LOCUS BC150330 4050 bp mRNA linear HUM 17-JUL-2007
DEFINITION Homo sapiens KRAB-A domain containing 1, mRNA (cDNA clone
MGC:167818 IMAGE:8860497), complete cds.
ACCESSION BC150330
VERSION BC150330.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4050)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4050)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Kazusa DNA Research Inst.
cDNA Library Preparation: Kazusa DNA Research Institute
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCF Plate: 14 Row: a Column: 7.
FEATURES Location/Qualifiers
source 1..4050
/db_xref="H-InvDB:HIT000435810"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:167818 IMAGE:8860497"
/tissue_type="Clones donated by Kazusa DNA Research Inst."
/clone_lib="Kazusa-KIAA-pBluescriptIISK+"
/lab_host="DH5alpha T1-resistant"
/note="Vector: pBluescript II SK+"
gene 1..4050
/gene="KRBA1"
/db_xref="GeneID:84626"
/db_xref="HGNC:HGNC:22228"
CDS 411..3503
/gene="KRBA1"
/codon_start=1
/product="KRAB-A domain containing 1"
/protein_id="AAI50331.1"
/db_xref="GeneID:84626"
/db_xref="HGNC:HGNC:22228"
/translation="MRENYETLVSVGTAELLPLSAFLSPSEPGRAVGGGSHADEGQEP
AGCGDPQGGQPRHSLHLTALVQLVKEIPEFLFGEVKGAMDSPESESRGASLDGERASP
EAAAAREPCPLRGLLSCLPDGPTSQPHLATTPTDSSCSSGPTGDGVQGSPLPIKTADK
PWPTRKEGPGALGGEPSPPTHSPSRRKSHRGQERGTSEAGISPGNSPLQGLINCLKEI
LVPGPRHPETSPSFLPPLPSLGTSRLTRADLGPGSPPWAVKTEAVSGDCPLQGLLHCL
KELPEAQDRHPSPSGVGNRRLQENPGAWKRGSGGPGYLLTPPPHPDLGAGGLLSVKME
NSWVQSPPGPASCQPGRQPLSPSATGDTRGVPQPSWGPEAQAASASSSPLEALEACLK
GIPPNGSSPSQLPPTSCSQNPQPGDSRSQKPELQPHRSHSEEATREPVLPLGLQSCVR
DGPSRPLAPRGTPTSFSSSSSTDWDLDFGSPVGNQGQHPGKGSPPGSSPLQGLENCLK
EIPVPVLRPAWPCSSAADRGPRRAEPRNWTADKEGLRAEACESARLGQGRGEAPTRSL
HLVSPQVFTSSCVPACHQRGFKDPGATRPGVWRWLPEGSAPKPSPLHCLESALRGILP
VRPLRFACVGGPSPSPSPGSSSSFSGSEGEDPRPEPELWKPLPQERDRLPSCKPPVPL
SPCPGGTPAGSSGGSPGEDPRRTEPRYCSGLGAGTAQDPCPVSQLEKRPRVSEASRGL
ELGHGRPRVAAKTHERLLPQGPPELPSESPPPELPPPEAAPPVLPASSLQPPCHCGKP
LQQELHSLGAALAEKLDRLATALAGLAQEVATMRTQVNRLGRRPQGPGPMGQASWMWT
LPRGPRWAHGPGHRHLPYWRQKGPTRPKPKILRGQGESCRAGDLQGLSRGTARRARPL
PPDAPPAEPPGLHCSSSQQLLSSTPSCHAAPPAHPLLAHTGGHQSPLPPLVPAALPLQ
GASPPAASADADVPTSGVAPDGIPERPKEPSSLLGGVQRALQEELWGGEHRDPRWGAH
"
BASE COUNT 779 a 1342 c 1259 g 670 t
ORIGIN
1 ccacgcgtcc gggcgcgcca ggtaaggcag gcggacgcgc ggacccctcg gcgcagtgcg
61 gccccgaagg cggtagggcg agaaagagct gggacccccc cgcaacttcg ggatcggctg
121 ggtgaggctg ggcaggcctg atgctcaggg gttcgtgccg ggaagttcag gtcctcggac
181 aacctctctc cagctctccg ccgccggtac ccacggccca gtctccacct ggggaaaccc
241 ccttggcgtg gcttgtttcg ttacaagtta tcctggtaga gtgggcatga aggcctcgga
301 ggcaactgtg cctgcaggtg tccatcacct tcaaggactt ggccgtgcgg ttctcggagg
361 aggagtggcg gctcctggag gaggggcaga gggagttcta ccgagacgtg atgcgggaga
421 actacgagac gctggtctct gtggggacag ctgagctgct ccccctctct gctttcctgt
481 caccctcaga gcctggaaga gctgttgggg gagggagcca cgctgatgag gggcaggagc
541 ctgctggttg tggagatccc caggggggac agccccggca cagcctgcac ctcacagccc
601 tggtgcagct ggtgaaggag atcccagagt tcttgtttgg agaagtcaag ggcgctatgg
661 acagccccga gagcgagagc cggggagcca gcctggatgg agagagagcg agccccgagg
721 cagctgcggc aagagagccc tgccctctcc gaggcctgct cagctgcctt ccagacggcc
781 ctaccagcca gccccacctg gccaccacgc ccaccgacag ctcgtgttcc agtggcccaa
841 ctggtgacgg ggtccaggga agtcctctcc ccatcaaaac tgccgacaaa ccgtggccta
901 caaggaagga aggcccagga gccctgggcg gggagcccag ccctcccacc catagcccca
961 gcaggaggaa gagccacaga ggacaggaga gagggacctc agaggccgga atttctcctg
1021 ggaacagccc cttgcaaggc ctcatcaact gtctgaagga aatccttgtg cctgggcccc
1081 ggcaccccga gacatcccca agcttcttgc cacctctccc tagcctgggc acgtccaggc
1141 taaccagagc agacctgggg cctgggagcc cgccctgggc agtgaagacc gaggcggttt
1201 caggggattg tcccctccag ggtctgctac actgtctgaa ggagctcccc gaggcccagg
1261 acaggcatcc cagtccctca ggagtgggga accgacggct acaggagaat ccaggagcct
1321 ggaaaagggg ttctggaggg cctggatacc tcctgacccc tcctccccat cctgatcttg
1381 gagctggcgg tctgctctct gtgaagatgg agaacagctg ggtccagagc cccccaggac
1441 ctgcatcctg tcagcctggc aggcagcccc tcagtccctc agccactgga gacaccagag
1501 gggtccccca acccagctgg ggccctgagg ctcaagctgc cagtgcctca agctcaccgc
1561 tggaagccct ggaagcctgt ctgaagggca ttcccccaaa tgggtcgtca ccttcccagc
1621 tgccacccac ttcttgttcc cagaaccccc agccaggaga ctctaggtct cagaagcctg
1681 aactgcaacc ccacagatca cacagtgaag aagcgaccag agagcctgtt ctgcctctgg
1741 gtctgcagag ctgtgtgaga gatggcccca gcaggcccct ggccccccga ggaaccccca
1801 ccagcttctc ctcatccagc agcaccgact gggacctgga ttttgggagt cctgtgggga
1861 accaggggca gcatcctgga aaaggaagcc caccaggaag ctccccactg cagggtctgg
1921 agaattgtct caaggagata cctgtgcctg tgctgcggcc tgcctggccc tgctcctcag
1981 cagcagacag gggaccgagg agagcagagc ccaggaactg gacagcagac aaggaaggac
2041 tgagggctga ggcctgcgag tcagcccgtc tcgggcaggg taggggagaa gcgcccaccc
2101 ggagcctcca tctggtcagc ccacaggtgt tcacctccag ctgcgtcccc gcctgccacc
2161 agcgggggtt caaagaccct ggggccacca ggccaggagt gtggaggtgg ctcccagagg
2221 ggtctgcccc caagccctcc ccgctgcact gcctggagag cgccctgagg gggatcttgc
2281 ctgtaaggcc cttgcgcttc gcctgcgtgg gaggccccag ccccagcccc agccccggct
2341 ccagctcgag cttcagcggc tctgaaggag aagacccgag gccagagcct gagctctgga
2401 agccgctccc ccaggagagg gaccgccttc ccagctgtaa gcctcctgtc cctctgtccc
2461 catgtcctgg tgggacccct gctggcagca gtggcggcag ccctggtgaa gaccccagga
2521 gaacagagcc caggtactgc agcggcctcg gtgcaggtac agctcaggat ccctgcccgg
2581 tttctcagct ggagaaaagg cccagggtta gtgaagcatc cagaggcctg gagcttggac
2641 atggaagacc cagagttgca gccaagaccc atgagaggct gctcccccag ggcccgcctg
2701 agctgcccag tgagtctccc cctccggagc tgccccctcc ggaagctgcg cctcctgtgt
2761 tgccagcctc ctccctgcag ccgccatgcc actgtgggaa gcccctgcag caggagctgc
2821 acagcctcgg tgctgccctt gcggagaagc tggatcggct cgccacagcg ctggcaggcc
2881 tggctcagga agtggccacc atgaggaccc aggtgaatcg gctggggagg cgcccccaag
2941 gccctgggcc aatgggccaa gcttcctgga tgtggaccct cccacgggga cctcgctggg
3001 ctcatggccc tggtcacaga catctgccct actggaggca gaagggaccc acgaggccta
3061 aaccaaagat cctgcgtggc cagggagaga gctgcagggc tggtgacctg caaggactct
3121 ccagagggac cgctcgccgg gcacgtccgc tgcctccaga cgctcccccg gcagaacctc
3181 ctgggctcca ctgcagctct tcccagcagc tgctgtcctc tacacccagc tgccatgctg
3241 cgccgcctgc acaccccctc ctcgcacata ccgggggcca ccagagcccc cttccccctt
3301 tagtgcctgc tgccttaccc ctgcagggag cctctcctcc tgcagccagt gcagatgcag
3361 acgtgccgac ctcaggagtg gcaccagacg ggatcccaga gcggcccaag gagccgagca
3421 gcctgctggg aggagtgcag agggccctcc aggaagaact gtggggtggg gagcacaggg
3481 acccgagatg gggggcgcat tgatggcatt cctcttctcc acatctgctc gttcttgccg
3541 agggtgcagt ggtggcgtgg aagccctgtc accccacccc aggccaccct ctcccagagg
3601 acgccatctc ccttactgtt gctgggagcc tcgccctttg tcccaactgg gtagagcccc
3661 caggtgctgt ttgctcagga ggctgctgtg ggggtgcctt cctcagcctc tggccctctt
3721 ggctcagatt caatcaaatg ttgcttccct ctcctgtctt tcccactgga gccgcccaag
3781 cttgtaggtg ggtggtgtgc ataggccacg tgtgccccac atatgcaggg ggtgccccac
3841 acagctagag cggccaggag agcgcctcct aaccaccagc cgttcctgat ctcaggagcc
3901 ttgaagggct gggctcttgc cttcctggag taaatattgg cacagatttc atttgagaga
3961 actcagcccc ctggtctaag ctggacttac ctctgtggat tctgaaatta aagaagtgag
4021 ttgctaagga aaaaaaaaaa aaaaaaaaaa
//