LOCUS BC146838 4441 bp mRNA linear HUM 11-FEB-2009
DEFINITION Homo sapiens mannose receptor, C type 1-like 1, mRNA (cDNA clone
MGC:181940 IMAGE:9056765), complete cds.
ACCESSION BC146838
VERSION BC146838.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4441)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4441)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (26-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 13 Row: I Column: 5
single stranded.
FEATURES Location/Qualifiers
source 1..4441
/db_xref="H-InvDB:HIT000503098_02"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:181940 IMAGE:9056765"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_364"
/lab_host="DH10B"
/note="Vector: pCR-XL-TOPO with reversed insert; Clone
identification sequence tag: TTGACATT"
gene 1..4441
/gene="MRC1L1"
/gene_synonym="bA541I19.1"
/gene_synonym="CLEC13DL"
/db_xref="GeneID:414308"
/db_xref="HGNC:HGNC:23403"
CDS 47..4417
/gene="MRC1L1"
/gene_synonym="bA541I19.1"
/gene_synonym="CLEC13DL"
/codon_start=1
/product="mannose receptor, C type 1-like 1"
/protein_id="AAI46839.1"
/db_xref="GeneID:414308"
/db_xref="HGNC:HGNC:23403"
/translation="MRLPLLLVFASVIPGAVLLLDTRQFLIYNEDHKRCVDAVSPSAV
QTAACNQDAESQKFRWVSESQIMSVAFKLCLGVPSKTDWVAITLYACDSKSEFQKWEC
KNDTLLGIKGEDLFFNYGNRQEKNIMLYKGSGLWSRWKIYGTTDNLCSRGYEAMYTLL
GNANGATCAFPFKFENKWYADCTSAGRSDGWLWCGTTTDYDTDKLFGYCPLKFEGSES
LWNKDPLTSVSYQINSKSALTWHQARRSCQQQNAELLSITEIHEQTYLTGLTSSLTSG
LWIGLNSLSFNSGWQWSDRSPFRYLNWLPGSPSAEPGKSCVSLNPGKNAKWENLECVQ
KLGYICKKGNTTLNSFVIPSESDVPTHCPSQWWPYAGHCYKIHRDEKKIQRDALTTCR
KEGGDLASIHTIEEFDFIISQLGYEPNDELWIGLNDIKIQMYFEWSDGTPVTFTKWLR
GEPSHENNRQEDCVVMKGKDGYWADRGCEWPLGYICKMKSRSQGPEIVEVEKGCRKGW
KKHHFYCYMIGHTLSTFAEANQTCNNENAYLTTIEDRYEQAFLTSFVGLRPEKYFWTG
LSDIQTKGTFQWTIEEEVRFTHWNSDMPGRKPGCVAMRTGIAGGLWDVLKCDEKAKFV
CKHWAEGVTHPPKPTTTPEPKCPEDWGASSRTSLCFKLYAKGKHEKKTWFESRDFCRA
LGGDLASINNKEEQQTIWRLITASGSYHKLFWLGLTYGSPSEGFTWSDGSPVSYENWA
YGEPNNYQNVEYCGELKGDPTMSWNDINCEHLNNWICQIQKGQTPKPEPTPAPQDNPP
VTEDGWVIYKDYQYYFSKEKETMDNARAFCKRNFGDLVSIQSESEKKFLWKYVNRNDA
QSAYFIGLLISLDKKFAWMDGSKVDYVSWATGEPNFANEDENCVTMYSNSGFWNDINC
GYPNAFICQRHNSSINATTVMPTMPSVPSGCKEGWNFYSNKCFKIFGFMEEERKNWQE
ARKACIGFGGNLVSIQNEKEQAFLTYHMKDSTFSAWTGLNDVNSEHTFLWTDGRGVHY
TNWGKGYPGGRRSSLSYEDADCVVIIGGASNEAGKWMDDTCDSKRGYICQTRSDPSLT
NPPATIQTDGFVKYGKSSYSLMRQKFQWHEAETYCKLHNSLIASILDPYSNAFAWLQM
ETSNERVWIALNSNLTDNQYTWTDKWRVRYTNWAADEPKLKSACVYLDLDGYWKTAHC
NESFYFLCKRSDEIPATEPPQLPGRCPESDHTAWIPFHGHCYYIESSYTRNWGQASLE
CLRMGSSLVSIESAAESSFLSYRVEPLKSKTNFWIGLFRNVEGTWLWINNSPVSFVNW
NTGDPSGERNDCVALHASSGFWSNIHCSSYKGYICKRPKIIDAKPTHELLTTKADTRK
MDPSKPSSNVAGVVIIVILLILTGAGLAAYFFYKKRHVHLPQEGAFENTLYFNSQSSP
GTSDMKDLVGNIEQNEHSVI"
BASE COUNT 1359 a 893 c 1058 g 1131 t
ORIGIN
1 tccgccctcc tgtccatcag gagaaggaaa ggataaaccc tgggccatga ggctacccct
61 gctcctggtt tttgcctctg tcattccggg tgctgttctc ctactggaca ccaggcaatt
121 tttaatctat aatgaagatc acaagcgctg cgtggatgca gtgagtccca gtgccgtcca
181 aaccgcagct tgcaaccagg atgccgaatc acagaaattc cgatgggtgt ccgaatctca
241 gattatgagt gttgcattta aattatgcct gggagtgcca tcaaaaacag actgggttgc
301 tatcactctc tatgcctgtg actcaaaaag tgaatttcag aaatgggagt gcaaaaatga
361 cacacttttg gggatcaaag gagaagattt attttttaac tacggcaaca gacaagaaaa
421 gaatattatg ctctacaagg gatcgggttt atggagcagg tggaagatct atggaaccac
481 agacaatctg tgctccagag gttatgaagc catgtatacg ctactaggca atgccaatgg
541 agcaacctgt gcattcccgt tcaagtttga aaacaagtgg tacgcagatt gcacgagtgc
601 tgggcggtcg gatggatggc tctggtgcgg aaccactact gactatgaca cagacaagct
661 atttggatat tgtccattga aatttgaggg cagtgaaagc ttatggaata aagacccgct
721 gaccagcgtt tcctaccaga taaactccaa atccgcttta acgtggcacc aagcgaggag
781 aagctgccaa caacagaacg ctgagctcct gagcatcaca gagatacatg agcaaacata
841 cctgacagga ttaaccagtt ccttgacctc aggactctgg attggactta acagtctgag
901 cttcaacagc ggttggcagt ggagtgaccg cagtcctttc cgatatttga actggttacc
961 aggaagtcca tcagctgaac ctggaaaaag ctgtgtgtca ctaaatcctg gaaaaaatgc
1021 taaatgggaa aatctggaat gtgttcagaa actgggctat atttgcaaaa agggcaacac
1081 cactttaaat tcttttgtta ttccctcaga aagtgatgtg cctactcact gtcctagtca
1141 gtggtggccg tatgccggtc actgttacaa gattcacaga gatgagaaaa aaatccagag
1201 ggatgctctg accacctgca ggaaggaagg cggtgacctc gcaagtatcc acaccattga
1261 ggaattcgac tttattatct cccagctagg atatgagcca aatgacgaat tgtggatcgg
1321 cttaaatgac attaagattc aaatgtactt tgagtggagt gatgggaccc ctgtaacgtt
1381 taccaaatgg cttcgtggag aaccaagcca tgaaaacaac agacaggagg attgtgtggt
1441 gatgaaaggc aaggatgggt actgggcaga tcggggctgt gagtggcctc ttggctacat
1501 ctgcaagatg aaatcacgaa gccaaggtcc agaaatagtg gaagtcgaaa aaggctgcag
1561 gaaaggctgg aaaaaacatc acttttactg ctatatgatt ggacatacgc tttcaacatt
1621 tgcagaagca aaccaaacct gtaataatga gaatgcttat ttaacaacta ttgaagacag
1681 atatgaacaa gccttcctga ctagtttcgt tggcttaagg cctgaaaaat atttctggac
1741 aggactttca gatatacaaa ccaaagggac ttttcagtgg accatcgagg aagaggttcg
1801 gttcacccac tggaattcag atatgccagg gcgaaagcca gggtgtgttg ccatgagaac
1861 cgggattgca gggggcttat gggatgtttt gaaatgtgat gaaaaggcaa aatttgtgtg
1921 caagcactgg gcagaaggag taacccaccc accgaagccc acgacgactc ccgaacccaa
1981 atgtccggag gattggggcg ccagcagtag aacaagcttg tgtttcaagc tgtatgcaaa
2041 aggaaaacat gagaagaaaa cgtggtttga atctcgagat ttttgtcgag ctctgggtgg
2101 agacttagct agcatcaata acaaagagga acagcaaaca atatggcgat taataacagc
2161 tagtggaagc taccacaaac tgttttggtt gggattgaca tatggaagcc cttcagaagg
2221 ttttacctgg agtgatggtt ctcctgtttc atatgaaaac tgggcttatg gagaacctaa
2281 taattatcaa aatgttgaat actgtggtga gctgaaaggt gaccctacta tgtcttggaa
2341 tgatattaat tgtgaacacc ttaacaactg gatttgccag atacaaaaag gacaaacacc
2401 aaaacctgag ccaacaccag ctcctcaaga caatccacca gttactgaag atgggtgggt
2461 tatttacaaa gactaccagt attatttcag caaagagaag gaaaccatgg acaatgcgcg
2521 agcgttttgc aagaggaatt ttggtgatct tgtttctatt caaagtgaaa gtgaaaagaa
2581 gtttctatgg aaatatgtaa acagaaatga tgcacagtct gcatatttta ttggtttatt
2641 gatcagcttg gataaaaagt ttgcttggat ggatggaagc aaagtggatt acgtgtcttg
2701 ggccacaggt gaacccaatt ttgcaaatga agatgaaaac tgtgtgacca tgtattcaaa
2761 ttcagggttt tggaatgaca ttaactgtgg ctatccaaac gccttcattt gccagcgaca
2821 taacagtagt atcaatgcta ccacagttat gcctaccatg ccctcggtcc catcagggtg
2881 caaggaaggt tggaatttct acagcaacaa gtgtttcaaa atctttggat ttatggaaga
2941 agaaagaaaa aattggcaag aggcacgaaa agcttgtata ggctttggag ggaatctggt
3001 ctccatacaa aatgaaaaag agcaagcatt tcttacctat cacatgaagg actccacttt
3061 cagtgcctgg actgggctga atgatgtcaa ttcagaacac acgttccttt ggacggatgg
3121 acgaggagtc cattacacaa actgggggaa aggttaccct ggtggaagaa gaagcagtct
3181 ttcttatgaa gatgctgact gtgttgttat tattggaggt gcatcaaatg aagcaggaaa
3241 atggatggat gatacctgcg acagtaaacg aggctacata tgccagacac gatccgaccc
3301 ttccttgact aatcctccag caacgattca aacagatggc tttgttaaat atggcaaaag
3361 cagctattca ctcatgagac aaaaatttca atggcatgaa gcggagacat actgcaagct
3421 tcacaattcc cttatagcca gcattctgga tccctacagt aatgcatttg cgtggctgca
3481 gatggaaaca tctaatgaac gtgtgtggat cgccctgaac agtaacttga ctgataatca
3541 atacacttgg actgataagt ggagggtgag gtacactaac tgggctgctg atgagcccaa
3601 attgaaatca gcatgtgttt atctggatct tgatggctac tggaagacag cacattgcaa
3661 tgaaagtttt tactttctct gtaaaagatc agatgaaatc cctgctactg aacccccaca
3721 actgcctggc agatgcccgg agtcagatca cacagcatgg attcctttcc atggtcactg
3781 ttactatatt gagtcctcat atacaagaaa ctggggccaa gcttctctgg aatgtcttcg
3841 aatgggttcc tctctggttt ccattgaaag tgctgcagaa tccagttttc tgtcatatcg
3901 ggttgagcca cttaaaagta aaaccaattt ttggatagga ttgttcagaa atgttgaagg
3961 gacgtggctg tggataaata acagtccggt ctcctttgtc aactggaaca caggagatcc
4021 ctctggtgaa cggaatgatt gtgtagcttt acatgcgtct tctgggtttt ggagtaatat
4081 tcactgttct tcctacaaag gatatatttg taaaagacca aaaattattg atgctaaacc
4141 tactcatgaa ttacttacaa caaaagctga cacaaggaag atggaccctt ctaaaccgtc
4201 ttccaacgtg gccggagtag tcatcattgt gatcctcctg attttaacgg gtgctggcct
4261 tgccgcctat ttcttttata agaaaagaca tgtgcaccta cctcaagagg gcgcctttga
4321 aaacactctg tattttaaca gtcagtcaag cccaggaact agtgatatga aagatctcgt
4381 gggcaatatt gaacagaatg aacactcggt catctagtac ctcaatgcga ttctgagata
4441 t
//