LOCUS BC146816 2789 bp mRNA linear HUM 13-JUL-2007
DEFINITION Homo sapiens glutamate receptor, ionotrophic, AMPA 4, mRNA (cDNA
clone IMAGE:8860412), complete cds.
ACCESSION BC146816
VERSION BC146816.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2789)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2789)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: RIKEN
cDNA Library Preparation: RIKEN
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCF Plate: 13 Row: e Column: 2
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..2789
/db_xref="H-InvDB:HIT000435608"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:8860412"
/tissue_type="Clones donated by RIKEN"
/clone_lib="NIH_MGC_424"
/lab_host="DH10B"
/note="Vector: pFLC1"
gene 1..2789
/gene="GRIA4"
/gene_synonym="GLUR4C"
/gene_synonym="GLURD"
/db_xref="GeneID:2893"
/db_xref="HGNC:HGNC:4574"
/db_xref="MIM:138246"
CDS 274..1575
/gene="GRIA4"
/gene_synonym="GLUR4C"
/gene_synonym="GLURD"
/codon_start=1
/product="GRIA4 protein"
/protein_id="AAI46817.1"
/db_xref="GeneID:2893"
/db_xref="HGNC:HGNC:4574"
/db_xref="MIM:138246"
/translation="MRIISRQIVLLFSGFWGLAMGAFPSSVQIGGLFIRNTDQEYTAF
RLAIFLHNTSPNASEAPFNLVPHVDNIETANSFAVTNAFCSQYSRGVFTIFGLYDKRS
VHTLTSFCSALHISLITPSFPTEGESQFVLQLRPSLRGALLSLLDHYEWNCFVFLYDT
DRGYSILQAIMEKAGQNGWHVSAICVENFNDVSYRQLLEELDIRQEKKFVIDCEIERL
QNILEQIVSVGKHVKGYHYIIANLGFKDISLERFIHGGANVTGFQLVDFNTPMVIKLM
DRWKKLDQREYPGSETPPKYTSALTYDGVLVMAETFRSLRRQKIDISRRGNAGDCLAN
PAAPWGQGIDMERTLKQVRIQGLTGNVQFDHYGRRVNYTMDVFELKSTGPRKVGYWND
MDKLVLIQDVPTLGNDTAAIENRTVVVTTIMPLMKNPILRN"
BASE COUNT 873 a 477 c 554 g 885 t
ORIGIN
1 atttacagcc ggacagaaaa cctctcccag ggctatggag actgcgggaa aaatctggcg
61 gctcgcgatg gattgctaag gagaactagt cataatctta aaccaccgaa acctctttcc
121 ttttttttct ttcttttctt tcttttcttt tttttttttt tttttggttg attttaattt
181 tagcgccatc gtcttcaatg cttctctgaa cagcctttag gaagagtgcg agagaaagag
241 agagagcgcg cgccagggag aggagaaaag aagatgagga ttatttccag acagattgtc
301 ttgttatttt ctggattttg gggactcgcc atgggagcct ttccgagcag cgtgcaaata
361 ggtggtctct tcatccgaaa cacagatcag gaatacactg cttttcgatt agcaattttt
421 cttcataaca ccagccccaa tgcgtcggaa gctcctttta atttggtacc tcatgtggac
481 aacattgaga cagccaacag ttttgctgta acaaacgcct tctgttccca gtattctaga
541 ggagtattta ccatttttgg actctatgat aagaggtcgg tacatacctt gacctcattc
601 tgcagcgcct tacatatctc cctcatcaca ccaagtttcc ctactgaggg ggagagccag
661 tttgtgctgc aactaagacc ttcgttacga ggagcactct tgagtttgct ggatcactac
721 gaatggaact gttttgtctt cctgtatgac acagacaggg gatactcgat actccaagct
781 attatggaaa aagcaggaca aaatggttgg catgtcagcg ctatatgtgt ggaaaatttt
841 aatgatgtca gctataggca acttctagaa gaacttgaca taagacaaga gaagaagttt
901 gtaatagact gtgagataga gagacttcaa aacatattag aacagattgt aagtgttgga
961 aagcatgtta aaggctacca ttatatcatt gcaaacttgg gattcaagga tatttctctt
1021 gagaggttta tacatggtgg agccaatgtt actggattcc agttggtgga ttttaataca
1081 cctatggtaa tcaaactaat ggatcgctgg aagaaactag atcagagaga gtatccagga
1141 tctgagactc ctccaaagta cacctctgct ctgacttatg atggagtcct tgtgatggct
1201 gaaactttcc gaagtcttag gaggcagaaa attgatatct caaggagagg aaatgctggg
1261 gattgtctgg caaatcctgc tgctccatgg ggccagggaa ttgacatgga gaggacactc
1321 aaacaggttc gaattcaagg gctgacaggg aatgttcagt ttgaccacta tggacgtaga
1381 gtcaattaca caatggatgt gtttgagctg aaaagcacag gacctagaaa ggttggttac
1441 tggaatgata tggataagtt agtcttgatt caagatgtac caactcttgg caatgacaca
1501 gctgctattg agaacagaac agtggttgta accacaatta tgcctctgat gaagaatcct
1561 attttaagaa attgatcaag aaagaaaaga gttctgcact gttcgaccat tcctaactaa
1621 ggctcaagtc ttgttctcca gtgtagtaaa tttaagctta tttttcatgt gggattcttc
1681 ttggatgacc aactctggac taccagaaaa aaaaaatttt aagttctgtg acttttctga
1741 gatattagaa caaaagaaga attaatcttc atctttctca agaaatagat gttgacaaag
1801 aatcacttag cgattctgac atatcaattc ccctatcttg aaatgaggtc actgtatgta
1861 aatgatggaa ttatatcact ccatttccaa gggtagattt tctataagta aatatctcgg
1921 aatttgtgtg cttgttttct gaatatatac agttgttttc tttaaagatc tcttggaatt
1981 ttgcctgttc tgtgtgaaat aaagtgtttt aatgtgcatt ataggtatga tatagagaat
2041 ctcctttcca tccttgttac taaagggact tgacaaataa atcttaaaac caaaatactg
2101 aattaatttt gcaagcatgg ctagttttta ggaagcatgc tatcaaaaaa aaaaagacta
2161 aaaatggctg aaaaaatcca actgttttat atatatataa atatatatat atttatatat
2221 atataaagga tattctgtaa agttatatgt tgtttgacag taaagccatc aatatttttg
2281 ctatcaaaat agtataatac tagtatcttt ttgtatgaaa atgtaatctt tatataaata
2341 atacctctga tatttgcaac tgcataatcg ttcagtaatt caaaaagaca tactagaatc
2401 ctttttctga aagtgttcct tcaatttgct tttgttgaaa acggtagtcc aggacctatg
2461 atatccctcc acttcattca ttatgaaaga aatcccttgt agataaacaa gatattggca
2521 tctgcatgta attatcccca gattcagctg aaaactccca acacagatgg aattggctag
2581 acattttaat atatgtgata cctatatcta gatatagaag gctgagagtg agcactggat
2641 ataattcatt ttgattgaaa ttgatatggt gttattgttc ttccagttgt ctgtcctttg
2701 tgtatgttct tatttatatg ttgatacact gtaacactat atgctattgc taaataaaat
2761 tgattgagaa atccaaaaaa aaaaaaaaa
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