LOCUS BC146869 2435 bp mRNA linear HUM 11-FEB-2009
DEFINITION Homo sapiens chromosome 10 open reading frame 90, mRNA (cDNA clone
MGC:181972 IMAGE:9056797), complete cds.
ACCESSION BC146869
VERSION BC146869.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2435)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2435)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Ambion
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 684 Row: d Column: 11
single stranded.
FEATURES Location/Qualifiers
source 1..2435
/db_xref="H-InvDB:HIT000503126"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:181972 IMAGE:9056797"
/tissue_type="Testicle, PCR rescued clones"
/clone_lib="NIH_MGC_382"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TCTATTCA"
gene 1..2435
/gene="C10orf90"
/gene_synonym="bA422P15.2"
/gene_synonym="RP11-422P15.2"
/db_xref="GeneID:118611"
/db_xref="HGNC:HGNC:26563"
CDS 109..2208
/gene="C10orf90"
/gene_synonym="bA422P15.2"
/gene_synonym="RP11-422P15.2"
/codon_start=1
/product="chromosome 10 open reading frame 90"
/protein_id="AAI46870.1"
/db_xref="GeneID:118611"
/db_xref="HGNC:HGNC:26563"
/translation="MLKLSGEGLRDSYHSRRDQIALKNLQSDVTEAKSDFTKETLASQ
NTKMISSIVISQMIDENKSRENRASLPLPCAIAQSRAHHAKQSLANRSGVNIHRAFAL
LPGRLGIPAPSDERGPEAELPPKEERPCGGPRRGFASITITARRVGPPARALVWGTAG
DSLCPKCRAEDTLFQAPPALANGAHPGRHQRSFACTEFSRNSSVVRLKVPEAHTGLCE
RRKYWVTHADDKETSFSPDTPLSGKSPLVFSSCVHLRVSQQCPNSIYYVDKSLSVPIE
PPQIASPKMHRSVLSLNLNCSSHRLTADGVDGLVNREPISEALKQELLEGDQDLVGQR
WNPGLQESHLKETPSLRRVHLGTGACPWSGSFPLENTELANVGANQVTVRKGEKDHTT
HCHASDHANQLSIHIPGWSYRAVHTKVFSGSSKRQQGEVCMTVSAPPVEQKPTRHFLP
IGDSSPSDDCLSRDLSEPTERRHQSFLKPRILFPGFLCPLQDVCASLQEDNGVQIESK
FPKGDYTCCDLVVKIKECKKSEDPTTPEPSPAAPSPAPRDGAGSPGLSEDCSESQQTP
ARSLTLQEALEVRKPQFISRSQERLKKLEHMVQQRKAQRKEDLRQKQSLLPIRTSKKQ
FTIPHPLSDNLFKPKERCISEKEMHMRSKRIYDNLPEVKKKKEEQRKRVILQSNRLRA
EVFKKQLLDQLLQRNAV"
BASE COUNT 698 a 643 c 579 g 515 t
ORIGIN
1 ccacagaggt aaactccgga catttttttc tttcatgtag ccaaatacat ccttgtcatt
61 aaaagacctt tgaaactgag taaaatggct ttgaaacctc agtagaatat gctcaaactg
121 tctggagaag gattacggga cagctaccac agtagaagag atcaaattgc ccttaaaaat
181 ctccagtctg atgtcacaga ggcgaaatct gacttcacca aggagaccct ggcatcacaa
241 aacacaaaaa tgatttcatc catagtcatc tcccagatga ttgatgagaa taagtcaaga
301 gaaaacaggg cctccttgcc cctaccgtgt gccattgctc agtctcgtgc acatcacgcc
361 aagcaatctc tggctaaccg cagcggagtc aacattcaca gagcatttgc gttacttccg
421 ggcagattag gaatcccggc accgtcagat gagcgaggac ctgaggcaga gctgccgccc
481 aaagaggaga gaccctgtgg gggcccccgc agagggtttg catccatcac catcacggcc
541 agacgcgtgg gccccccagc ccgcgccctg gtgtggggga ctgctgggga ctctctgtgc
601 cccaagtgca gggctgagga cacactgttc caggcgcccc cggctctggc caatggcgcc
661 catccaggtc ggcatcagag atcttttgcc tgcacagagt tctccagaaa cagctccgtg
721 gtgcggctga aggttcccga ggcccacact gggttgtgtg agagacgcaa gtactgggtc
781 acccatgcag acgacaaaga gaccagtttt tctccagaca ccccactgtc aggaaagagc
841 ccgctggtgt tcagttcctg tgtccacctc agggtgtctc agcagtgtcc aaattcaatc
901 tattacgtag acaagtctct ctccgtcccc attgagccac ctcaaattgc cagccccaaa
961 atgcacagat ccgtcctgtc gctcaacctc aattgtagtt cccacagatt aacagcagat
1021 ggagtagatg gcctagtgaa cagagagcca ataagcgaag ccctgaagca ggagctcctg
1081 gagggagacc aggacctcgt aggccagcgc tggaacccag gtttacaaga aagtcacttg
1141 aaggaaaccc catcgttgag gcgggtgcat ttggggaccg gcgcttgtcc ttggagtggt
1201 tcttttccat tggaaaacac agaattggca aatgtgggag ctaaccaagt cactgtaaga
1261 aaaggggaaa aggaccatac aactcattgt cacgccagcg atcatgccaa ccaactgtcc
1321 attcacattc ctggctggag ttacagggca gtacacacaa aagtattttc tggaagcagc
1381 aagaggcaac aaggagaagt atgtatgact gtgtctgctc ctccagtgga acagaagccc
1441 actagacatt tccttcccat tggggatagc tctccaagcg atgactgtct gtctagagac
1501 ctttctgagc ccacagagag acgacatcaa agcttcctga aacccagaat cctttttcct
1561 gggtttcttt gccccttaca agatgtatgt gcatctctgc aggaagacaa tggtgttcag
1621 atagaaagca agttccccaa aggagattac acatgctgtg acttggttgt aaaaataaag
1681 gaatgtaaga agagtgagga ccccaccaca cctgagccct ccccagcagc accctcgcca
1741 gcaccccgcg atggagcagg gagccctggc ctgtccgaag actgttctga gtctcagcaa
1801 acgcctgcaa gatctttgac cttgcaagaa gcactggaag ttcgtaagcc tcagttcatt
1861 tctcgctcac aagaacggct gaagaagctt gaacacatgg tccagcagag gaaagcccag
1921 cggaaggagg acctgaggca gaagcagagc ctccttccca tccgcaccag caagaagcag
1981 ttcacgattc cccatcctct gagtgataac ttgttcaaac ccaaagaacg gtgcatttca
2041 gagaaggaga tgcatatgcg atctaagaga atctatgata acttgccgga agttaaaaag
2101 aaaaaagaag aacaaaggaa aagggtgatc ttacaaagta acagactccg tgccgaagtc
2161 ttcaaaaagc aattactgga ccagctcctt caaaggaatg cggtctaacc acaggctgcc
2221 ctgctgacca cactacctgg acctgggagg acttcgaatg ctggataagc cattaaactt
2281 agcattatct tcatcatggg aaaacactta ttttactttc gatttttttt ttccataaag
2341 gaaaacatca cttcctgaat tactgaccca agccaaacag aaacaataac cctcgagaaa
2401 ataggtcaac aatctgttgt ggggaaacca cctcc
//