LOCUS BC146922 1194 bp mRNA linear HUM 12-MAY-2008 DEFINITION Homo sapiens tetraspanin 11, mRNA (cDNA clone MGC:182025 IMAGE:9056850), complete cds. ACCESSION BC146922 VERSION BC146922.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1194) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1194) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (26-JUN-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: LLDM Plate: 684 Row: f Column: 16. FEATURES Location/Qualifiers source 1..1194 /db_xref="H-InvDB:HIT000503179" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:182025 IMAGE:9056850" /tissue_type="Brain, cerebral cortex, PCR rescued clones" /clone_lib="NIH_MGC_286" /note="Vector: pCR4-TOPO; Clone identification sequence tag: ACATACAC" gene 1..1194 /gene="TSPAN11" /db_xref="GeneID:441631" /db_xref="HGNC:HGNC:30795" CDS 60..821 /gene="TSPAN11" /codon_start=1 /product="tetraspanin 11" /protein_id="AAI46923.1" /db_xref="GeneID:441631" /db_xref="HGNC:HGNC:30795" /translation="MAHYKTEQDDWLIIYLKYLLFVFNFFFWVGGAAVLAVGIWTLVE KSGYLSVLASSTFAASAYILIFAGVLVMVTGFLGFGAILWERKGCLSTYFCLLLVIFL VELVAGVLAHVYYQRLSDELKQHLNRTLAENYGQPGATQITASVDRLQQDFKCCGSNS SADWQHSTYILLREAEGRQVPDSCCKTVVARCGQRAHPSNIYKVEGGCLTKLEQFLAD HLLLMGAVGIGVACLQICGMVLTCCLHQRLQRHFY" BASE COUNT 228 a 376 c 348 g 242 t ORIGIN 1 agtggaggag gcaggaatgc ctgggacact cgcggggcat gtgagcaggc ccagaagcca 61 tggcccacta taagactgag caggacgact ggctgatcat ctacttgaag tatttactct 121 ttgtcttcaa cttcttcttc tgggtcgggg gagcagccgt cctggctgtg ggcatctgga 181 ccctggtgga gaagagtggc tacctcagcg tcctggcctc cagcaccttt gccgcctccg 241 cctacatcct catctttgcg ggcgtacttg tcatggtgac cggcttcctg ggcttcggtg 301 ccatcctctg ggagcggaag ggctgcctct ccacgtattt ctgcctgttg ctcgtcatct 361 tcctggttga gctggtggcg ggagtcctgg cccatgtgta ttaccagagg ctgagtgatg 421 aactgaagca gcacttgaac cggactctgg ctgagaacta cgggcagccc ggagccacgc 481 agatcaccgc ctcagtggac cgactccagc aggatttcaa gtgctgcgga agcaacagct 541 cagccgactg gcagcacagc acgtacatcc tgttgcggga ggccgagggc cgccaggtgc 601 ccgacagctg ctgcaagaca gtggtggcgc gctgcggcca gcgggcccac ccctccaaca 661 tctataaggt ggagggaggc tgcctcacca agctggagca gttcctggcc gaccacctgc 721 tgcttatggg ggcagtgggc atcggggtgg cctgcctgca gatctgcggg atggttctca 781 cctgctgctt gcaccagagg ctccagcggc atttttacta atggccaacc acctcctctt 841 ccaactgccc ctcaagacaa catgtggcca catgccatct gcaaggcctg cagagttagc 901 accagctcca ctagggccat agatgccccc tcctttgtgc ctagctcctg cgaatccacc 961 gagtgcctga gaccatagct tctactgtgc ccacccaggc agagaccctc ggccccctct 1021 cctccatttc tgagccccca tggccagatc ctgggcaggg aaatgatcct ttcaggagac 1081 aaccagagcc cctcaccagg aacgggggca cccgtggact acgggagggt ggcggttggg 1141 ttctctgctc cctcccagct cctgaacctg gaacaatcgg cagaaaaccc agga //