LOCUS BC146809 3732 bp mRNA linear HUM 23-JUL-2007
DEFINITION Homo sapiens RAB3 GTPase activating protein subunit 1 (catalytic),
mRNA (cDNA clone MGC:167035 IMAGE:8860368), complete cds.
ACCESSION BC146809
VERSION BC146809.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3732)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3732)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: RIKEN
cDNA Library Preparation: RIKEN
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCF Plate: 12 Row: d Column: 7.
FEATURES Location/Qualifiers
source 1..3732
/db_xref="H-InvDB:HIT000435601"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:167035 IMAGE:8860368"
/tissue_type="Clones donated by RIKEN"
/clone_lib="NIH_MGC_424"
/lab_host="DH10B"
/note="Vector: pFLC1"
gene 1..3732
/gene="RAB3GAP1"
/gene_synonym="P130"
/gene_synonym="RAB3GAP"
/gene_synonym="RAB3GAP130"
/gene_synonym="WARBM1"
/db_xref="GeneID:22930"
/db_xref="HGNC:HGNC:17063"
/db_xref="MIM:602536"
CDS 413..3220
/gene="RAB3GAP1"
/gene_synonym="P130"
/gene_synonym="RAB3GAP"
/gene_synonym="RAB3GAP130"
/gene_synonym="WARBM1"
/codon_start=1
/product="RAB3GAP1 protein"
/protein_id="AAI46810.1"
/db_xref="GeneID:22930"
/db_xref="HGNC:HGNC:17063"
/db_xref="MIM:602536"
/translation="MFSLISGIFTSGTWEEKSDEISFADFKFSVTHHYLVQESTDKEG
KDELLEDVVPQSMQDLLGMNNDFPPRAHCLVRWYGLREFVVIAPAAHSDAVLSESKCN
LLLSSVSIALGNTGCQVPLFVQIHHKWRRMYVGECQGPGVRTDFEMVHLRKVPNQYTH
LSGLLDIFKSKIGCPLTPLPPVSIAIRFTYVLQDWQQYFWPQQPPDIDALVGGEVGGL
EFGKLPFGACEDPISELHLATTWPHLTEGIIVDNDVYSDLDPIQAPHWSVRVRKAENP
QCLLGDFVTEFFKICRRKESTDEILGRSAFEEEGKETADITHALSKLTEPASVPIHKL
SVSNMVHTAKKKIRKHRGVEESPLNNDVLNTILLFLFPDAVSEKPLDGTTSTDNNNPP
SESEDYNLYNQFKSAPSDSLTYKLALCLCMINFYHGGLKGVAHLWQEFVLEMRFRWEN
NFLIPGLASGPPDLRCCLLHQKLQMLNCCIERKKARDEGKKTSASDVTNIYPGDAGKA
GDQLVPDNLKETDKEKGEVGKSWDSWSDSEEEFFECLSDTEELKGNGQESGKKGGPKE
MANLRPEGRLYQHGKLTLLHNGEPLYIPVTQEPAPMTEDLLEEQSEVLAKLGTSAEGA
HLRARMQSACLLSDMESFKAANPGCSLEDFVRWYSPRDYIEEEVIDEKGNVVLKGELS
ARMKIPSNMWVEAWETAKPIPARRQRRLFDDTREAEKVLHYLAIQKPADLARHLLPCV
IHAAVLKVKEEESLENISSVKKIIKQIISHSSKVLHFPNPEDKKLEEIIHQITNVEAL
IARARSLKAKFGTEKCEQEEEKEDLERFVSCLLEQPEVLVTGAGRGHAGRIIHKLFVN
AQRAAAMTPPEEELKRMGSPEERRQNSVSDFPPPAGREFILRTTVPRPAPYSKALPQR
MYSVLTKEDFRLAVKIIDGDV"
BASE COUNT 1140 a 748 c 895 g 949 t
ORIGIN
1 ggcgctcctc aagatggctg ccgacagtga gcccgaatcc gaggtatttg agatcacgga
61 cttcaccact gcctcggaat gggaaaggtt tatttccaaa gttgaagaag tcttgaatga
121 ctggaaactg attggaaact ctttgggaaa gccactcgaa aagaacaact tttaacagtt
181 ccatgtgtgc acattatacc ttgaaaaaaa gtgttcacaa cagcgaagac ttgaaaccaa
241 cccaaatgtc catcaatgac agactggatt aagaaaatgt ggcacatata aaccatggaa
301 tactatgcag ccataaaaaa ggatgagttc atgtcctttg tagggacatg gatgaagctg
361 gaaaccatca ttctcagcac tcttaacacg ggaacagaaa accaaatgct gcatgttctc
421 actcataagt ggtatattta cttctggcac atgggaagag aaatcagatg aaatttcctt
481 tgctgacttc aagttctcag tcactcatca ttatcttgta caagagtcca ctgataaaga
541 aggaaaggat gagttattag aggatgttgt tccacaatct atgcaagatt tgctgggtat
601 gaataatgac tttcctccaa gagcacattg cctggtaaga tggtatgggc tacgtgagtt
661 cgtggtgatt gcccctgctg cacacagtga cgctgttctc agcgaatcta agtgcaacct
721 tcttctgagt tctgtttcta ttgccttggg aaacactggc tgtcaggtgc cactctttgt
781 gcaaattcac cacaaatggc gaagaatgta tgtaggagaa tgtcaaggtc ctggtgtacg
841 aactgatttc gaaatggttc atcttagaaa agtgccaaat cagtacactc acttatcagg
901 tctgctggat atcttcaaat caaagattgg atgtccttta actccattgc ctccagttag
961 tattgctatt cgatttacct atgtacttca agattggcag cagtattttt ggcctcagca
1021 acctccagac atagatgccc ttgtaggagg agaagttgga ggcttggagt ttggcaagtt
1081 accatttggt gcctgcgaag atcctattag tgaactccat ttagctacta catggcctca
1141 tctgaccgaa gggatcattg tggataatga tgtttattct gatttggatc ctattcaagc
1201 tccacattgg tctgttagag ttcgaaaagc tgagaatcct cagtgtttgc taggtgattt
1261 tgtcactgaa ttttttaaaa tttgccgtcg aaaggagtca actgatgaga ttcttggacg
1321 atctgcattt gaggaagaag gcaaagaaac tgctgatata actcatgctt tgtcaaaatt
1381 gacagagccg gcatcagttc caattcataa attatcagtt tcaaatatgg tacacactgc
1441 aaagaagaaa atccgaaaac acagaggtgt agaggagtca ccgctaaata atgatgttct
1501 taatactatt ctcctgttct tattccctga tgctgtttct gagaaaccat tagatggaac
1561 tacttcaaca gataataata atcctccatc agagagtgaa gactataatc tctacaatca
1621 gttcaagtct gcaccatctg acagtttaac atacaaactg gctttgtgtc tctgtatgat
1681 caatttttac catggagggt tgaaaggagt ggcacacctc tggcaggaat ttgttcttga
1741 aatgcgtttc cgatgggaaa acaactttct gattccagga ttagcaagtg gacccccaga
1801 tctgaggtgt tgtttactgc atcagaaact acagatgtta aattgttgta ttgaaagaaa
1861 gaaggcacgt gatgagggga aaaagacaag tgcttcagat gtcactaata tatatccagg
1921 ggatgctgga aaagcaggag accagttggt gccagataat ctaaaagaaa cagataagga
1981 aaagggagag gtaggaaaat cttgggattc ctggagtgac agcgaagaag aattttttga
2041 atgcctaagt gatactgaag aacttaaagg aaatggacaa gagagtggca agaaaggagg
2101 acctaaggag atggcaaatt taaggccgga aggacggctg tatcagcatg ggaaacttac
2161 actgctgcat aatggagaac ctctctacat tccagtaacc caggaaccag cacctatgac
2221 agaagatctg ctagaagagc agtctgaagt tttagctaaa ttaggtacat cggcagaggg
2281 ggctcacctt cgagcacgca tgcagagtgc ctgtctgctc tcagatatgg agtcctttaa
2341 ggcagctaat ccaggttgct ccctggaaga ttttgtgagg tggtattcac cccgggatta
2401 tattgaagag gaggtgattg atgaaaaggg caatgtggtg ctgaaaggag aactgagtgc
2461 ccggatgaag attccaagca atatgtgggt agaagcctgg gaaacagcta agccaattcc
2521 tgctagaagg caaaggagac tctttgatga tacacgggaa gcagaaaagg tgctgcacta
2581 tctggcaatc cagaaacctg cagaccttgc tcggcacctg ttaccttgtg tgattcatgc
2641 agctgtactc aaggtaaagg aagaagaaag tctcgaaaac atttcttcag ttaagaagat
2701 cataaagcag ataatatccc attccagtaa agttttgcac ttccccaatc cagaagacaa
2761 gaaattggaa gaaatcattc accagattac taatgtggaa gctctcattg ccagagctcg
2821 gtcactaaaa gccaagtttg gaactgagaa atgtgaacag gaggaggaaa aggaagatct
2881 tgaaaggttt gtgagttgcc tgctggagca gcctgaagtg ttagtcaccg gtgcaggaag
2941 aggacatgct ggcaggatca ttcacaagct gtttgtgaat gcccagaggg ctgcagctat
3001 gactccacca gaggaggaat tgaagagaat gggctcccca gaggaaagaa ggcagaactc
3061 cgtgtcagac ttcccacccc ctgctggccg ggaattcatt ttgcgcacca ctgtgccgcg
3121 ccctgctccc tactccaaag ctctgcctca gcggatgtac agtgttctca ccaaagagga
3181 ctttagactt gcagttaaaa taatcgatgg ggatgtgtag cccccccgtg tgaggatgac
3241 atcaccacat ttctagtttc atggagctca agatgtcttg tgtctgtgtg gctagatggc
3301 ctctgcttgc tccccaggtg tgtactggta gacaactgct cccaggagct ggcatagaag
3361 caaacctgca ggaaaagcca acccactcca ggtgtgtgga agctgctggc aggaacccag
3421 caaggatcca gctgggttgt aatggaaaca atgcaaccaa caatccttga gcgagccggg
3481 atagatgtgg cctcatcact gaagatttca tctgagacct ctgcaaatat ccaaattgta
3541 tatgctctta gagcagatca ttttctcaca ggttgtctaa ccaaaggaaa ggaaatcagc
3601 atatcaaaga gatatctgca ctcccatgtt gattgcagca ctgttcacaa cagccaagat
3661 gtggaatcaa ccagagtgtc cattggcaga tgaatggatt aaaaatgtgg tgcatggaaa
3721 aaaaaaaaaa aa
//