LOCUS BC146917 1187 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens tetraspanin 11, mRNA (cDNA clone MGC:182020
IMAGE:9056845), complete cds.
ACCESSION BC146917
VERSION BC146917.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1187)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1187)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 684 Row: f Column: 11.
FEATURES Location/Qualifiers
source 1..1187
/db_xref="H-InvDB:HIT000503174"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:182020 IMAGE:9056845"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_286"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CCCAGGAC"
gene 1..1187
/gene="TSPAN11"
/db_xref="GeneID:441631"
/db_xref="HGNC:HGNC:30795"
CDS 60..821
/gene="TSPAN11"
/codon_start=1
/product="tetraspanin 11"
/protein_id="AAI46918.1"
/db_xref="GeneID:441631"
/db_xref="HGNC:HGNC:30795"
/translation="MAHYKTEQDDWLIIYLKYLLFVFNFFFWVGGAAVLAVGIWTLVE
KSGYLSVLASSTFAASAYILIFAGVLVMVTGFLGFGAILWERKGCLSTYFCLLLVIFL
VELVAGVLAHVYYQRLSDELKQHLNRTLAENYGQPGATQITASVDRLQQDFKCCGSNS
SADWQHSTYILLREAEGRQVPDSCCKTVVARCGQRAHPSNIYKVEGGCLTKLEQFLAD
HLLLMGAVGIGVACLQICGMVLTCCLHQRLQRHFY"
BASE COUNT 226 a 373 c 346 g 242 t
ORIGIN
1 agtggaggag gcaggaatgc ctgggacact cgcggggcat gtgagcaggc ccagaagcca
61 tggcccacta taagactgag caggacgact ggctgatcat ctacttgaag tatttactct
121 ttgtcttcaa cttcttcttc tgggtcgggg gagcagccgt cctggctgtg ggcatctgga
181 ccctggtgga gaagagtggc tacctcagcg tcctggcctc cagcaccttt gccgcctccg
241 cctacatcct catctttgcg ggcgtacttg tcatggtgac cggcttcctg ggcttcggtg
301 ccatcctctg ggagcggaag ggctgcctct ccacgtattt ctgcctgttg ctcgtcatct
361 tcctggttga gctggtggcg ggagtcctgg cccatgtgta ttaccagagg ctgagtgatg
421 aactgaagca gcacttgaac cggactctgg ctgagaacta cgggcagccc ggagccacgc
481 agatcaccgc ctcagtggac cgactccagc aggatttcaa gtgctgcgga agcaacagct
541 cagccgactg gcagcacagc acgtacatcc tgttgcggga ggccgagggc cgccaggtgc
601 ccgacagctg ctgcaagaca gtggtggcgc gctgcggcca gcgggcccac ccctccaaca
661 tctataaggt ggagggaggc tgcctcacca agctggagca gttcctggcc gaccacctgc
721 tgcttatggg ggcagtgggc atcggggtgg cctgcctgca gatctgcggg atggttctca
781 cctgctgctt gcaccagagg ctccagcggc atttttacta atggccaacc acctcctctt
841 ccaactgccc ctcaagacaa catgtggcca catgccatct gcaaggcctg cagagttagc
901 accagctcca ctagggccat agatgccccc tcctttgtgc ctagctcctg cgaatccacc
961 gagtgcctga gaccatagct tctactgtgc ccacccaggc agagaccctc ggccccctct
1021 cctccatttc tgagccccca tggccagatc ctgggcaggg aaatgatcct ttcaggagac
1081 aaccagagcc cctcaccagg aacgggggca cccgtggact acgggagggt ggcggttggg
1141 ttctctgctc cctcccagct cctgaacctg gaacaatcgg cagaaaa
//