LOCUS BC148251 998 bp mRNA linear HUM 21-AUG-2007 DEFINITION Homo sapiens SET domain containing 3, mRNA (cDNA clone IMAGE:40115359), complete cds. ACCESSION BC148251 VERSION BC148251.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 998) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 998) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (04-JUL-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 33 Row: i Column: 20 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..998 /db_xref="H-InvDB:HIT000435649" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:40115359" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_282" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: NA" gene 1..998 /gene="SETD3" /db_xref="GeneID:84193" /db_xref="HGNC:HGNC:20493" CDS 22..912 /gene="SETD3" /codon_start=1 /product="SET domain containing 3" /protein_id="AAI48252.1" /db_xref="GeneID:84193" /db_xref="HGNC:HGNC:20493" /translation="MGKKSRVKTQKSGTGATATVSPKEILNLTSELLQKCSSPAPGPG KEWEEYVQIRTLVEKIRKKQKGLSVTFDGKREDYFPDLMKWASENGASVEGFEMVNFK EEGFGLRATRDIKAEELFLWVPRKLLMTVESAKNSVLGPLYSQDRILQAMGNIALAFH LLCERASPNSFWQPYIQTLPSEYDTPLYFEEDEVRYLQSTQAIHDVFSQYKNTARQYA YFYKVIQTHPHANKLPLKDSFTYEDYRWAVSSVMTRQNQIPTEDGSRVTLALIPLWDM CNHTNGLTPEDSFALAVASA" BASE COUNT 284 a 240 c 230 g 244 t ORIGIN 1 gggaagcggg cagtcagaaa aatgggtaag aagagtcgag taaaaactca gaaatctggc 61 actggtgcta cagcaactgt gtcaccaaag gaaatcttga acctgaccag tgagctgctg 121 cagaaatgca gcagtccggc gcctggccca ggaaaagagt gggaagagta tgtgcagatc 181 cggactctgg ttgagaaaat acggaaaaag caaaaaggtc tgtccgttac ttttgatgga 241 aaaagagaag attactttcc tgatctaatg aaatgggcct ctgaaaatgg ggcttctgtc 301 gagggttttg aaatggttaa cttcaaagaa gagggctttg gtttgagagc aacaagagat 361 atcaaggcag aagaattgtt tttatgggtt ccacgaaaat tgctaatgac tgttgaatct 421 gctaaaaatt cagtgttggg gcccttatat tctcaagacc gaatccttca agccatggga 481 aacatcgcac tggcctttca tttgctgtgt gagcgagcca gccctaactc cttctggcag 541 ccctatattc aaaccctccc cagtgaatat gacactcctc tctactttga agaagatgaa 601 gttcggtatc ttcagtccac acaagctata catgatgtct tcagccagta taaaaacaca 661 gctcgacagt acgcctactt ctataaagtc atccagaccc atcctcatgc caacaaacta 721 cccttgaagg attctttcac ttacgaggac tacaggtggg cagtctcttc tgttatgacg 781 aggcaaaacc aaattcccac agaggatggt tcccgcgtga ccctggctct gattccttta 841 tgggatatgt gtaaccacac caacggcctg acaccagaag attccttcgc tcttgctgtc 901 gcctctgcct aagacccccc attccttagg cacttacggg actcactcat agacctcctc 961 cagcgtggct gccctgagca ccctatgtgg agatgaat //