LOCUS BC150639 6451 bp mRNA linear HUM 11-FEB-2009
DEFINITION Homo sapiens echinoderm microtubule associated protein like 5, mRNA
(cDNA clone MGC:183549 IMAGE:9057009), complete cds.
ACCESSION BC150639
VERSION BC150639.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6451)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 6451)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 13 Row: I Column: 24
single stranded.
FEATURES Location/Qualifiers
source 1..6451
/db_xref="H-InvDB:HIT000503333"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:183549 IMAGE:9057009"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_313"
/note="Vector: pCR-XL-TOPO with reversed insert; Clone
identification sequence tag: CGACTCGG"
gene 1..6451
/gene="EML5"
/gene_synonym="EMAP-2"
/gene_synonym="HuEMAP-2"
/db_xref="GeneID:161436"
/db_xref="HGNC:HGNC:18197"
CDS 250..6183
/gene="EML5"
/gene_synonym="EMAP-2"
/gene_synonym="HuEMAP-2"
/codon_start=1
/product="EML5 protein"
/protein_id="AAI50640.1"
/db_xref="GeneID:161436"
/db_xref="HGNC:HGNC:18197"
/translation="MAARSAPSCHLRLEWVYGYRGHQCRNNLYYTAAKEIVYFVAGVG
VVYSPREHRQKFYRGHSDDIISLALHPERVLVATGQVGKEPYICIWDSYTVQTISVLK
DVHTHGIACLAFDLDGQRLVSVGLDSKNAVCVWDWKRGKMLSMAPGHTDRIFDISWDL
YQPNKLVSCGVKHIKFWSLCGNALTPKRGVFGKTGDLQTILCLACARDELTYSGALNG
DIYVWKGINLIRTIQGAHAAGIFSMNACEEGFATGGRDGCIRLWDLTFKPITVIDLRE
TDQGYKGLSVRSVCWRGDHILVGTQDSEIFEIVVQERNKPFLIMQGHCEGELWALAVH
PTKPLAVTGSDDRSVRIWSLVDHALIARCNMEEPIRCAAVNADGIHLALGMKDGSFTV
LRVRDMTEVVHIKDRKEAIHELKYSPDGTYLAVGCNDSSVDIYGVAQRYKKVGECLGS
LSFITHLDWSSDSRYLQTNDGNGKRLFYRMPGGKEVTSTEEIKGVHWASWTCVSGLEV
NGIWPKYSDINDINSVDGNYIGQVLVTADDYGIIKLFRYPCLRKGAKFRKYIGHSAHV
TNVRWSHDYQWVISIGGADHSVFQWKFIPERKLKDAVHIAPQESLADSHSDESDSDLS
DVPELDSEIEQETQLTYRRQVYKEDLPQLKEQCKEKQKSATSKRRERAPGNSIRLHFV
HGYRGYDCRSNLFYTQIGEIVYHVAAVGVIYNRQQNTQRFYLGHDDDILCLTIHPLKD
YVATGQVGRDPSIHIWDTETIKPLSILKGHHQYGVSAVDFSADGKRLASVGIDDSHTV
VLWDWKKGEKLSIARGSKDKIFVVKMNPYVPDKLITAGIKHMKFWRKAGGGLIGRKGY
IGTLGKNDTMMCAVYGWTEEMAFSGTSTGDVCIWRDIFLVKTVKAHDGPVFSMHALEK
GFVTGGKDGIVALWDDSFERCLKTYAIKRAALAPGSKGLLLEDNPSIRAISLGHGHIL
VGTKNGEILEVDKSGPITLLVQGHMEGEVWGLATHPYLPICATVSDDKTLRIWDLSPS
HCMLAVRKLKKGGRCCCFSPDGKALAVGLNDGSFLMANADTLEDLVSFHHRKDMISDI
RFSPGSGKYLAVASHDSFIDIYNVMSSKRVGICKGATSYITHIDWDIRGKLLQVNTGA
KEQLFFEAPRGKKQTIPSVEVEKIAWASWTSVLGLCCEGIWPVIGEVTDVTASCLTSD
KMVLATGDDLGFVKLFRYPTKGKFGKFKRYVAHSTHVTNVRWTYDDSMLVTLGGTDMS
LMVWTNEMEGYREKRPCDSEESDIDSEEDGGYDSDVTRENEISYTIRALSTNIRPMLG
IKPHLQQKEPSIDERQGVVRGSRPPVSRAPPQPEKLQTNNVGKKKRPIEDLVLELIFG
YRGRDCRNNVHYLNDGDDIIYHTASVGILHNVATGSQSFYQEHNDDILCLTVNQHPKF
INIVATGQVGDSADMSATAPSIHIWDAMNKQTLSILRCYHSKGVCSVSFSATGKLLLS
VGLDPEHTITIWRWQEGAKIASRAGHNQRIFVAEFRPDSDTQFVSVGVKHVKFWTLAG
RALLSKKGLLSTLEDARMQTMLAIAFGANNLTFTGTISGDVCVWKDHILCRIVARAHN
GPVFAMYTTLRDGLIVTGGKERPSKEGGAVKLWDQELRRCRAFRLETGQATDCVRSVC
RGKGKILVGTRNAEIIEVGEKNAACNILVNGHVDGPIWGLATHPSRDFFLSAAEDGTV
RLWDIADKKMLNKVNLGHAARTVCYSPEGDMVAIGMKNGEFIILLVSSLKIWGKKRDR
RCAIHDIRFSPDSRYLAVGSSENSVDFCDLTLGPTLNGISYCKDIPGFVIRMDFSADS
SYLQVSSGCYKRHVYEVPSGKHLMDHAAIDRITWATWTSILGDEVLGIWSRHAEKADV
NCACVSHSGISLVTGDDFGMVKLFDFPCPEKFAKHRRFLGHSPHVTNVRFTSGDRHVV
SAGGDDCSLFVWRCVHAPH"
BASE COUNT 1871 a 1191 c 1670 g 1719 t
ORIGIN
1 ctgggcatcc acttgacagc cggcggcgct cgcggccctc agcatgttcc gcgaggcgag
61 ggttttcctc ccgcctgtgg gctgaggcgg cggcggcccc cgaaacgaga tgcacctgac
121 gggcgcggct tagaggacgc ggctggcggg aagtcccggc agccagcggg agggctttcg
181 ttgccgggcc gccgccgcct cccgtcgccg ccgcgggcct gagcgggagc ggcgggtggg
241 cgccccgaca tggcggcccg gagcgccccg agctgccacc tgcggctcga gtgggtgtac
301 ggctaccggg gccaccagtg ccgcaacaac ctctactaca ctgcggccaa ggagatcgta
361 tacttcgtgg cgggggtcgg cgtggtgtac agcccgcggg agcacaggca gaagttctac
421 cggggccaca gcgacgacat catcagcctt gcattgcatc ctgaacgagt gttggtagca
481 acaggacaag ttgggaaaga gccttatatt tgtatttggg attcatacac tgtgcagacc
541 atatcagttt taaaggatgt tcatacacat ggtatagctt gcttggcgtt tgacttagat
601 ggacagcgct tggtttcagt tggacttgat tcaaagaatg cagtttgtgt ttgggactgg
661 aaaaggggaa aaatgttgtc tatggctcct ggtcatacag atagaatatt tgatatttct
721 tgggatttgt accagccaaa taaacttgtc agctgtggtg taaaacatat caagttctgg
781 agtttatgtg gaaatgctct gaccccaaaa cgaggtgtct ttggtaagac gggtgacctt
841 cagacaatac tgtgcctagc ctgtgcaagg gatgaattaa catattctgg tgcactcaat
901 ggggatatat atgtttggaa aggaatcaat cttatacgaa caatacaagg agcccatgct
961 gcaggaattt ttagcatgaa tgcttgtgaa gaaggctttg ctactggtgg cagagatggt
1021 tgtattcgtc tttgggattt aacttttaaa ccaattactg tgattgatct cagggaaaca
1081 gaccagggat acaaaggttt gtctgtaagg agtgtgtgtt ggcgaggtga ccacattcta
1141 gttggaacac aggacagtga aatttttgaa attgtggtgc aagaaagaaa taaacctttt
1201 ctaattatgc aagggcattg tgaaggtgaa ctttgggcac ttgctgtcca tcctactaaa
1261 cctttggctg tgactggaag tgatgatcgt tcggtcagga tatggagcct agtagatcat
1321 gcattaatag caaggtgtaa tatggaagaa ccaattcgtt gtgcagctgt caatgcagat
1381 ggaatccatc ttgcccttgg aatgaaggat ggctcattca ctgtacttag agtaagagat
1441 atgacggaag ttgtacatat taaagatagg aaggaggcaa ttcatgagtt aaaatattca
1501 ccagatggaa cttaccttgc tgttggatgc aatgacagct cggttgatat ttatggagtt
1561 gctcagcgtt ataaaaaagt tggcgagtgt ttgggatccc ttagtttcat cactcatctg
1621 gactggtctt cagacagtag atatttgcag acaaatgatg gaaatgggaa aagacttttt
1681 tatagaatgc caggaggaaa ggaagtgaca agtacagaag aaataaaagg tgttcattgg
1741 gcttcatgga catgtgtttc aggccttgaa gtaaatggaa tttggcccaa gtattcagat
1801 atcaacgata taaattcagt agatggaaat tatattggcc aagttttagt tacagctgat
1861 gactatggaa ttataaaatt attccgatat ccatgtttaa gaaaaggggc caagtttaga
1921 aaatatattg gccattcagc tcacgtaact aatgtcagat ggtcacatga ttatcagtgg
1981 gttatttcta ttggtggagc agatcactct gtctttcagt ggaaatttat tcctgaaaga
2041 aaactgaaag atgctgttca catagcaccc caagaaagtc tggctgactc tcatagtgat
2101 gaatcagatt cagatctgtc tgatgttcca gaactggatt ctgaaattga acaagagaca
2161 cagctcacct accgtcgaca ggtttacaaa gaagatctac ctcagcttaa agaacagtgc
2221 aaagagaaac aaaaaagtgc tacttctaaa agaagagagc gggctccagg aaatagtatt
2281 cgattacact ttgttcacgg ttacagaggt tatgactgtc gaagtaatct gttttatact
2341 caaattggtg aaattgtgta ccatgtggca gcagtgggtg tcatttataa tcgacagcaa
2401 aacacacagc gtttttatct gggtcatgat gatgatattc tctgcctaac tattcatcct
2461 ttgaaagact acgtggcaac aggccaggtt ggtagagatc cctcaattca tatatgggat
2521 acagagacca ttaaaccatt gtccatatta aagggccacc accagtatgg tgttagtgcc
2581 gttgatttct cagcggatgg gaaacgtttg gcatcagttg gcatagatga tagccatact
2641 gttgtgctct gggactggaa gaaaggagag aaactttcaa tagcaagagg aagtaaagat
2701 aagatttttg ttgtaaagat gaacccctat gtgcctgata aactaattac agctggaatt
2761 aaacacatga aattttggcg taaagcaggg ggaggattga ttggaagaaa aggctacata
2821 ggcacactgg ggaaaaatga cacaatgatg tgtgcagtgt atggatggac tgaagagatg
2881 gctttttctg gaacatccac aggagatgtg tgtatctgga gagacatctt tcttgtaaaa
2941 acagtgaaag cgcatgatgg gccagtgttc agtatgcatg cattggaaaa agggtttgta
3001 actggaggaa aagatggtat agtagctctt tgggatgact cttttgaaag atgtctcaag
3061 acctatgcta taaaaagagc tgcattggcc ccaggatcta aaggtcttct cttggaagat
3121 aatccatcta tacgtgccat atcattagga catggtcata ttttagttgg cacaaagaat
3181 ggtgaaatac tagaagtgga taaaagtggc ccaataacac ttctggttca gggacacatg
3241 gaaggagagg tgtggggttt agctacacac ccttatctgc ccatctgtgc tactgtaagc
3301 gatgataaaa ccttaagaat atgggatctc tcacctagtc attgtatgtt ggctgtccgg
3361 aagctgaaaa agggtgggag gtgttgctgt ttttctcctg atggtaaagc tttagccgta
3421 ggtctcaacg atggaagctt cttaatggca aatgcggata ctctagagga tcttgtgtct
3481 tttcatcaca gaaaagatat gatttcagat attcgatttt cacctggttc tgggaaatat
3541 cttgctgtag catcccatga cagctttata gatatataca atgtaatgag tagtaaacga
3601 gtaggaatat gcaaaggagc taccagttac ataacccata ttgattggga tattagagga
3661 aagcttttac aggtcaacac tggtgctaag gaacaattat tctttgaagc tcccagaggg
3721 aaaaaacaaa ccatccccag cgtggaggta gaaaaaattg cttgggcatc atggacaagt
3781 gtacttggtt tatgctgtga aggaatttgg ccagtaattg gagaagttac agatgtaact
3841 gcttcttgcc tcaccagtga caaaatggtt ctagctaccg gggacgattt gggatttgtg
3901 aagttattta gatatcctac taaagggaaa tttggaaagt ttaagaggta tgtggcccat
3961 agtacacatg tcacaaatgt tcgctggact tatgatgaca gcatgttggt taccctaggc
4021 ggtacagata tgtctttaat ggtgtggaca aatgagatgg aaggctatcg agaaaaaagg
4081 ccttgtgata gtgaagaatc cgacattgat tctgaagaag atgggggcta tgacagtgat
4141 gttacaaggg agaatgaaat cagttacacc atcagagcct tatcaacaaa tattcgccca
4201 atgttaggaa tcaagcctca tttacaacaa aaagaaccct caattgatga aaggcaggga
4261 gtagtaagag gttccaggcc tccagtgagc agggccccac cacagccaga gaaactccag
4321 acaaacaatg taggcaagaa aaagagacct atagaggacc ttgtgttgga gctcattttt
4381 ggttatcgag gcagagactg taggaataat gttcactatt taaatgatgg tgatgatata
4441 atttatcaca ctgcatctgt tggaattctg cacaatgttg ctacaggttc tcagagtttt
4501 tatcaggaac ataatgatga tattctgtgc ctcacagtaa accagcaccc caaatttatc
4561 aacatagtgg caactggcca agtaggtgat tcagcagaca tgtcagctac agctccttct
4621 attcacatct gggatgcaat gaacaagcag actttatcta tcctaagatg ctaccattca
4681 aagggagtat gttcagtcag cttcagtgct actggcaaac tattgctgtc tgtgggacta
4741 gacccagaac atactattac catttggaga tggcaggaag gtgccaaaat tgccagcaga
4801 gctggtcaca atcaacgtat ttttgtggca gaattccgac cagattcaga tacccagttt
4861 gtctcagtgg gagtaaaaca tgtgaagttc tggaccctgg caggaagagc tcttcttagc
4921 aaaaaagggc tactgagcac actggaagat gcccggatgc agaccatgct cgctattgca
4981 tttggtgcaa ataacttgac gtttacaggt accatcagtg gtgatgtctg tgtgtggaaa
5041 gatcacatat tgtgtagaat cgtggcgaga gctcacaacg ggcctgtgtt tgccatgtac
5101 accaccctgc gagatggact tatcgtgact gggggaaagg aaaggccgtc aaaagaagga
5161 ggagcggtta aactgtggga tcaggaactg aggcggtgcc gtgccttcag gcttgagaca
5221 ggacaagcca cagattgtgt tcgttctgtg tgcagaggca aaggcaagat ccttgttggg
5281 acaaggaatg ctgaaataat cgaagttgga gagaaaaatg cagcttgtaa tattttagtt
5341 aacggtcatg tggatgggcc aatctgggga ctagcaacac atccttccag ggattttttc
5401 ctttctgctg cagaagatgg gacagtgaga ctttgggata ttgctgataa aaagatgtta
5461 aacaaggtga atttgggaca tgctgctcgt actgtgtgtt acagccctga aggggacatg
5521 gtggctattg gaatgaaaaa tggagaattt atcattttac tagtgagttc tctaaaaata
5581 tggggaaaga agagagacag gagatgtgca atccatgata tcagatttag tccggattcc
5641 cggtatctgg cagtaggttc tagtgagaac tcagtggatt tttgtgacct gacgctgggc
5701 cccactctta acggaatcag ctactgcaaa gacattccag gctttgtcat tcgaatggac
5761 ttctctgcag atagcagtta tctccaggtc tctagtggct gctataaacg gcatgtctat
5821 gaagtgcctt caggaaaaca tcttatggat catgccgcta ttgacagaat tacttgggct
5881 acatggacta gtattctagg agatgaggtt ttgggaatct ggtccagaca tgctgagaag
5941 gctgatgtca actgtgcctg tgtatctcat tcaggaatca gtcttgttac aggagatgac
6001 tttggcatgg ttaagttatt tgacttccca tgtccagaaa aatttgcaaa acacagaagg
6061 ttcttgggtc attcgcccca tgtgacaaat gttcgattta ccagtggtga tcgacatgtt
6121 gttagtgctg gaggtgatga ctgcagcttg tttgtctgga ggtgtgtaca tgcacctcac
6181 tgagagatgc tgagatgact acagaaattg actttgagac cagaattaca gagaagaaag
6241 accaagaccc aaccctgcat ggtcaagtgg tgctgaccca ggactgtaac agggagaaat
6301 gcccagaatc atcaaaatgg tgaaagactg atctgttcaa aatatttgct gtatgcactg
6361 ggtatagtcc gtaatccata cactgccaga taatgccatt tcaaggaagg atcgaatact
6421 tgatggtgaa ggccaagtcc ccctgtattg g
//