LOCUS BC150611 4327 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens family with sequence similarity 21, member C, mRNA
(cDNA clone MGC:183521 IMAGE:9056981), complete cds.
ACCESSION BC150611
VERSION BC150611.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4327)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4327)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Ambion
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 684 Row: l Column: 3
single stranded.
FEATURES Location/Qualifiers
source 1..4327
/db_xref="H-InvDB:HIT000503307"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:183521 IMAGE:9056981"
/tissue_type="Testicle, PCR rescued clones"
/clone_lib="NIH_MGC_382"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TGAGAGCT"
gene 1..4327
/gene="FAM21C"
/gene_synonym="FAM21A"
/db_xref="GeneID:253725"
/db_xref="HGNC:HGNC:23414"
CDS 84..3923
/gene="FAM21C"
/gene_synonym="FAM21A"
/codon_start=1
/product="FAM21C protein"
/protein_id="AAI50612.1"
/db_xref="GeneID:253725"
/db_xref="HGNC:HGNC:23414"
/translation="MMNRTTPDQELVPASEPVWERPWSVEEIRRSSQSWSLAADAGLL
QFLQEFSQQTISRTHEIKKQVDGLIRETKATDCRLHNVFNDFLMLSNTQFIENRVYDE
EVEEPVLKAEAEKTEQEKTREQKEVDLIPKVQEAVNYGLQVLDSAFEQLDIKAGNSDS
EEDDANGRVELILEPKDLYIDRPLPYLIGSKLFMEQEDVGLGELSSEEGSVGSDRGSI
VDTEEEKEEEESDEDFAHHSDNEQNRHTTQMSDEEEDDDGCDLFADSEKEEEDIEDIE
ENTRPKRSRPTSFADELAARIKGDAVGRVDEEPTTLPSGEAKPRKTLKEKKERRTPSD
DEEDNLFTPPKLTDEDFSPFGSGGGLFSGGKGLFDDEDEESDLFTEAPQDRQAGASVK
EESSSSKPGKKIPAGAVSVFLGDTDVFGAASVPSMKEPQKPEQPTPRKSPYGPPPTGL
FDDDDGDDDDDFFSAPHSKPSKTGKVQSTADIFGDEEGDLFKEKAVASPEATVSQTDE
NKARAEKKVTLSYSKNLKPSSETKTQKGLFSDEEDSEDLFSSQSASNLKGASLLPGKL
PTSVSLFDDEDEEDNLFGGTAAKKQTLSLQAQREEKAKASELSKKKASALLFSSDEED
QWNIPASQTHLASDSRSKGEPRDSGTLQSQEAKAVKKTSLFEEDKEDDLFAIAKDSQK
KTQRVSLLFEDDVDSGGSLFGSPPTSVPPATKKKETVSEAPPLLFSDEEEKEAQLGVK
SVDKKVESAKESLKFGRTDVAESEKEGLLTRSAQETVKHSDLFSSSSPWDKGTKPRTK
TVLSLFDEEEDKMEDQNIIQAPQKEVGKGCDPDAHPKSTGVFQDEELLFSHKLQKDND
PDVDLFAGTKKTKLLEPSVGSLFGDDEDDDLFSSAKSQPLANLAINPAALLPTAASQI
SEVKPVLPELAFPSSEHRRSHGLESVPVLPGSGEAGVSFDLPAQADTLHSANKSRVKM
RGKRRPQTRAARRLAAQESSEAEDMSVPRGPIAQWADGAISPNGHRPQLRAASGEDST
EEALAAAAAPWEGGPVPGVDTSPFAKSLGHSRGEADLFDSGDIFSTGTGSQSVERTKP
KAKIAENPANPPVGGKAKSPMFPALGEASSDDDLFQSAKPKPAKKTNPFPLLEDEDDL
FTDQKVKKNETKSSSQQDVILTTQDIFEDDIFATEAIKPSQKTREKEKTLESNLFDDN
IDIFADLTVKPKEKSKKKVEAKSIFDDDMDDIFSTGIQAKTTKPKSRSAQAAPEPRFE
HKVSNIFDDPLNAFGGQ"
BASE COUNT 1280 a 962 c 1122 g 963 t
ORIGIN
1 cttggctggg gctaggcttc cggggctctg cagtcctcgg cgtgtgctgg cagcttcgga
61 gcccaccgag ccgggcggct aggatgatga accggacgac ccccgaccag gagctggtgc
121 cggcgtcgga gcccgtgtgg gagcggccgt ggtcggtgga ggagatccgc aggagcagcc
181 agagctggtc gctggcggcc gacgcgggcc tactacagtt tctacaggaa ttctcacagc
241 aaactatctc taggacccat gaaatcaaga aacaagtgga cggactaatt cgggaaacca
301 aagccacaga ttgtcgcctg cataatgtct tcaatgactt ccttatgctc tctaataccc
361 agttcattga gaatcgtgta tatgatgaag aagtggagga gccagtactc aaggctgagg
421 cagaaaaaac agagcaggag aagacacgag agcagaaaga agtagatctc attcctaaag
481 tccaggaggc tgtgaactat ggcttacaag tattggacag tgcctttgag caacttgata
541 tcaaagcagg aaactcagac tccgaggaag atgatgctaa tgggcgggtg gaactgatcc
601 ttgaaccaaa ggatctatac attgatcgtc ctttaccata tctcattggg tcaaagctgt
661 tcatggaaca agaagatgta ggtcttggag agctgtccag tgaagaaggc tctgtaggca
721 gtgatcgtgg cagtattgtg gacactgagg aagagaaaga agaggaggag tcagatgaag
781 attttgccca tcatagtgac aatgaacaaa accggcacac cacacaaatg agtgatgagg
841 aagaggatga tgatggctgt gaccttttcg ctgactctga gaaggaggag gaagatattg
901 aggacattga agaaaatact agacctaaaa gaagcagacc tacatcgttt gcagatgagc
961 tggctgcccg catcaagggg gatgccgtgg gtcgagtgga cgaggagccg acaaccttac
1021 cctcaggaga agcaaaacct cggaagacac tcaaagagaa gaaggaaagg agaactcctt
1081 cagacgatga agaggataac ttattcacac cccccaagct gaccgacgag gacttctcgc
1141 catttggctc tggaggtggc ctgttcagtg ggggcaaggg gctatttgat gatgaggacg
1201 aggagagtga cctcttcacg gaagcccccc aggatcggca agctggagcc tctgttaagg
1261 aggagtcttc atcatccaaa cctggaaaga aaatcccagc aggagctgtt tctgtatttt
1321 taggagacac ggatgtgttt ggtgctgcct ccgttccatc aatgaaggag ccacagaagc
1381 ctgagcagcc cactccaagg aaaagcccct atggtccccc tcccactggc ctctttgatg
1441 atgatgatgg tgatgatgat gacgactttt tctcggcacc ccacagcaaa ccttctaaaa
1501 caggcaaagt ccaatccact gccgatatct ttggtgacga agaaggagat ctgttcaaag
1561 aaaaagccgt agcatcgcca gaagccactg tgagtcagac agatgaaaat aaagcaagag
1621 cagaaaaaaa ggttacctta tcttacagca aaaatctcaa gccctcatca gaaacaaaga
1681 ctcaaaaagg cttattttca gatgaggagg actctgagga tttgttttct tctcaaagtg
1741 cgagtaactt aaaaggtgca tctctgctgc ctggcaagct ccccacgtcg gtttccctgt
1801 ttgatgatga agatgaagag gataatcttt ttgggggtac agctgctaag aagcagacat
1861 tgtctctaca agctcagaga gaagagaaag caaaagcctc cgagctctcc aaaaagaaag
1921 catctgccct gttgttcagc agtgatgagg aggaccagtg gaatattcct gcttcacaga
1981 cccacttagc atctgacagc aggtctaaag gagaacccag ggattctggg accctccaga
2041 gccaggaggc caaggctgtg aaaaagacca gtctctttga ggaagacaaa gaagatgatc
2101 tttttgccat tgccaaggac agccaaaaga agacccagag agtgtcactc ctctttgaag
2161 acgatgttga tagcggaggc tctctgtttg gctctcctcc cacatctgtt cctcctgcaa
2221 caaagaaaaa agagactgtc tctgaggcac cacctttgct gttcagcgat gaagaagaga
2281 aggaggcaca acttggagtg aagtctgtgg ataagaaggt tgagagtgcc aaggagtcat
2341 taaaatttgg gagaactgat gtggctgagt cagaaaagga aggacttttg actagatctg
2401 ctcaggaaac agtcaagcat tctgatttat tttcttcatc atccccatgg gacaaaggaa
2461 ccaagcctag aaccaaaact gttcttagct tgtttgatga ggaagaggat aaaatggaag
2521 atcaaaacat tatccaggct ccacagaaag aagtaggaaa gggctgcgat cctgatgccc
2581 accccaagag cacaggtgtc ttccaggatg aagagctgct tttcagccac aagctccaaa
2641 aggacaatga cccagatgtt gacctttttg ctggcaccaa aaaaaccaag ctgttagagc
2701 caagtgttgg gagcctgttt ggggatgatg aagatgatga tcttttcagc tctgccaagt
2761 cccagccttt ggcaaattta gcgatcaacc cagcggcctt gctgcccaca gcggcttccc
2821 agatctctga agtaaagcct gttttgccag aattggcttt tccttcatct gaacacagaa
2881 ggagccacgg tctggaaagt gtgcctgtcc ttcccgggag tggggaggcc ggtgtgagtt
2941 ttgatcttcc agctcaggca gacaccttac acagtgcaaa caagagccgt gtcaagatga
3001 gagggaagcg tagaccgcag acccgtgcag ctaggcggct ggctgctcag gagtccagcg
3061 aggctgagga catgagcgtc cccagaggac ccattgcaca gtgggctgat ggcgccattt
3121 ccccaaatgg ccatcggcca cagctcagag cagccagtgg agaagacagc actgaggagg
3181 ccctggcagc tgccgctgca ccttgggaag gtggtcctgt gcctggagtg gacacaagcc
3241 cctttgcaaa gtctctgggt cattccagag gggaggctga cctttttgat tctggggaca
3301 ttttttccac gggcactgga tctcagtccg tggagagaac aaaacccaag gcaaagatag
3361 cagagaatcc tgccaaccca ccagtgggtg gtaaagcaaa gagccccatg tttcctgctc
3421 taggcgaggc cagcagtgat gatgatctct ttcagtctgc taaaccaaaa ccagcaaaga
3481 aaacaaatcc ctttcctctc ctggaagatg aggatgacct ctttacagat cagaaagtca
3541 agaagaatga gacaaaatcc agtagtcagc aggatgtcat attaacaaca caagatattt
3601 ttgaggatga tatatttgct acggaagcaa ttaaaccctc tcagaaaacc agagagaagg
3661 agaaaacatt ggaatctaat ttatttgatg ataacattga tatctttgct gacttaactg
3721 taaaaccaaa agaaaagtcc aaaaagaaag tggaagccaa gtctatattt gatgatgata
3781 tggatgacat cttctccact ggtatccagg ctaagacaac caaaccaaaa agccgatctg
3841 cacaggccgc acctgaacca agatttgaac acaaggtgtc caacatcttt gatgatcccc
3901 tgaatgcctt tggaggccag tagagcacac agggtatcca catgttaccc tgcagctaca
3961 ttgttgagtt agtgatgata ttgtatatgc tcatggtctt aactggatta caaaaagcaa
4021 atactagaac agctagctca tcttttaccc aatgtactta gtatttttct gcactggttt
4081 aatcatgctt aatactacaa aacaaaaata aatatttcac agtggttggt ttgttttgtt
4141 tttaaaccac agtttgattt agttagcctt gctggggcca taatatgctt cagggtgtgt
4201 aaaagaagaa atctctttgt ggctttcatg ggcagggaat ctcagagata gcaaatgcca
4261 cctgaccaga agtctttgtt atatggatgg gaaccctaac ttagggcttg ggcaggggaa
4321 agagaaa
//