LOCUS BC150278 6975 bp mRNA linear HUM 17-JUL-2007
DEFINITION Homo sapiens kinetochore associated 1, mRNA (cDNA clone MGC:166889
IMAGE:9007259), complete cds.
ACCESSION BC150278
VERSION BC150278.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6975)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 6975)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Kazusa DNA Research Inst.
cDNA Library Preparation: Kazusa DNA Research Institute
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCF Plate: 9 Row: h Column: 8.
FEATURES Location/Qualifiers
source 1..6975
/db_xref="H-InvDB:HIT000435774"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:166889 IMAGE:9007259"
/tissue_type="Clones donated by Kazusa DNA Research Inst."
/clone_lib="Kazusa-KIAA-pBluescriptIISK+"
/lab_host="DH5alpha T1-resistant"
/note="Vector: pBluescript II SK+"
gene 1..6975
/gene="KNTC1"
/gene_synonym="ROD"
/db_xref="GeneID:9735"
/db_xref="HGNC:HGNC:17255"
/db_xref="MIM:607363"
CDS 164..6793
/gene="KNTC1"
/gene_synonym="ROD"
/codon_start=1
/product="kinetochore associated 1"
/protein_id="AAI50279.1"
/db_xref="GeneID:9735"
/db_xref="HGNC:HGNC:17255"
/db_xref="MIM:607363"
/translation="MWNDIELLTNDDTGSGYLSVGSRKEHGTALYQVDLLVKISSEKA
SLNPKIQACSLSDGFIIVADQSVILLDSICRSLQLHLVFDTEVDVVGLCQEGKFLLVG
ERSGNLHLIHVTSKQTLLTNAFVQKANDENRRTYQNLVIEKDGSNEGTYYMLLLTYSG
FFCITNLQLLKIQQAIENVDFSTAKKLQGQIKSSFISTENYHTLGCLSLVAGDLASEV
PVIIGGTGNCAFSKWEPDSSKKGMTVKNLIDAEIIKGAKKFQLIDNLLFVLDTDNVLS
LWDIYTLTPVWNWPSLHVEEFLLTTEADSPSSVTWQGITNLKLIALTASANKKMKNLM
VYSLPTMEILYSLEVSSVSSLVQTGISTDTIYLLEGVCKNDPKLSEDSVSVLVLRCLT
EALPENRLSRLLHKHRFAEAESFAIQFGLDVELVYKVKSNHILEKLALSSVDASEQTE
WQQLVDDAKENLHKIQDDEFVVNYCLKAQWITYETTQEMLNYAKTRLLKKEDKTALIY
SDGLKEVLRAHAKLTTFYGAFGPEKFSGSSWIEFLNNEDDLKDIFLQLKEGNLVCAQY
LWLRHRANFESRFDVKMLESLLNSMSASVSLQKLCPWFKNDVIPFVRRTVPEGQIILA
KWLEQAARNLELTDKANWPENGLQLAEIFFTAEKTDELGLASSWHWISLKDYQNTEEV
CQLRTLVNNLRELITLHRKYNCKLALSDFEKENTTTIVFRMFDKVLAPELIPSILEKF
IRVYMREHDLQEEELLLLYIEDLLNRCSSKSTSLFETAWEAKAMAVIACLSDTDLIFD
AVLKIMYAAVVPWSAAVEQLVKQHLEMDHPKVKLLQESYKLMEMKKLLRGYGIREVNL
LNKEIMRVVRYILKQDVPSSLEDALKVAQAFMLSDDEIYSLRIIDLIDREQGEDCLLL
LKSLPPAEAEKTAERVIIWARLALQEEPDHSKEGKAWRMSVAKTSVDILKILCDIQKD
NLQKKDECEEMLKLFKEVASLQENFEVFLSFEDYSNSSLVADLREQHIKAHEVAQAKH
KPGSTPEPIAAEVRSPSMESKLHRQALALQMSKQELEAELTLRALKDGNIKTALKKCS
DLFKYHCNADTGKLLFLTCQKLCQMLADNVPVTVPVGLNLPSMIHDLASQAATICSPD
FLLDALELCKHTLMAVELSRQCQMDDCGILMKASFGTHKDPYEEWSYSDFFSEDGIVL
ESQMVLPVIYELISSLVPLAESKRYPLESTSLPYCSLNEGDGLVLPVINSISALLQNL
QESSQWELALRFVVGSFGTCLQHSVSNFMNATLSEKLFGETTLVKSRHVVMELKEKAV
IFIRENATTLLHKVFNCRLVDLDLALGYCTLLPQKDVFENLWKLIDKAWQNYDKILAI
SLVGSELASLYQEIEMGLKFRELSTDAQWGIRLGKLGISFQPVFRQHFLTKKDLIKAL
VENIDMDTSLILEYCSTFQLDCDAVLQLFIETLLHNTNAGQGQGDASMDSAKRRHPKL
LAKALEMVPLLTSTKDLVISLSGILHKLDPYDYEMIEVVLKVIERADEKITNININQA
LSILKHLKSYRRISPPVDLEYQYMLEHVITLPSAAQTRLPFHLIFFGTAQNFWKILST
ELSEESFPTLLLISKLMKFSLDTLYVSTAKHVFEKKLKPKLLKLTQAKSSTLINKEIT
KITQTIESCLLSIVNPEWAVAIAISLAQDIPEGSFKISALKFCLYLAERWLQNIPSQD
EKREKAEALLKKLHIQYRRSGTEAVLIAHKLNTEEYLRVIGKPAHLIVSLYEHPSINQ
RIQNSSGTDYPDIHAAAKEIAEVNEINLEKVWDMLLEKWLCPSTKPGEKPSELFELQE
DEALRRVQYLLLSRPIDYSSRMLFVFATSTTTTLGMHQLTFAHRTRALQCLFYLADKE
TIESLFKKPIEEVKSYLRCITFLASFETLNIPITYELFCSSPKEGMIKGLWKNHSHES
MAVRLVTELCLEYKIYDLQLWNGLLQKLLGFNMIPYLRKVLKAISSIHSLWQVPYFSK
AWQRVIQIPLLSASCPLSPDQLSDCSESLIAVLECPVSGDLDLIGVARQYIQLELPAF
ALACLMLMPHSEKRHQQIKNFLGSCDPQVILKQLEEHMNTGQLAGFSHQIRSLILNNI
INKKEFGILAKTKYFQMLKMHAMNTNNITELVNYLANDLSLDEASVLITEYSKHCGKP
VPPDTAPCEILKMFLSGLS"
BASE COUNT 2194 a 1323 c 1474 g 1984 t
ORIGIN
1 ggcatggaac ctaaagacta gaggcggttg tgtgagtcag gaagaggggc cagatatctg
61 agtgttcctc tttagtttct tcaattgcag ataatatggt gtctaatttt atgttgttca
121 ggaaagacag tggttcctga ctcaggaaga cagtctcaga aacatgtgga atgatattga
181 gctgctaaca aatgatgata ccggaagtgg gtacctgagt gtcggttcaa gaaaagaaca
241 tggaactgct ttatatcaag tagatttgct agtgaagatc tcttctgaaa aggcctcatt
301 aaatccaaag atacaggcat gcagcttaag tgatgggttt attattgtag ccgaccaatc
361 agtgatattg cttgacagta tttgtagatc acttcaattg catcttgtct ttgatactga
421 agtggatgta gttggccttt gtcaagaagg aaagtttctt ttggttggcg agagaagtgg
481 caacctacat cttattcatg taacatcaaa acaaacacta ctcactaatg catttgttca
541 gaaagctaac gatgaaaatc ggcggactta ccagaatctt gtcattgaga aggatggttc
601 aaatgaaggt acctattata tgctacttct tacatacagt ggattttttt gtattacaaa
661 ccttcagctt ttaaaaattc aacaagcaat tgagaatgta gacttcagta cagcaaaaaa
721 gttacaagga caaatcaagt ccagttttat ttctactgaa aattatcata ctcttggttg
781 tctcagtctt gtggctggag atttagcaag tgaagttcct gtgataattg ggggaaccgg
841 taattgtgca ttctcaaaat gggaaccaga ttcttccaag aaaggaatga cagttaagaa
901 ccttattgat gcagagatta ttaaaggtgc aaagaagttc cagctgatag acaatctact
961 ttttgttctt gatactgata acgtgctgag tttatgggat atttacactc taactcctgt
1021 atggaactgg ccctctcttc acgtagaaga gtttcttctt actacagaag cagactctcc
1081 ttcatcagtc acgtggcaag gaattacaaa tctcaaatta atagctctga cagcttcagc
1141 taataagaag atgaaaaacc tcatggttta ttcattacct acaatggaaa tactatattc
1201 tttggaagta tctagtgttt cttctctggt ccaaacagga attagcacag ataccatata
1261 ccttttagaa ggagtttgca aaaatgatcc aaaattgtct gaagactcag tctctgtgtt
1321 agtactcaga tgtcttacgg aagctttacc agaaaacaga ttgagtcggt tacttcacaa
1381 acacagattt gctgaagctg agagttttgc cattcagttt ggactagatg ttgagcttgt
1441 ttacaaggtc aagtcaaatc atatattgga gaaactggca ttgagttctg tggatgccag
1501 tgaacagacc gaatggcaac aacttgtaga cgacgctaag gaaaatctac ataagatcca
1561 ggatgatgaa tttgtggtga attactgcct gaaagctcag tggataacct atgaaaccac
1621 tcaagagatg ctgaattatg ccaaaaccag gcttttgaag aaagaagata aaactgctct
1681 catttattct gatggcttga aagaggtgct aagagctcat gcaaaattga ctacttttta
1741 tggagcattt ggaccagaaa aattcagtgg cagttcttgg attgaatttc taaataatga
1801 agatgatctt aaagatattt ttttacagct aaaagaagga aaccttgttt gtgcacagta
1861 tctttggctt cgacatcggg caaactttga aagcagattt gatgtgaaaa tgctggagag
1921 cttgctcaac tcaatgtctg catcagtctc tttgcaaaag ctgtgtccat ggtttaaaaa
1981 tgatgtgatt ccatttgtaa gaaggactgt gcctgaagga cagataattc ttgcaaaatg
2041 gttggaacaa gcagccagga accttgaatt aactgataag gcaaattggc cagaaaatgg
2101 acttcaattg gcagagatat tttttacagc agaaaaaaca gacgagttgg gattggcatc
2161 ttcctggcat tggatttcct tgaaagatta tcagaacaca gaggaagtat gtcagctaag
2221 gactttggta aataacttgc gagagttgat cacgttgcat aggaagtaca actgcaaatt
2281 agccctctct gattttgaga aggaaaatac aaccaccata gtgttccgaa tgtttgataa
2341 agtgctggcc ccagagctta ttccctccat cttagagaag tttataagag tttacatgag
2401 agaacatgac ttgcaagagg aggaacttct cttgctgtac atagaggatt tactgaatag
2461 atgcagctca aagtccacat cactctttga aacagcatgg gaagcaaagg ccatggcagt
2521 aatagcgtgt ttatctgaca cggacctcat atttgatgcc gtgctcaaga tcatgtatgc
2581 ggcagtggtt ccttggagtg cagctgtgga gcaactggtg aaacagcacc tggaaatgga
2641 ccatcccaaa gtcaagttat tacaggaaag ttacaaacta atggagatga aaaaactttt
2701 acgaggctat ggaataagag aggtaaatct cttaaacaag gaaataatga gagtggttag
2761 atacattctc aaacaagatg tcccatcttc tttagaagat gctttaaagg tagcccaagc
2821 gtttatgtta tctgatgatg agatctacag tctaagaatt attgacctga ttgatagaga
2881 acagggtgaa gactgtctcc ttctgttgaa gtctttgcct cctgctgaag ctgagaaaac
2941 tgcagaaaga gtcatcatat gggcacgact ggcattacaa gaagagccag atcattctaa
3001 agagggcaag gcctggagaa tgtctgtagc gaagacatcc gtggacattc ttaagatact
3061 atgtgacatt cagaaagaca atctgcagaa gaaggacgaa tgtgaagaaa tgttgaaact
3121 atttaaagag gttgctagct tacaggagaa ctttgaggtc tttctttcat ttgaagatta
3181 tagcaatagt tccctggtag cagatctccg tgagcagcac attaaagctc acgaagttgc
3241 acaggcgaaa cacaaacctg ggagcacccc agagcccata gctgctgagg tgaggagccc
3301 aagcatggaa tcaaagctgc acagacaggc actggccctg cagatgtcca aacaagagct
3361 ggaggcagag ctgaccttga gagccttaaa agatgggaac atcaaaacag cactgaaaaa
3421 atgcagcgac ttgtttaagt atcactgcaa tgctgacact gggaaattgc tatttctgac
3481 atgtcagaag ctttgtcaga tgttggctga taatgtccca gtgacagtgc ctgtgggact
3541 gaatcttcct tccatgatac atgatctagc aagccaagct gccaccattt gcagtccaga
3601 ttttttacta gatgctttag aactatgtaa acatacttta atggctgtag agctttccag
3661 acaatgccaa atggatgact gtggaatcct catgaaagct tcttttggga cacataaaga
3721 tccatatgaa gagtggtctt acagtgactt cttcagtgaa gatggaattg ttcttgagtc
3781 acagatggtg cttccagtga tttatgaact gatttcatct cttgtgcctc tagctgaaag
3841 caagagatat cccttggagt ctaccagttt gccatactgc tcccttaatg aaggagatgg
3901 ccttgtttta cctgttataa attccatctc tgccctgctt cagaatcttc aggaatctag
3961 ccagtgggag ctagccctaa gatttgtggt tggttcattt ggtacctgtc ttcagcactc
4021 tgtgtcaaac ttcatgaatg ccactttgag tgaaaagtta tttggagaga ctacattagt
4081 taaatcaagg catgttgtta tggaattgaa agaaaaagct gttatattta tcagggaaaa
4141 tgctacaaca ctactgcaca aagtatttaa ttgtcgcttg gtagatcttg acctggcgtt
4201 gggttactgc actctcttac ctcaaaaaga tgtgtttgaa aatctctgga agctcataga
4261 taaagcatgg cagaattacg acaaaatctt ggcaatatct ctggtgggct ctgagctggc
4321 aagtctctat caggaaatag aaatggggct taagttccgt gaactcagta ctgatgccca
4381 gtggggcatt cgtcttggta aacttggtat ttcttttcaa ccagttttca ggcaacattt
4441 tctcaccaag aaagacctca ttaaagctct tgtggagaat atagatatgg acacaagcct
4501 cattttggaa tattgcagca catttcagtt ggactgcgat gcagttcttc agctcttcat
4561 tgaaacgctg ctccacaaca caaatgccgg ccaaggccag ggagatgcaa gcatggactc
4621 tgcaaagcgg cggcatccca aactcctggc caaagccctt gagatggttc ctttactgac
4681 gagcacaaaa gatttggtca tcagtcttag tggaatacta cataagctgg atccttatga
4741 ctatgaaatg attgaagttg tcttgaaagt tatagaacga gctgatgaaa agataaccaa
4801 tattaatatt aatcaggcat tgagtattct gaaacatttg aagtcataca gaagaatttc
4861 tcctcccgtg gatctagaat atcagtatat gttggaacat gtcataactt tgccatcagc
4921 tgcccaaact agactgcctt ttcacctgat attctttggc acagcacaga acttctggaa
4981 aattctctct acagaactca gtgaagaatc tttcccaaca ttgctcttaa tttcgaaatt
5041 aatgaagttc tctctggaca ctctgtacgt gtctacagca aaacacgttt tcgaaaaaaa
5101 actgaagcca aagctcctga agttaacaca agctaaatcc tcaacactga ttaacaagga
5161 aataactaag atcacgcaga ccatcgaatc ctgcttactc tctatagtca acccagagtg
5221 ggctgtagct attgccatca gccttgccca ggatatccct gaaggttcct tcaagatatc
5281 tgctttgaaa ttctgccttt atttagctga gagatggcta cagaatatcc catcgcagga
5341 cgaaaaacgt gaaaaagccg aggctttgtt gaagaagctt catatccagt accggcgatc
5401 gggcacagaa gctgtgctca tagcccacaa gctgaacact gaggaatatt taagagtgat
5461 cggaaagcca gcacatctta ttgtcagtct ctacgaacat cctagcatca atcaaagaat
5521 tcagaattca tctggcacag attatcctga tattcatgca gcagctaaag aaatagccga
5581 agtcaatgaa attaatttgg aaaaagtctg ggacatgttg ttggaaaaat ggctatgccc
5641 ttcaacaaaa cctggtgaaa aaccatcaga attatttgaa cttcaagaag atgaagccct
5701 acgaagagtg cagtatctcc tcctgtctcg tccaattgat tatagttcaa gaatgctgtt
5761 tgtatttgca acatcaacta caaccacatt aggtatgcat cagttaactt ttgcccatag
5821 aactcgagct cttcagtgtc tcttctattt ggctgacaag gaaactatag aatctctctt
5881 taaaaaaccc attgaagaag tgaaatctta tttgagatgt ataacttttc tggcatcatt
5941 tgagactttg aatatcccca tcacatatga attattttgc agcagtccta aagaaggaat
6001 gattaagggt ctgtggaaaa accacagcca cgagtccatg gcagtaagat tggtgactga
6061 gctgtgttta gaatacaaaa tctatgacct gcagctttgg aatggactct tgcaaaagct
6121 tctgggcttc aatatgattc cttatctaag gaaagtttta aaagccatct ccagtatcca
6181 ttctttatgg caggttccct acttcagcaa agcgtggcag cgtgtgatac agataccact
6241 gctttcagcc tcttgtcctt taagtcctga tcagctgtca gattgttctg agagtctcat
6301 cgctgtcctc gaatgtccag tctcaggtga tcttgacctg atcggagtcg ccaggcagta
6361 tatccagtta gaacttccgg cttttgcatt agcttgtctg atgctcatgc cccactcaga
6421 gaaaagacac cagcaaatta agaattttct gggttcctgt gaccctcagg ttattttaaa
6481 gcaattggaa gagcatatga acacgggcca gctagcagga ttttcacatc aaattagaag
6541 tctgattttg aataatatca tcaataagaa ggagtttggg attttggcaa agaccaaata
6601 ctttcaaatg ttgaagatgc atgcgatgaa taccaacaat atcactgagc tagtgaacta
6661 tttggcaaat gacttaagtt tagatgaagc ttcagtcttg ataactgaat attcaaagca
6721 ctgcgggaaa cctgtgcctc cagacactgc tccctgtgaa attctgaaga tgtttcttag
6781 tggattatcg taaatcactg aacctttttt tcaagaagga caagaatttt ggagtctgct
6841 attaatggac catatttatt acagttttta aattgtacaa tctctgtatt atagctattt
6901 gtctaacatt accccacatg taataaataa aacaatatga gcaaaaaaaa aaaaaaaaaa
6961 aaaaaaaaaa aaaaa
//