LOCUS BC150642 2567 bp mRNA linear HUM 11-FEB-2009
DEFINITION Homo sapiens chromosome 1 open reading frame 62, mRNA (cDNA clone
MGC:183552 IMAGE:9057012), complete cds.
ACCESSION BC150642
VERSION BC150642.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2567)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2567)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 13 Row: O Column: 14
single stranded.
FEATURES Location/Qualifiers
source 1..2567
/db_xref="H-InvDB:HIT000503336"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:183552 IMAGE:9057012"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_361"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: TGTCCACT"
gene 1..2567
/gene="C1orf62"
/gene_synonym="RP11-475E11.3"
/db_xref="GeneID:254268"
/db_xref="HGNC:HGNC:28398"
CDS 35..2545
/gene="C1orf62"
/gene_synonym="RP11-475E11.3"
/codon_start=1
/product="chromosome 1 open reading frame 62"
/protein_id="AAI50643.1"
/db_xref="GeneID:254268"
/db_xref="HGNC:HGNC:28398"
/translation="MDEADFSEHTTYKQEDLPYDGDLSQIKIGNDYSFTSKKDGLEVL
NQIIFIADDPQEKAMHNETCGNTAVTIPLGKITENAANKKDEKEKQCTAALHIPANEG
DASKSSISDILLHHLSKEPFLRGQGIDCETLPEISNADSFEEEAIIKSIISCYNKNSW
PKEQTPELTDQLNPKRDGENSNKPGSATTTEENTSDLEGPVAAGDSSHQENVNVLTKT
KGPGDKQKSYQGQSPQKQQTEKANSGNTFKYGQGQVHYQLPDFSKIAPKVKIPKNKII
NKPLAIAKQASFSSKSRDKPTLVQDSLETTPESNCVEKQHQEQKGKITEPSQQIQMEP
IVHIHQELLTGIESEASLSKLSPTSQKGTSSSSSYIFQKISQGKQMCQKLKEQTDQLK
TKVQEFSKRIKQDSPYHLQDKKLVLEKLQGHLELLEQNFLATKDKHLTLQQQVHKHES
TIVGDFDPERKVEGEIFKLEMLLEDVKEKMDESKYTSAPSLPVSSPVTLDDLASTFSS
LSNEIPKEHPGHPSGPRGSGGSEVTGTPQGGPQEAPNEELCELAPQTYLNGHYGDAAA
QNKPDQVAMRLSSNSGEDPNGTPRRQDCAEMTAPSPSCAFCRRLLEWKQNVEKKGHGR
INCGRFSIVLHEKAPHSDSTPNSDTGHSFCSDSGTEMQSNKCQDCGTKIPTSRRACRK
EPTKEFHYRYNTPGQNYSNHSKRGAFVQPHSLDESKNSSPSFLKPKRICSQRVNSKSF
KGEHEPTPGKKKLQAFMTYSSDPATPSPHFYSCRISGSKSLCDFDSTEEIKSEILNSA
LDHALRTATILKETTDQMIKTIAEDLAKAQRWRNRLKY"
BASE COUNT 871 a 591 c 535 g 570 t
ORIGIN
1 aggcagagga cgagagcgat cgggctgcac acacatggat gaggctgatt tttcagaaca
61 cacgacttat aagcaggagg atttgcctta tgatggggac ctctctcaga ttaagatagg
121 caatgattac agttttacct caaaaaagga tggccttgaa gtcttaaatc aaattatttt
181 catagcagat gaccctcaag agaaggctat gcataatgag acttgtggaa atacagctgt
241 gaccataccc ctgggtaaaa ttactgaaaa tgctgccaac aaaaaagacg agaaagagaa
301 acaatgcact gcagctcttc atattccagc aaatgaagga gacgcttcta agtcaagcat
361 ttctgatatt ttacttcatc atctttccaa agagccattc ttaagaggtc aaggcattga
421 ttgtgaaacc ctcccagaga tctcaaatgc cgacagtttt gaagaggaag ctattattaa
481 aagtattatt tcatgttata ataagaattc ttggccaaaa gaacaaaccc cagaactcac
541 tgaccaactc aacccgaaaa gggatggtga aaacagcaat aagcctggtt ctgccaccac
601 gacagaggaa aatacctctg atttagaagg gccagtggct gctggagata gcagccatca
661 agaaaatgtg aatgttctaa ctaaaaccaa gggtccaggt gataaacaaa aaagttatca
721 agggcagtca ccccagaaac agcagactga aaaagcaaat tcaggcaaca cgttcaaata
781 cggccaaggt caagttcatt accagctccc tgatttctct aagattgctc ccaaagtgaa
841 aattcctaaa aataagataa ttaataaacc acttgcaata gctaaacaag ccagcttttc
901 ttccaagtcg agagataaac ccactcttgt gcaagatagt ctagaaacca cgcctgagtc
961 aaactgtgtt gaaaaacaac atcaagagca gaaagggaaa atcactgaac cttcacaaca
1021 aatccagatg gagcccatag tacatatcca ccaagaactt ctcacaggaa tagaatctga
1081 ggcaagtctc tctaagttgt caccaacctc tcagaaaggc acttcctcaa gttcttctta
1141 catatttcaa aagatatccc aagggaaaca gatgtgtcag aagttgaaag aacagactga
1201 tcaactgaag actaaagtac aagaattttc caaaagaata aaacaggact ctccttacca
1261 tttgcaagac aagaagctgg tcctggagaa actgcaggga caccttgaac tgctggagca
1321 gaactttctg gccaccaagg acaagcatct gactttgcag cagcaagtcc acaagcacga
1381 atcaacaatc gttggtgact ttgatccaga aagaaaagtg gaaggtgaaa tcttcaaatt
1441 ggagatgctg cttgaagatg ttaaagagaa aatggatgaa agcaaatata cttcagctcc
1501 ttcccttcct gtgagttctc cagttaccct ggatgacttg gcctccacct tctcttcact
1561 ctcaaatgag attcccaagg agcaccccgg ccacccttct gggcctcgag gctcaggtgg
1621 gagtgaggta acagggacac cccaaggagg gccgcaggag gcccccaacg aggagctctg
1681 tgagctggcc ccgcagactt acctaaacgg tcattatgga gatgcagctg cccagaacaa
1741 gccagaccaa gtggccatga ggctgtcttc taactctggg gaggatccca acggcactcc
1801 aagaaggcag gattgtgcag agatgacggc acccagtccg agctgtgcct tctgtcgcag
1861 gctccttgaa tggaagcaaa acgtggagaa aaagggccac ggaaggatca actgtggaag
1921 attttcaatt gtccttcatg aaaaggcacc acactcagat tcaactccca attctgatac
1981 aggacacagc ttctgttctg attctggcac tgaaatgcag agtaacaaat gtcaggactg
2041 tggcactaag attcctacct cccgaagagc ctgcaggaaa gaaccaacta aagaatttca
2101 ttatagatac aacactccag gacagaatta ctcaaatcat agcaaaagag gtgcctttgt
2161 ccagccccat tctttagatg aaagtaaaaa ctcttcaccc tcttttttaa aacccaagcg
2221 gatctgttct cagagagtga attcaaaatc ctttaaaggt gaacatgagc ccacaccagg
2281 aaaaaaaaaa cttcaggctt tcatgaccta cagctcagac cctgcaacac cctcacccca
2341 tttctactcc tgcaggattt ctggaagcaa atccttatgt gactttgata gcactgaaga
2401 aataaaatct gagattttaa actcggcttt ggatcatgcc ctaaggacag caaccatttt
2461 gaaagaaact acagatcaaa tgattaaaac gattgcagaa gaccttgcta aagcacagag
2521 gtggaggaat cgactgaaat actagttcaa cgctaggcta ccaagga
//