LOCUS BC150258 6828 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens ArfGAP with RhoGAP domain, ankyrin repeat and PH
domain 2, mRNA (cDNA clone IMAGE:9007188), partial cds.
ACCESSION BC150258
VERSION BC150258.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 6828)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 6828)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-JUL-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Kazusa DNA Research Inst.
cDNA Library Preparation: Kazusa DNA Research Institute
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCF Plate: 9 Row: a Column: 1.
FEATURES Location/Qualifiers
source 1..6828
/db_xref="H-InvDB:HIT000435754"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:9007188"
/tissue_type="Clones donated by Kazusa DNA Research Inst."
/clone_lib="Kazusa-KIAA-pBluescriptIISK+"
/lab_host="DH5alpha T1-resistant"
/note="Vector: pBluescript II SK+"
gene <1..6828
/gene="ARAP2"
/gene_synonym="PARX"
/db_xref="GeneID:116984"
/db_xref="HGNC:HGNC:16924"
/db_xref="MIM:606645"
CDS <1..4907
/gene="ARAP2"
/gene_synonym="PARX"
/codon_start=3
/product="ARAP2 protein"
/protein_id="AAI50259.1"
/db_xref="GeneID:116984"
/db_xref="HGNC:HGNC:16924"
/db_xref="MIM:606645"
/translation="TRPIPIYANVHKTKKNDDPSKDYHVPSSDQNICIELSNSGSVQT
SSPPQLETVRKNLEDSDASVERSQYPQSDDKLSPPKRDFPTAEEPHLNLGSLNDSLFG
SDNIKIESLITKKTVDHTVEEQQTEKVKLITENLSKLPNADSECLSFVGCSTSGTNSG
NGTNGLLEGSPPSPFFKFQGEMIVNDLYVPSSPILAPVRSRSKLVSRPSRSFLLRHRP
VPEIPGSTKGVSGSYFRERRNVATSTEKSVAWQNSNEENSSSIFPYGETFLFQRLENS
KKRSIKNEFLTQGEALKGEAATATNSFIIKSSIYDNRKEKISEDKVEDIWIPREDKNN
FLIDTASESEYSTVEECFQSLRRKNSKASKSRTQKALILDSVNRHSYPLSSTSGNADS
SAVSSQAISPYACFYGASAKKVKSGWLDKLSPQGKRMFQKRWVKFDGLSISYYNNEKE
MYSKGIIPLSAISTVRVQGDNKFEVVTTQRTFVFRVEKEEERNDWISILLNALKSQSL
TSQSQAVVTPEKCGYLELRGYKAKIFTVLSGNSVWLCKNEQDFKSGLGITIIPMNVAN
VKQVDRTVKQSFEIITPYRSFSFTAETEKEKQDWIEAVQQSIAETLSDYEVAEKIWFN
ESNRSCADCKAPDPDWASINLCVVICKKCAGQHRSLGPKDSKVRSLKMDASIWSNELI
ELFIVIGNKRANDFWAGNLQKDEELHMDSPVEKRKNFITQKYKEGKFRKTLLASLTKE
ELNKALCAAVVKPDVLETMALLFSGADVMCATGDPVHSTPYLLAKKAGQSLQMEFLYH
NKFSDFPQHDIHSEGVLSQESSQSTFLCDFLYQAPSAASKLSSEKKLLEETNKKWCVL
EGGFLSYYENDKSTTPNGTININEVICLAIHKEDFYLNTGPIFIFEIYLPSERVFLFG
AETSQAQRKWTEAIAKHFVPLFAENLTEADYDLIGQLFYKDCHALDQWRKGWFAMDKS
SLHFCLQMQEVQGDRMHLRRLQELTISTMVQNGEKLDVLLLVEKGRTLYIHGHTKLDF
TVWHTAIEKAAGTDGNALQDQQLSKNDVPIIVNSCIAFVTQYGLGCKYIYQKNGDPLH
ISELLESFKKDARSFKLRAGKHQLEDVTAVLKSFLSDIDDALLTKELYPYWISALDTQ
DDKERIKKYGAFIRSLPGVNRATLAAIIEHLYRVQKCSEINHMNAHNLALVFSSCLFQ
TKGQTSEEVNVIEDLINNYVEIFEVKEDQVKQMDIENSFITKWKDTQVSQAGDLLIEV
YVERKEPDCSIIIRISPVMEAEELTNDILAIKNIIPTKGDIWATFEVIENEELERPLH
YKENVLEQVLRWSSLAEPGSAYLVVKRFLTADTIKHCSDRSTLGSIKEGILKIKEEPS
KILSGNKFQDRYFVLRDGFLFLYKDVKSSKHDKMFSLSSMKFYRGVKKKMKPPTSWGL
TAYSEKHHWHLCCDSSQTQTEWMTSIFIAQHEYDIWPPAGKERKRSITKNPKIGGLPL
IPIQHEGNATLARKNIESARAELERLRLSEKCDKESVDSSLKERASMVAHCLEHKDDK
LRNRPRKHRSFNCLEDTEPEAPLGQPKGHKGLKTLRKTEDRNSKATLDSDHKLPSRVI
EELNVVLQRSRTLPKELQDEQILK"
BASE COUNT 2280 a 1175 c 1390 g 1983 t
ORIGIN
1 ccacgcgtcc gattccaata tatgcaaatg ttcataaaac taagaagaat gatgaccctt
61 caaaggatta ccatgttcca tcttctgatc agaatatctg catagaactt tccaattctg
121 gtagtgttca gacatctagc ccaccgcagt tggagactgt tagaaaaaat cttgaagaca
181 gtgatgcaag tgtggaaaga agccagtatc ctcaatcaga tgataagctg tctcctccta
241 aacgcgactt ccccactgca gaggaaccac acctgaattt gggttctttg aatgattctt
301 tatttggtag tgacaatatt aaaatagaat cattgattac aaagaagact gtggatcaca
361 cagttgaaga acaacaaaca gaaaaagtta aattgatcac agaaaatctc agtaagctcc
421 ctaatgcaga ctctgaatgc ctttcttttg ttggctgttc aacatcagga acaaattctg
481 gaaatggaac aaatggttta ttagaaggat caccaccatc cccattcttt aagtttcaag
541 gagaaatgat tgtaaatgac ttgtatgttc catcatcacc aatcctagca cctgtgagaa
601 gtcgtagcaa gttggtttca agaccatctc gatcttttct gctaagacat cgacctgtac
661 cagagattcc agggtcaaca aaaggagttt ctgggagcta tttccgtgaa agaagaaatg
721 ttgctacctc aactgaaaaa tctgtggcat ggcaaaattc aaatgaggag aattcatctt
781 ccatctttcc ttatggagag acctttctct tccagagact agaaaattcc aagaagcgat
841 ctataaagaa tgaatttttg acccagggag aagcactcaa aggggaagca gctactgcaa
901 caaactcttt tatcatcaaa tcaagcatat acgataacag aaaggagaaa ataagcgagg
961 acaaggtgga agatatttgg atacctcgag aggacaaaaa caattttttg atagacactg
1021 cttctgaatc agaatactca acagtagaag aatgctttca gagtttaaga agaaaaaatt
1081 caaaggcatc taaatctagg actcaaaaag ccttgatttt ggactccgtt aataggcaca
1141 gttatccgtt aagctcaaca agtggaaatg ctgattcatc agccgtttct tcacaggcaa
1201 tatctcccta tgcctgcttt tatggagcat ctgcaaagaa ggttaaatca ggatggctgg
1261 ataaactctc tcctcaagga aaacgcatgt ttcaaaagag atgggtgaaa tttgatggcc
1321 ttagcatttc ttactacaat aatgagaagg agatgtattc gaaaggaata attccccttt
1381 ctgctatatc aacagtacga gttcaaggag acaacaaatt tgaagttgtt acaacacaaa
1441 gaacttttgt ttttagagta gaaaaagaag aggagagaaa tgactggatc agcatactat
1501 taaatgcact gaaatcacaa tcccttacct cgcagtctca agctgttgtt acacctgaga
1561 aatgtggata tcttgaattg agaggctata aggcaaaaat ttttactgtg ttaagtggaa
1621 acagtgtgtg gctttgcaaa aacgaacagg attttaagag tggacttggt attaccataa
1681 ttcctatgaa tgtagcaaat gtaaagcaag tggaccgaac tgtgaaacaa tcttttgaaa
1741 taatcactcc ctacaggagt ttcagcttta cagccgagac tgaaaaggag aaacaagact
1801 ggattgaagc tgtgcagcaa tcaatagcag aaactctctc tgattatgaa gtagctgaga
1861 agatttggtt caatgaatcc aacaggagct gtgcagattg taaagcccca gatcctgact
1921 gggcatccat caatctctgt gttgtcatct gtaagaagtg tgcaggacag catagatctt
1981 taggaccaaa agattccaag gttagaagtc taaaaatgga tgctagcatt tggagcaatg
2041 aactcatcga gctttttatt gtcattggaa acaaaagagc aaatgacttt tgggctggta
2101 atcttcaaaa ggatgaagaa ttacatatgg actcaccagt agaaaagaga aaaaacttta
2161 ttactcagaa atataaagaa ggaaaattca gaaaaactct tttggcatct ctcaccaaag
2221 aagaattaaa taaggctcta tgtgctgctg tagtgaaacc ggatgttcta gaaacaatgg
2281 ctttgctgtt cagtggagca gatgtcatgt gtgccaccgg agaccccgtg catagcaccc
2341 cctatctgct agccaagaaa gctgggcaaa gtctgcaaat ggaatttctc taccataaca
2401 aattctcaga tttccctcaa catgatattc attccgaggg tgtattaagt caagagtctt
2461 cccagtccac attcctctgt gactttttat atcaagctcc ttctgctgct tctaaactct
2521 cttcagagaa aaaactgctt gaagagacaa ataaaaaatg gtgtgttttg gaaggaggct
2581 tcttgagtta ctatgaaaat gataagtcta ccacacctaa tggcaccatt aatatcaatg
2641 aagttatctg cctggctata cacaaagagg acttctattt aaatactggg cccatcttta
2701 tctttgagat ctacttaccc tccgaacgtg tgtttttatt tggagctgaa acatctcaag
2761 ctcaaagaaa atggacagag gcaatagcca agcattttgt tcccttattt gctgaaaact
2821 taacagaagc tgactatgat ttgattggtc aactcttcta caaagactgc catgccctgg
2881 atcagtggag aaaaggctgg tttgctatgg acaaatccag cttgcatttt tgccttcaaa
2941 tgcaagaagt tcagggagat agaatgcact taagaagact gcaagagcta acaatcagca
3001 caatggttca aaatggggaa aaactggatg ttttactctt ggtagaaaaa gggagaacat
3061 tatacatcca tgggcatacc aagttggatt tcacagtctg gcatactgca attgaaaaag
3121 cagcaggtac agatggtaat gctttacaag atcagcagct cagcaaaaat gacgttccca
3181 ttatagtgaa cagctgtata gcatttgtta cacagtatgg tttaggatgc aaatatatct
3241 atcaaaagaa tggtgatcct ttgcatataa gtgaactcct ggagagtttc aaaaaggatg
3301 caagaagctt taaattgagg gctggaaaac atcagcttga agatgtgacg gctgtgttga
3361 aaagttttct ctctgacatt gatgatgcac tgcttactaa ggagctctac ccatattgga
3421 tctctgcttt agatacgcaa gatgacaagg aaagaattaa aaaatatgga gcatttatac
3481 gttctcttcc aggggtcaac cgagcaacac tagcagctat cattgaacac ctgtataggg
3541 ttcagaaatg ctcagaaatc aatcacatga atgcccataa tttggccttg gtcttttcat
3601 cctgtttgtt tcaaacgaag ggacaaacta gtgaagaagt gaatgtaatt gaggacctaa
3661 ttaataatta tgtagaaata tttgaggtta aagaagatca agtcaaacaa atggacatag
3721 aaaatagctt tattaccaag tggaaagaca cccaagtttc ccaggctgga gatttgttaa
3781 ttgaagtata tgtagaaagg aaggaacccg actgtagtat tataattcgg atatctcctg
3841 tgatggaagc agaagaatta actaatgata tattagcgat aaaaaatatt attcctacaa
3901 aaggtgatat ttgggccaca tttgaagtca ttgaaaatga agagctagag cgtcctcttc
3961 actacaagga aaatgtactg gagcaggtgc ttcggtggag ttcattagct gaacctggct
4021 ctgcttacct ggtggtgaag agattcttaa ccgctgacac aattaaacac tgcagtgacc
4081 ggagtacact gggaagcatc aaagaaggaa tcttgaaaat caaagaagaa ccatccaaaa
4141 tactatctgg aaataagttt caagaccggt attttgtttt acgagatggg tttctctttc
4201 tttacaagga tgtgaagagt agtaaacatg acaagatgtt ttctctcagt tccatgaagt
4261 tttatcgtgg agtgaaaaag aaaatgaagc ctccaacaag ctggggattg accgcatatt
4321 ctgagaaaca tcactggcac ctgtgttgtg atagttcaca aactcagacg gagtggatga
4381 ccagtatctt tattgcccag catgaatatg atatatggcc accagctgga aaggaacgaa
4441 aacgttcaat aaccaaaaat cccaaaattg gaggtttgcc tctgattcct atacagcatg
4501 aggggaatgc aaccttggcc cggaaaaata ttgagagtgc aagagcagaa cttgaaaggc
4561 tgcggctcag tgaaaagtgt gataaagagt ccgtggactc tagcttaaag gagagagctt
4621 ccatggtggc ccactgcctg gagcacaagg acgataaact tcgaaatcga ccccgaaaac
4681 atcggagttt caactgcctg gaggacacag agcctgaagc cccacttggg caaccaaaag
4741 gccataaagg cctaaagaca ttgaggaaga ctgaggacag gaatagcaaa gctactttgg
4801 actctgatca taagttacca tcaagggtaa ttgaagaact taatgtggtt ctacaacggt
4861 caagaaccct tccaaaagaa ttacaggatg agcagatttt gaagtaggaa ataaaatgaa
4921 ttgctcccca gattattttt ttaatattgt atgcaatctt tatgtgtaac tccaaaactg
4981 aactataaga taattcataa gaatttgcct attgataggc aaatttgtct atgcttaggc
5041 atttaaggag catttaaaaa tatgtatata tgtgactgaa tgtaagatta actttatttt
5101 ggtctgaaca aaccttgtaa agttccattg tattaacgtg tgtaagaaga cattgggtta
5161 cttaggtggt cagtcctttt aaagtagttg tctgttaagt ggtataattt atgagcagaa
5221 atctcaaact gtactgtatt gtataaaatg ctgtgtttaa atgaagccta agaaactatc
5281 tgtaacatat tttgcacttt gagaaacctt gtatattaaa ttaccatatg tttttaggtt
5341 tacagaagtt ctaccttagg gaaaagaaag ggaagtaaat tgaaaaaggg gggagaattt
5401 attgtagtgg ctgcctaaaa accactggag tttttaaaag aagcaaggag ttaaatgtcc
5461 tgcaaaacaa ggaagtgagc taagattcat tctagttcac taatgaccag aacttgtcaa
5521 tgagaaacca cttgttaaga aaaagtccag tgtttatttc tcaagagtaa tattcggcca
5581 acagatgtaa ataatagcac tagccactct tattaatatt tatagtgtta gaaaaccagc
5641 cacattacag attcactacg tttgagctca ttgttggtgg ctgctaagag gaaacttaca
5701 ctgcattgga gaggttgtgt acacaggacc tggcctggat gctgattgca ctgtcattgt
5761 atgcaagcat tttgtctttt ttcagaattt ctgactatac ttttggtacg aacaaaattc
5821 atcaccacag ggtcctgttg ttttgtttga tttttagatt tttttaaatt attattaagg
5881 ttgtaatgtt tttctccgag ttgtcagaaa taactggaag aatacaatat atggccatta
5941 tggagccagg ggctagttgg tggtttacta tacatttggg ggctacctgg tcacatttaa
6001 tctaggtttt tttttctttt tttaagtaaa ggtgtggtct cttccctgta cttatgaata
6061 aggacaaagc cctatttttg tttccacata aagatcagct actgaattgg tgaatttcct
6121 gacagacaat gctatctaac catagttcac gttaggggaa gcatttttcc atcagtttct
6181 ttaaaattgg attgtctggt gagttttgat attaaacatt atgtagctaa gttttttttt
6241 ttagcatttc ttttttattt ttcaatctat attcacaggc ccatacttca gtcagtccaa
6301 tcatagtaca gtgatgtggt ggtagatgct atgaatttct tcattgtaaa atacggatca
6361 tttgtatttt ggggtgataa aatagttcac catgggtatg agatatttat tctttaaatc
6421 aaagtaaatt agaattttta aaaagcacaa aactgcagga cagtttatga aataggtggc
6481 actattaggg aatcttcctt taaagcaaga aatcatgtta tttagaaaga aaaactaatc
6541 ttaaacatac tatttctaat aaatatttat atttttatga aataaagagg tatgtggaaa
6601 ttaatatttg gtgatgttgg acagtggaaa agtatctaga gtttttacct gccttatctg
6661 aattcttctt gaaacttgag cttaaactct aatagctgtt tccctttcta ttctgaacaa
6721 ctgtctccat ttttcaagtg tgagagataa gggctaatga tgacatctca tttattttga
6781 gtaaacatta aaattgtttt acaagtctac ttgaaaaaaa aaaaaaaa
//