LOCUS BC146899 3280 bp mRNA linear HUM 12-MAY-2008
DEFINITION Homo sapiens spindlin family, member 3, mRNA (cDNA clone MGC:182002
IMAGE:9056827), complete cds.
ACCESSION BC146899
VERSION BC146899.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3280)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3280)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 684 Row: e Column: 17.
FEATURES Location/Qualifiers
source 1..3280
/db_xref="H-InvDB:HIT000503156"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:182002 IMAGE:9056827"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_287"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: ACCCCTAC"
gene 1..3280
/gene="SPIN3"
/gene_synonym="bA445O16.1"
/db_xref="GeneID:169981"
/db_xref="HGNC:HGNC:27272"
CDS 64..840
/gene="SPIN3"
/gene_synonym="bA445O16.1"
/codon_start=1
/product="spindlin family, member 3"
/protein_id="AAI46900.1"
/db_xref="GeneID:169981"
/db_xref="HGNC:HGNC:27272"
/translation="MKTPFGKAAAGQRSRTGAGHGSVSVTMIKRKAAHKKHRSRPTSQ
PRGNIVGCRIQHGWKDGDEPLTQWKGTVLDQVPVNPSLYLIKYDGFDCVYGLELHRDE
RVSSLEVLPNRVASSRISDTHLAEIMVGKAVEHIFETEEGSKNEWRGMVLAQAPVMNT
WFYITYEKDPVLYMYQLLDDYKDGDLRILQDSNDSPLAEREPGEVIDSLVGKQVEYAK
DDGSKRTGMVIHQVEAKPSVYFIKFDDDFHIYVYDLVKTS"
BASE COUNT 909 a 612 c 779 g 980 t
ORIGIN
1 ccgatttgtg cacttgaggc ccgcaatccg ggacggtggg gaatctgcgc ctcctggccg
61 ggcatgaaga ccccgtttgg aaaggcagct gcagggcagc ggtccaggac gggcgctggc
121 cacggcagtg tgtctgttac catgataaag aggaaggctg cacacaagaa gcataggagc
181 cgacccacct cccagcctcg ggggaacatc gtgggctgca gaattcagca cggatggaaa
241 gatggagatg aacctctaac acagtggaaa ggaaccgttc tggatcaggt acctgtaaat
301 ccctctctgt atcttatcaa atatgatgga tttgactgtg tttatggatt ggaacttcac
361 agagatgaaa gagtgtcatc acttgaagtc cttcctaata gagttgcatc atctagaatc
421 agtgatacac acttggcaga aataatggtt ggcaaagcag tggaacatat ttttgagaca
481 gaggaaggtt ccaaaaatga atggaggggg atggtcttag ctcaggcacc tgtcatgaac
541 acatggtttt acattaccta tgagaaagat cctgtattat atatgtacca gctcttagat
601 gattataaag atggtgacct ccgcatcctt caagattcca atgattctcc tctggcagag
661 agggagccag gagaagtcat agacagcctg gtaggcaaac aggtggaata cgccaaagac
721 gatggctcca agagaactgg catggtcatt catcaggtag aagcaaaacc ctctgtgtac
781 ttcatcaaat ttgatgatga tttccatatc tatgtctacg atttggtaaa aacatcttag
841 aggtcatctt gaaatttgcc aaatatatga gactctaaat ctgtagacac agaaagtctt
901 gattgctttc cagtttgtaa gaaccatctt ctcccttttt gcacgttttg cttggcaaaa
961 aaattggaac ttctgccctc tcatacgttt ttggaagaaa ccttttgccc atctgtccaa
1021 ccttttcact ggttcctctc cgcaatttaa ctgattagtg agaagggtaa agtctgacat
1081 ccattggctc atactttttt ttatcttggg tggtgttaat agattaaagg tagctgaaca
1141 cctctcacct cactcttttt ggcacttgga ctctacactc attgaggtgt gaagcttgct
1201 gagatatccc atgtgactgg ctgggtaagt gtctttgcaa tctcaaatct cccccaagtg
1261 gcttcaaaaa tctaacttgg gaaagagtgg gaagcccatt ttggtctctt gttcaagttg
1321 cattctcaat tctaactgta ctaaaagtaa ggctaataat tttgctctct ttccggttct
1381 ttcacctatt gctcaactgt tttagaatta agaaggtaat tactttgcat tttagtacct
1441 aaccataggc tgagaaacct tgcaaaactg ataagaagac aagcatttgg ggaccaaact
1501 ccaagtggag agatcaagat ttctggtgga gcttaagtga aaggttttag tcctcagtgg
1561 cattagggtc tctcttgtct ccaatagctc tggctggtat ctgcagacat ggagtaggtt
1621 ttaactgata gaagctgtgc aggcagactt tagcacaaat ggtctttgcc agcccagagg
1681 agcattaagc caggctctag ctagagccct cagtcacagg caaaggctgg gtttggctgg
1741 gtttggacag atctgtccag aacctcaaaa tgaaagagga gaaacctaga atcaaactga
1801 gatacagatt tctttgctgt gctaagagag actcaagttt tagatttgat tcttaggaga
1861 ctgaattcag agtcccagca tgtgaggtgg gcaaggcact tgtgagaacc aagaatggct
1921 gaaagcaggc tatacttcct tgcagggact ggtgggctca tctattatgg tatcccagca
1981 ggacttggaa cacagtcagt ggtaggtaat ctgtaggctt aatgatgttt taagtgctgg
2041 cattggtaga tagaaatcta atagattttt gttagtgttt ggatttttaa ctatcctgtt
2101 tcttggctgg ccctaagaaa cttatatgca gataagggtg agttctactg tggcagaaaa
2161 gtaaacaatg gaagggcctt tgagctttcc attattaaag agccattggc ggaggttaac
2221 caaagcctag gaaagaaaag ttgaagtaca agcatggttt ttgagagaag cacctggcca
2281 aaaccaaagc tttctcattg aggttctcac agaagctcca ttagcagtaa cagcctaata
2341 aggccatgga gttctgcaca tttggggctg ggactcaagg cagtacaatc atattgggac
2401 tgtactgcaa gatatcttcc aaattagttt aagttcacag gtcatggagt ccagactacc
2461 ggcacagatt ggcatcctgc tgaggatgaa acaaagaaga tgttctcttt tctcctatgt
2521 tttatctgtc tacttttgct ttttgatgcc actaagtctc tactatgatg tttgactgac
2581 aacagcaatg tgggtctgta ttgccctatg ttctaagtcc tggggtcata tatttgctta
2641 aaaaaactgt tctagtggct ggggactagt gtgctttcta atttttttga tgtgaggttg
2701 atattgtgat aatcttatgt cttcttgacc ctttggactc tttaatatgt atgacatgca
2761 attgtggggt tagattaatt caactcctga ggtcctgaag gaacttcacc cagtcaagag
2821 gaagacagcc aaggctgcag ctgctgaagg aaccccatat ctgggcagac atctttgtga
2881 gatctatatg gctgaaatga gaaaaacgag aaattgggaa aggcagaatt ttggacttta
2941 attattttgg actttgaatt agaaatttaa ttttgggcag tcctttttcc cttggagttt
3001 aatagttgat ggggtggggg tgaggtcata tagttcaaac taaggcattt ttattatgtt
3061 gttgatattg tattatttgg agtattttaa tgctatcttt gggagtcatt gtataattgt
3121 tgtcagctat gtcaggaaat atggctggac ataattgtaa attagggctg caattgtgat
3181 caaattttca gtctagggtg taatgtagcc ttagagttaa tttaattact gttctatttt
3241 gacttatttc agagcctctt gggggcaaaa acaactgctc
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