LOCUS BC146910 3236 bp mRNA linear HUM 08-JAN-2009
DEFINITION Homo sapiens leucine-rich repeats and transmembrane domains 2, mRNA
(cDNA clone MGC:182013 IMAGE:9056838), complete cds.
ACCESSION BC146910
VERSION BC146910.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3236)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3236)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Ambion
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 18 Row: J Column: 2.
FEATURES Location/Qualifiers
source 1..3236
/db_xref="H-InvDB:HIT000503167"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:182013 IMAGE:9056838"
/tissue_type="Testicle, PCR rescued clones"
/clone_lib="NIH_MGC_382"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TTAATCCT"
gene 1..3236
/gene="LRTM2"
/db_xref="GeneID:654429"
/db_xref="HGNC:HGNC:32443"
CDS 446..1558
/gene="LRTM2"
/codon_start=1
/product="leucine-rich repeats and transmembrane domains
2"
/protein_id="AAI46911.1"
/db_xref="GeneID:654429"
/db_xref="HGNC:HGNC:32443"
/translation="MLAPGSSPGQRGRLALQWRQVSWITCWIALYAVEALPTCPFSCK
CDSRSLEVDCSGLGLTTVPPDVPAATRTLLLLNNKLSALPSWAFANLSSLQRLDLSNN
FLDRLPRSIFGDLTNLTELQLRNNSIRTLDRDLLRHSPLLRHLDLSINGLAQLPPGLF
DGLLALRSLSLRSNRLQNLDRLTFEPLANLQLLQVGDNPWECDCNLREFKHWMEWFSY
RGGRLDQLACTLPKELRGKDMRMVPMEMFNYCSQLEDENSSAGLDIPGPPCTKASPEP
AKPKPGAEPEPEPSTACPQKQRHRPASVRRAMGTVIIAGVVCGVVCIMMVVAAAYGCI
YASLMAKYHRELKKRQPLMGDPEGEHEDQKQISSVA"
BASE COUNT 616 a 1060 c 947 g 613 t
ORIGIN
1 tccacctcct ggtgctgtgt gctgcgtgcc agccgctgct cccgctgagt ggagactctg
61 gcaccagtgc ccactgcgct ctgcctgccg gtggtgtctg gatttctata ggaatcccag
121 gagggtctta ctggagggtt gagagccacc tgattgaagg cgtttgcagt cagagtaaag
181 acggcagctg ccgcagcatg aacccctgag ttgatgagtc ttattatagc ccggctggcg
241 gaagacagag tgctgctatt cacctctgcg tgggcgtcgg tggtgcaggg ggaagcagca
301 ggccatccag cggctcacac cctacgcggc tgcagctgcc aagggcctgg cccctgcctc
361 cctcgggcca tggactgaca ggcggcgcac ccaggggctc ctctctcccc agagcgacag
421 ggcccggaga gccgtgggcc tcaccatgct ggcgccgggc agcagccctg ggcagagggg
481 caggctcgcc ctgcagtgga ggcaagtctc ctggatcacc tgctggatcg ccctgtatgc
541 tgtggaggcc ctccccacct gccctttctc ctgcaagtgt gacagccgca gcctggaggt
601 ggactgcagt ggccttggcc tcaccacggt gcccccagac gtgcccgcag ccacccgaac
661 cctcttgctc ttgaacaata agctgagtgc cctgccaagc tgggctttcg ccaacctctc
721 cagcctgcag cggttggacc tgtccaacaa cttcctggac cggctgcccc gctccatttt
781 cggggacctg acgaatctga ctgagcttca gctgcgcaat aacagcatca ggaccctgga
841 cagggacctg ctgcggcact cgccgctgct ccgccacctg gacctgtcca tcaacggcct
901 ggcccagttg ccccctggtc ttttcgacgg gctcctggct ctgcgctccc tctcgcttcg
961 ctccaaccgt ctgcagaatc tggaccggct gacatttgaa cccctagcaa acctgcagct
1021 gctgcaggtc ggggataacc cctgggagtg tgactgtaac ctgcgtgagt tcaaacactg
1081 gatggagtgg ttctcctacc gagggggacg cttggaccag cttgcctgca ccctgcccaa
1141 ggagctgagg gggaaggaca tgcggatggt ccccatggag atgttcaact actgctccca
1201 gctggaggac gagaatagct cagctgggct ggatattcct gggccaccct gcaccaaggc
1261 cagtccagag cctgctaagc ccaagcccgg ggctgagccg gagccggagc ccagcacagc
1321 ctgcccacag aagcagaggc accggccggc gagcgtgagg cgagccatgg gcacggtgat
1381 cattgcaggg gtcgtgtgcg gcgtcgtctg catcatgatg gtggtggccg ctgcctatgg
1441 ctgcatctac gcctccctca tggccaagta ccaccgggag ctcaaaaagc gccagcccct
1501 gatgggggac cccgagggcg agcacgagga ccagaagcag atctcttctg tggcctgagc
1561 gcccatcccc acccggccag gtaggaaggg cggggagagc acacggcatt gctcagccac
1621 agctcccacc ttgacccggc gctggccact gcctccccga gtccaccctc ctccccgccc
1681 tccagcagac aagccacacc gggttctctc cctgcacttt cgaggctccc tgaaagccac
1741 cgtgctgggg gctcctgctg atgctcctgt ctgggccagt aaatctttgg aacatgtggg
1801 ggatctccct aagctctggc cacagcaaag caaggaggtg tgtgcaagag gaggcttccg
1861 gactgggcat tcccctgtcg cccttcctgc cctggggtgg ccatagctgg tgactcttcc
1921 taccttgctg gtcccacctc acctgcattg aggggacggg gagggaggga tctgagggat
1981 gaaggtagat ttctgagact ctctcctaag ccagaaagac gttcttaaca cccctgcagt
2041 gtgaaagctg gtccagctct acaactgttg gtaccaatgt gcaaacacac cagccctgcc
2101 atctggaccc agcactcaga aacaccatac acccctggcc gacgccatca tgcccctgga
2161 tctgctatag gccacactga ccacatgctc ctggattcgc taattcactc acacacccat
2221 tgcatcacca gtgcggtcac atggattgaa agaattaata cacacacaca cacacacaca
2281 ctcacacggt cacacggaga ccgaggctat gagcgctcga acagcagaga catgctcttc
2341 cccaggggtc tccctgagac cacagagcct ctcgcgtgct cactgcaatc ttctcaagtc
2401 aacagcagga aggaactcaa ccagtaacac caggatcctt tgagatcctc taaagtgggc
2461 caaagtggtg cccctggagg agccctcctg tcaccatggt aaccctctca cacctctcct
2521 gctgggcttt cccgggatac cacccagggg cctggagcgg ctgcatgtgt gcatggcggc
2581 ctcctgagga cccagccaca caccactggt gttgcctcgg tcctgcccac gcatctcaca
2641 gcaccaggcc ctgtggggcc cccactgatt cctccacagc ctgcagcctg gcaccgtgac
2701 tctgtgcctc tcgccctcca tcttcagtac tcctggcctg tgacttcagg gctgggactt
2761 ggtggtgctt tgccattggt ggcaccctct ggggaaagca ggtggcaggc agagaacacg
2821 gtggctcccc tgaggctcat tgcctgccag cttattgcag acagagccca ggagcaggag
2881 cgggtggcca cgtgctgccc agaggctccc aggatggggc ctctgttccc gggctttgtc
2941 tgctcagtgt ggctccctag agcacccagc cggggccaaa ccagagagtg ggtggggagc
3001 ctgtctggga cagagccacc tgctgccaag gcagtgcaag ttttccaggt tacctgtccc
3061 cctccctagc tctgcccctc ctcagagtgt gaagatggtg ggtacctagg tgtcatgctc
3121 acaggctcag gaggcatcgg gctcgtccct ggctctggga tggaatctca atgggggctc
3181 aggaagaggc cagcaagaac cctgaagcca agggtctgag cagagggagt tggcag
//