LOCUS BC146897 893 bp mRNA linear HUM 11-FEB-2009
DEFINITION Homo sapiens cripto, FRL-1, cryptic family 1, mRNA (cDNA clone
MGC:182000 IMAGE:9056825), complete cds.
ACCESSION BC146897
VERSION BC146897.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 893)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 893)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 13 Row: H Column: 11
single stranded.
FEATURES Location/Qualifiers
source 1..893
/db_xref="H-InvDB:HIT000503154"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:182000 IMAGE:9056825"
/tissue_type="Brain, cerebral cortex, PCR rescued clones"
/clone_lib="NIH_MGC_287"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: CCCCACTG"
gene 1..893
/gene="CFC1"
/gene_synonym="CRYPTIC"
/gene_synonym="HTX2"
/db_xref="GeneID:55997"
/db_xref="HGNC:HGNC:18292"
/db_xref="MIM:605194"
CDS 166..837
/gene="CFC1"
/gene_synonym="CRYPTIC"
/gene_synonym="HTX2"
/codon_start=1
/product="cripto, FRL-1, cryptic family 1"
/protein_id="AAI46898.1"
/db_xref="GeneID:55997"
/db_xref="HGNC:HGNC:18292"
/db_xref="MIM:605194"
/translation="MTWRHHVRLLFTVSLALQIINLGNSYQREKHNGGREEVTKVATQ
KHRQSPLNWTSSHFGEVTGSAEGWGPEEPLPYSRAFGEGASARPRCCRNGGTCVLGSF
CVCPAHFTGRYCEHDQRRSECGALEHGAWTLRACHLCRCIFGALHCLPLQTPDRCDPK
DFLASHAHGPSAGGAPSLLLLLPCALLHRLLRPDAPAHPRSLVPSVLQRERRPCGRPG
LGHRL"
BASE COUNT 174 a 285 c 259 g 175 t
ORIGIN
1 tcctggctga ggaagggaag ggaacatcca catcttctgt actcgtccat tctgtgtccc
61 cggggcctgg agtaaagaca ccttcaaatg cagagactct tcagattcag ctttcctgga
121 aactgatctt caatgcacta agagaaggag actctcaaac caaaaatgac ctggaggcac
181 catgtcaggc ttctgtttac ggtcagtttg gcattacaga tcatcaattt gggaaacagc
241 tatcaaagag agaaacataa cggcggtaga gaggaagtca ccaaggttgc cactcagaag
301 caccgacagt caccgctcaa ctggacctcc agtcatttcg gagaggtgac tgggagcgcc
361 gagggctggg ggccggagga gccgctcccc tactcccggg ctttcggaga gggtgcgtcc
421 gcgcggccgc gctgctgcag gaacggcggt acctgcgtgc tgggcagctt ctgcgtgtgc
481 ccggcccact tcaccggccg ctactgcgag catgaccaga ggcgcagtga atgcggcgcc
541 ctggagcacg gagcctggac cctccgcgcc tgccacctct gcaggtgcat cttcggggcc
601 ctgcactgcc tccccctcca gacgcctgac cgctgtgacc cgaaagactt cctggcctcc
661 cacgctcacg ggccgagcgc cgggggcgcg cccagcctgc tactcttgct gccctgcgca
721 ctcctgcacc gcctcctgcg cccggatgcg cccgcgcacc ctcggtccct ggtcccttcc
781 gtcctccagc gggagcggcg cccctgcgga aggccgggac ttgggcatcg cctttaattt
841 tctatgttgt aaataataga tgtgtttagt ttaccgtaag ctgaagcact ggg
//