cgattcaaca caaacttcat ctctgaatat gttgaaggga
2461 ccatggggcc tttcagatca aaaggttcag aaaaagaaag tccttcacgc agaatcaacc
2521 aaaaccagcc tgctcagaag ccagatgtcc tccctcagga gctcagcttg cagtgaaagg
2581 aaggatggcc tctccaatgc cagcagccgg aggactgctc taagtgacaa agaaatgagc
2641 atcttgctgg ctgaggagtg gctggatgac aaatcgtcag aaaaggtgac gcgagaagga
2701 agccaggttt atgaccacga ttcttcagat gtgtcttcag aaaactggct gaagacctat
2761 ggcttggtcg ccaagaaact caccctcatg gatgccttgt cagtggcagc agtcccgcac
2821 agctccacct atgttcccgt cctggacaag catgtcgtgt ctaaggtctt tgatgaggtg
2881 ttccctctgg cacatgtgtg caacgacaca aataagatga cattaattaa cccccaagga
2941 gccaaactca atatctacaa gcgaaaagtg gaacaggcaa ttcaatccta tgaaaagcgc
3001 ttgaataaaa ttgtttggcg agcattatct caagaggaaa aagaaaagtt agatgcaaac
3061 aaaccaatac agtacttgga aaacaaaaca gttttaaacc aggctttaga acggttgaat
3121 tggcccattt cactgaaaga gctgtcgatg ctggaaagtg aaatcctagc tgggaaaatg
3181 tacatccagc aggccatgga actccaggag gctgccaaga agaattatgc aaacaaggcc
3241 ccgggagagc aacagaaatt gcaaggaaat ccaacaaaga aaaccaaatc aaaaagacca
3301 gatcccctca aaggacagaa ggttattgca agatgtgatg aaaatggctt ttattttcca
3361 ggggttgtga agaagtgtgt gagccgcacc caagcactgg tgggcttcag ttacggagac
3421 accaaggtcg tgtccacctc cttcatcacg cctgtggggg gcgccatgcc ctgcccgctg
3481 ctccaggttg gagattatgt gtttgccaaa attgtgatac ccaaaggatt tgacttctat
3541 gtccctgcca ttgtcatagc acttcccaat aagcatgtgg ccacagaaaa attctacaca
3601 gttttgaagt gtaacaaccg gagagaattt tgccctcgga gtgcacttat taagatcagc
3661 caaaacaagt atgcgctctc ttgctctcat ataaagtcac ccccaattcc tgaggatcca
3721 gaagtagagg atgtggaggc gaggaactct gctttcctct tctggccact gaaagaagcg
3781 gacacgcagg attccagaga gccaagacga gagaagccca ggaggaaaaa gaggcccgcc
3841 aagcagccac tccagcaggc ggcgccctcg gactcggacg gctcctccca cggcatcagc
3901 tcccatgggt cctgccaggg gacacacccc gagcccaaga cagcccacct ccacttcccc
3961 gcggccgggc gtctaggact cagcagccac gccatcattg ccacacctcc acctcgagca
4021 gccctgccct gtactctcca agccacccac agcagcaaag ggctgaggag cgtccctgag
4081 acactttaag gccgtctggt ggcagctatg tttaagagac cagcgtcctt ccaggctgtt
4141 cagacctcag cgttgacact gaaactggcc cctccgcgga ggtaaggccg ccctccgcgc
4201 cgcctgtgcc tgccctgtct gtagcaaaga ctcctctccc ctccatccct gctgcctccc
4261 ctacccgttt gacgacttgg ttctggcttt ttctgactgt tctttatcct gttttccccc
4321 tgcactcaca aaattgtatt ccatcttctg gtagacgccc cacccccaga agttttaacc
4381 tgaaggatga ctgtcacagg actttcaaat tgtttagcag tcagcatagt caggatccaa
4441 gcccgcaatc ttgt
//