LOCUS BC148185 1276 bp mRNA linear HUM 09-JUN-2008
DEFINITION Homo sapiens ubiquitin-conjugating enzyme E2Q family member 1, mRNA
(cDNA clone IMAGE:40005749), partial cds.
ACCESSION BC148185
VERSION BC148185.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1276)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1276)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (04-JUL-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Sep 28, 2007 this sequence version replaced BC148185.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Baylor Human Genome Sequencing Center
cDNA Library Preparation: Baylor Human Genome Sequencing Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCG Plate: 22 Row: a Column: 4.
FEATURES Location/Qualifiers
source 1..1276
/db_xref="H-InvDB:HIT000435621"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:40005749"
/tissue_type="PCR rescued clones"
/clone_lib="NIH_MGC_282"
/note="Vector: pCR-Blunt II-TOPO; Clone identification
sequence tag: GGTTTTAC sequenced from the reverse primer"
gene <1..1276
/gene="UBE2Q1"
/gene_synonym="GTAP"
/gene_synonym="NICE-5"
/gene_synonym="PRO3094"
/db_xref="GeneID:55585"
/db_xref="HGNC:HGNC:15698"
CDS <1..1037
/gene="UBE2Q1"
/gene_synonym="GTAP"
/gene_synonym="NICE-5"
/gene_synonym="PRO3094"
/codon_start=3
/product="UBE2Q1 protein"
/protein_id="AAI48186.2"
/db_xref="GeneID:55585"
/db_xref="HGNC:HGNC:15698"
/translation="AQAGAGASPGPHLPPRGSVPGDPVRIHCNITESYPAVPPIWSVE
SDDPNLAAVLERLVDIKKGNTLLLQHLKRIISDLCKLYNLPQHPDVEMLDQPLPAEQC
TQEDVSSEDEDEEMPEDTEDLDHYEMKEEEPAEGKKSEDDGIGKENLAILEKIKKNQR
QDYLNGAVSGSVQATDRLMKELRDIYRSQSFKGGNYAVELVNDSLYDWNVKLLKVDQD
SALHNDLQILKEKEGADFILLNFSFKDNFPFDPPFVRVVSPVLSGGYVLGGGAICMEL
LTKQGWSSAYSIESVIMQISATLVKGKARVQFGANKSQYSLTRAQQSYKSLVQIHEKN
GWYTPPKEDG"
BASE COUNT 358 a 326 c 317 g 275 t
ORIGIN
1 gagcgcaggc cggggcgggg gcctcgcccg gaccgcatct ccccccacgg gggtcggtgc
61 ctggggatcc tgtccgcatc cactgcaaca tcacggagtc ataccctgct gtgcccccca
121 tctggtcggt ggagtctgat gaccctaact tggctgctgt cttggagagg ctggtggaca
181 taaagaaagg gaatactctg ctattgcagc atctgaagag gatcatctcc gacctgtgta
241 aactctataa cctccctcag catccagatg tggagatgct ggatcaaccc ttgccagcag
301 agcagtgcac acaggaagac gtgtcttcag aagatgaaga tgaggagatg cctgaggaca
361 cagaagactt agatcactat gaaatgaaag aggaagagcc agctgagggc aagaaatctg
421 aagatgatgg cattggaaaa gaaaacttgg ccatcctaga gaaaattaaa aagaaccaga
481 ggcaagatta cttaaatggt gcagtgtctg gctcggtgca ggccactgac cggctgatga
541 aggagctcag ggatatatac cgatcacaga gtttcaaagg cggaaactat gcagtcgaac
601 tcgtgaatga cagtctgtat gattggaatg tcaaactcct caaagttgac caggacagcg
661 ctttgcacaa cgatctccag atcctcaaag agaaagaagg agccgacttc attctactta
721 acttttcctt taaagataac tttccctttg acccaccatt tgtcagggtt gtgtctccag
781 tcctctctgg agggtatgtt ctgggcggag gggccatctg catggaactt ctcaccaaac
841 agggctggag cagtgcctac tccatagagt cagtgatcat gcagatcagt gccacactgg
901 tgaaggggaa agcacgagtg cagtttggag ccaacaaatc tcaatacagt ctgacaagag
961 cacagcagtc ctacaagtcc ttggtgcaga tccacgaaaa aaacggctgg tacacacccc
1021 caaaagaaga cggctaaccc tggagtatca cccttcctcc ctccccaggc accactggac
1081 caattacctt tgaatgctgt atttggatct cacgctgcct ctgtggttcc ctccctcatt
1141 tttcctggac gtgatagctc tgcctattgc aggacaatga tggctattct aaacgctaag
1201 gaaaaaaaac aaacacagaa ctgtttcaag tactcaagac tgacttacag accaaccaac
1261 caccttgctg gaaccc
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