LOCUS BC150568 1202 bp mRNA linear HUM 17-JUL-2007
DEFINITION Homo sapiens leucine-rich repeats and transmembrane domains 2, mRNA
(cDNA clone MGC:179719 IMAGE:40127648), complete cds.
ACCESSION BC150568
VERSION BC150568.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1202)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1202)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCG Plate: 26 Row: b Column: 9.
FEATURES Location/Qualifiers
source 1..1202
/db_xref="H-InvDB:HIT000435891"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:179719 IMAGE:40127648"
/tissue_type="PCR rescued clones, C list"
/clone_lib="NIH_MGC_398"
/note="Vector: pCR-Blunt II-TOPO with reversed insert;
Clone identification sequence tag: GACACCCC sequenced from
the reverse primer"
gene 1..1202
/gene="LRTM2"
/db_xref="GeneID:654429"
/db_xref="HGNC:HGNC:32443"
CDS 51..1163
/gene="LRTM2"
/codon_start=1
/product="leucine-rich repeats and transmembrane domains
2"
/protein_id="AAI50569.1"
/db_xref="GeneID:654429"
/db_xref="HGNC:HGNC:32443"
/translation="MLAPGSSPGQRGRLALQWRQVSWITCWIALYAVEALPTCPFSCK
CDSRSLEVDCSGLGLTTVPPDVPAATRTLLLLNNKLSALPSWAFANLSSLQRLDLSNN
FLDRLPRSIFGDLTNLTELQLRNNSIRTLDRDLLRHSPLLRHLDLSINGLAQLPPGLF
DGLLALRSLSLRSNRLQNLDRLTFEPLANLQLLQVGDNPWECDCNLREFKHWMEWFSY
RGGRLDQLACTLPKELRGKDMRMVPMEMFNYCSQLEDENSSAGLDIPGPPCTKASPEP
AKPKPGAEPEPEPSTACPQKQRHRPASVRRAMGTVIIAGVVCGVVCIMMVVAAAYGCI
YASLMAKYHRELKKRQPLMGDPEGEHEDQKQISSVA"
BASE COUNT 216 a 405 c 370 g 211 t
ORIGIN
1 ggctcctctc tccccagagc gacagggccc ggagagccgt gggcctcacc atgctggcgc
61 cgggcagcag ccctgggcag aggggcaggc tcgccctgca gtggaggcaa gtctcctgga
121 tcacctgctg gatcgccctg tatgctgtgg aggccctccc cacctgccct ttctcctgca
181 agtgtgacag ccgcagcctg gaggtggact gcagtggcct tggcctcacc acggtgcccc
241 cagacgtgcc cgcagccacc cgaaccctct tgctcttgaa caataagctg agtgccctgc
301 caagctgggc tttcgccaac ctctccagcc tgcagcggtt ggacctgtcc aacaacttcc
361 tggaccggct gccccgctcc attttcgggg acctgacgaa tctgactgag cttcagctgc
421 gcaataacag catcaggacc ctggacaggg acctgctgcg gcactcgccg ctgctccgcc
481 acctggacct gtccatcaac ggcctggccc agttgccccc tggtcttttc gacgggctcc
541 tggctctgcg ctccctctcg cttcgctcca accgtctgca gaatctggac cggctgacat
601 ttgaacccct agcaaacctg cagctgctgc aggtcgggga taacccctgg gagtgtgact
661 gtaacctgcg tgagttcaaa cactggatgg agtggttctc ctaccgaggg ggacgcttgg
721 accagcttgc ctgcaccctg cccaaggagc tgagggggaa ggacatgcgg atggtcccca
781 tggagatgtt caactactgc tcccagctgg aggacgagaa tagctcagct gggctggata
841 ttcctgggcc accctgcacc aaggccagtc cagagcctgc taagcccaag cccggggctg
901 agccggagcc ggagcccagc acagcctgcc cacagaagca gaggcaccgg ccggcgagcg
961 tgaggcgagc catgggcacg gtgatcattg caggggtcgt gtgcggcgtc gtctgcatca
1021 tgatggtggt ggccgctgcc tatggctgca tctacgcctc cctcatggcc aagtaccacc
1081 gggagctcaa aaagcgccag cccctgatgg gggaccccga gggcgagcac gaggaccaga
1141 agcagatctc ttctgtggcc tgagcgccca tccccacccg gccaggtagg aagggcgggg
1201 ag
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