LOCUS BC146760 4982 bp mRNA linear HUM 12-JUL-2007
DEFINITION Homo sapiens RAB3 GTPase activating protein subunit 2
(non-catalytic), mRNA (cDNA clone MGC:166829 IMAGE:9007199),
complete cds.
ACCESSION BC146760
VERSION BC146760.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4982)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4982)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Kazusa DNA Research Inst.
cDNA Library Preparation: Kazusa DNA Research Institute
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCF Plate: 9 Row: c Column: 6.
FEATURES Location/Qualifiers
source 1..4982
/db_xref="H-InvDB:HIT000435552"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:166829 IMAGE:9007199"
/tissue_type="Clones donated by Kazusa DNA Research Inst."
/clone_lib="Kazusa-KIAA-pBluescriptIISK+"
/lab_host="DH5alpha T1-resistant"
/note="Vector: pBluescript II SK+"
gene 1..4982
/gene="RAB3GAP2"
/gene_synonym="DKFZP434D245"
/gene_synonym="p150"
/gene_synonym="RAB3-GAP150"
/gene_synonym="RAB3GAP150"
/gene_synonym="RP11-568G11.1"
/db_xref="GeneID:25782"
/db_xref="HGNC:HGNC:17168"
/db_xref="MIM:609275"
CDS 1..4182
/gene="RAB3GAP2"
/gene_synonym="DKFZP434D245"
/gene_synonym="p150"
/gene_synonym="RAB3-GAP150"
/gene_synonym="RAB3GAP150"
/gene_synonym="RP11-568G11.1"
/codon_start=1
/product="RAB3 GTPase activating protein subunit 2
(non-catalytic)"
/protein_id="AAI46761.1"
/db_xref="GeneID:25782"
/db_xref="HGNC:HGNC:17168"
/db_xref="MIM:609275"
/translation="MACSIVQFCYFQDLQAARDFLFPHLREEILSGALRRDPSKSTDW
EDDGWGAWEENEPQEPEEEGNTCKTQKTSWLQDCVLSLSPTNDLMVIAREQKAVFLVP
KWKYSDKGKEEMQFAVGWSGSLNVEEGECVTSALCIPLASQKRSSTGRPDWTCIVVGF
TSGYVRFYTENGVLLLAQLLNEDPVLQLKCRTYEIPRHPGVTEQNEELSILYPAAIVT
IDGFSLFQSLRACRNQVAKAAASGNENIQPPPLAYKKWGLQDIDTIIDHASVGIMTLS
PFDQMKTASNIGGFNAAIKNSPPAMSQYITVGSNPFTGFFYALEGSTQPLLSHVALAV
ASKLTSALFNAASGWLGWKSKHEEEAVQKQKPKVEPATPLAVRFGLPDSRRHGESICL
SPCNTLAAVTDDFGRVILLDVARGIAIRMWKGYRDAQIGWIQTVEDLHERVPEKADFS
PFGNSQGPSRVAQFLVIYAPRRGILEVWSTQQGPRVGAFNVGKHCRLLYPGYKIMGLN
NVTSQSWQPQTYQICLVDPVSGSVKTVNVPFHLALSDKKSERAKDMHLVKKLAALLKT
KSPNLDLVETEIKELILDIKYPATKKQALESILASERLPFSCLRNITQTLMDTLKSQE
LESVDEGLLQFCANKLKLLQLYESVSQLNSLDFHLDTPFSDNDLALLLRLDEKELLKL
QALLEKYKQENTRTNVRFSDDKDGVLPVKTFLEYLEYEKDVLNIKKISEEEYVALGSF
FFWKCLHGESSTEDMCHTLESAGLSPQLLLSLLLSVWLSKEKDILDKPQSICCLHTML
SLLSKMKVAIDETWDSQSVSPWWQQMRTACIQSENNGAALLSAHVGHSVAAQISNNMT
EKKFSQTVLGADSEALTDSWEALSLDTEYWKLLLKQLEDCLILQTLLHSKGNTQTSKV
SSLQAEPLPRLSVKKLLEGGKGGIADSVAKWIFKQDFSPEVLKLANEERDAENPDEPK
EGVNRSFLEVSEMEMDLGAIPDLLHLAYEQFPCSLELDVLHAHCCWEYVVQWNKDPEE
ARFFVRSIEHLKQIFNAHVQNGIALMMWNTFLVKRFSAATYLMDKVGKSPKDRLCRRD
VGMSDTAMTSFLGSCLDLLQILMEADVSRDEIQVPVLDTEDAWLSVEGPISIVELALE
QKHIHYPLVEHHSILCSILYAVMRFSLKTVKPLSLFDSKGKNAFFKDLTSIQLLPSGE
MDPNFISVRQQFLLKVVSAAVQAQHSATKVKDPTEEATPTPFGKDQDWPALAVDLAHH
LQVSEDVVRRHYVGELYNYGVDHLGEEAILQVHDKEVLASQLLVLTGQRLAHALLHTQ
TKEGMELLARLPPTLCTWLKAMDPQDLQNTEVPIATTAKLVNKVIELLPEKHGQYGLA
LHLIEAVEAISLPSL"
BASE COUNT 1509 a 987 c 1095 g 1391 t
ORIGIN
1 atggcctgct ccattgtcca gttctgctac ttccaggacc tccaggccgc ccgggacttc
61 ctctttcctc acctgcggga ggagatcctc agcggcgcct tgcggaggga ccccagtaaa
121 tcaacagact gggaagatga tggttgggga gcatgggaag aaaatgaacc acaagaacct
181 gaagaagaag gaaatacttg caaaacacaa aaaacttcct ggctccaaga ttgtgtttta
241 tccttatctc caaccaatga tcttatggtg atagctcgag agcaaaaagc tgtatttcta
301 gtgccaaaat ggaaatatag tgataaagga aaggaagaaa tgcaatttgc tgttggctgg
361 agtggttcct taaatgtcga agaaggggaa tgtgtaacca gtgctctatg tatcccacta
421 gcaagccaaa agaggagttc cactgggcgt cctgactgga cctgcattgt ggtgggtttt
481 acttcaggtt atgtacgctt ctacactgag aatggtgtgc tcttgcttgc acagcttttg
541 aatgaggacc cagtacttca acttaaatgc agaacctatg aaataccacg acatcccggc
601 gtgactgagc agaatgaaga gttgagtatc ttatatccag ctgccattgt gactattgat
661 ggatttagcc tttttcaatc tcttcgtgct tgtcgaaatc aggtagcaaa agctgcagca
721 tcaggcaacg agaacataca accaccacca ttagcttata agaaatgggg tctacaagat
781 attgacacta ttattgatca tgctagtgtt ggtattatga ctctgtcccc ctttgatcaa
841 atgaagactg cctccaatat aggtggattt aatgcagcaa ttaaaaatag tccacctgcc
901 atgtctcagt atatcactgt agggtccaat ccatttactg gcttcttcta tgctttagag
961 ggaagcacac aaccattatt atcccatgtt gcactagcag ttgcaagtaa actcacttct
1021 gctttattta atgctgccag tggttggctt ggttggaaaa gtaagcacga agaagaagct
1081 gtccaaaagc aaaagccgaa ggttgagcca gctaccccat tagctgtaag atttggactt
1141 ccagattcta gacgccatgg tgaaagcata tgtctgtctc catgtaacac actggcagca
1201 gtaacagatg atttcggcag agttatttta ttggatgtag ctagaggaat tgcaatacgc
1261 atgtggaaag ggtaccgcga cgcacaaatt ggatggattc aaactgtaga ggacctccat
1321 gaaagagtgc cagaaaaggc agatttttcc ccctttggaa attctcaggg tccaagtcga
1381 gtagctcaat tccttgtgat ctatgcgcca agaaggggaa ttttagaagt gtggagcaca
1441 cagcagggac ctagagtagg agctttcaat gtggggaagc actgcaggct gctgtatcct
1501 ggctataaaa taatgggttt aaataatgtt accagtcaga gttggcagcc acagacttat
1561 cagatctgtc tggttgatcc agtgtctgga agtgtgaaaa cagtgaacgt tcccttccat
1621 ttagcactga gtgataagaa gagtgaacga gccaaggata tgcacctagt gaagaaacta
1681 gcagccttac tgaaaacaaa atctcccaat cttgatttgg ttgaaacaga aataaaggaa
1741 ttaattcttg atattaaata ccctgcaacc aaaaaacaag ctttggaaag cattttggca
1801 agtgaacgtt taccattttc ttgccttaga aacatcactc agactttaat ggacacttta
1861 aaaagtcaag aacttgagtc tgttgatgaa ggattgctac agttttgtgc caataaacta
1921 aaactgctgc aactctatga gtctgtcagt caattaaatt cccttgattt tcatttagac
1981 acaccattct ctgataatga cttggctctg ttactaaggc ttgatgaaaa agaactgctt
2041 aagctccagg cattactaga gaaatataag caagagaaca ccaggacaaa tgttcgattt
2101 tctgatgata aagatggtgt gttgcctgta aaaacattct tggaatattt agaatatgaa
2161 aaggatgtgc tcaacataaa gaaaataagt gaagaggaat atgtggcttt aggtagtttc
2221 tttttttgga agtgtttgca tggagaaagc tccactgagg atatgtgtca cactttggag
2281 tcggctggtc ttagccctca gctgttgttg tctctgctcc tgagtgtttg gctttcaaag
2341 gaaaaggata ttttggataa accacagtca atctgctgtc ttcataccat gctgtccctc
2401 ctgagcaaga tgaaagtggc catcgatgag acctgggatt ctcagtctgt gtccccatgg
2461 tggcagcaga tgcgcacagc ctgtattcag tctgagaaca atggagccgc tctgttgtct
2521 gcgcatgttg ggcattctgt tgctgcacag atatcaaaca acatgacaga gaaaaaattt
2581 tcccaaacag ttttgggtgc tgattcagag gccctcactg attcctggga ggcactttct
2641 cttgacactg agtactggaa actccttctg aaacagctgg aggattgtct catacttcag
2701 actctgcttc acagcaaagg gaacactcag acctccaaag tgtcatcact gcaggctgag
2761 ccacttccaa ggctttctgt taaaaagtta ttagaaggag gaaaaggtgg cattgcagac
2821 agtgtagcca agtggatatt taaacaggac ttcagccctg aagtattaaa actggctaat
2881 gaagaaagag atgcagaaaa cccagatgaa cccaaagaag gtgttaacag aagtttcctt
2941 gaggtatcag agatggagat ggacttagga gccataccag acttactgca tttagcctat
3001 gagcagtttc cttgtagcct tgagctcgat gtcttgcatg cacattgctg ctgggagtac
3061 gttgttcagt ggaataaaga tccagaggaa gcacgttttt ttgttaggtc aatagaacac
3121 ttgaagcaaa tatttaatgc acatgttcaa aatggcattg cactgatgat gtggaatacg
3181 ttcttagtta aaagattttc tgctgctaca tacttaatgg ataaggttgg aaaatcacca
3241 aaagataggt tatgccgaag ggatgtggga atgagtgaca cagcaatgac atctttcctc
3301 ggctcctgtt tggatcttct tcagatctta atggaggcag atgttagcag ggatgaaata
3361 caggtgcctg tgctggatac tgaggatgcg tggctctccg tggaaggacc aatctccata
3421 gtggaactgg cccttgaaca gaagcacatc cactacccac tggtggagca ccactccatc
3481 ctgtgctcca tcttgtatgc agtcatgagg ttttctctga agaccgtgaa gccactttca
3541 ctttttgaca gtaagggaaa aaatgcattt ttcaaagacc taacttcaat tcagttatta
3601 cctagtgggg aaatggatcc aaattttatt tctgtacgac aacagttctt attgaaagtt
3661 gtcagtgcag ctgtccaggc ccaacattca gccacaaagg tcaaagatcc cacagaagag
3721 gccacaccca ctccttttgg gaaagaccaa gattggccag ctctagctgt ggatttagcc
3781 catcaccttc aagttagtga agatgttgtt agaaggcatt atgtggggga actatacaac
3841 tatggagttg accacttagg agaagaggcc attctacagg ttcatgacaa agaggtcctt
3901 gcctctcagc tgctggtgct cacggggcaa aggctggctc atgcgcttct ccacacccag
3961 acaaaagaag gaatggagct gcttgccaga cttccaccca cactgtgtac ttggctgaaa
4021 gcaatggacc cccaggacct tcaaaacact gaagtgccaa ttgcaacaac agctaaacta
4081 gtaaataaag taattgagct tttaccagaa aaacatgggc aatatggtct agccttacac
4141 ctcattgaag ctgtggaagc catatctctt ccttctttat gacacttacc tactggaaat
4201 agtctaaaat tatgattata acatgaagta gtgcatggtt attttacata gtaagacctg
4261 gaattttatg ggaaaagtat gtcttttttt ttccttttgt aaaataaata aaagtatata
4321 caacttttaa aaagtgcaac cctggctaaa ttccactcct ttggttaata ctgaagataa
4381 aatataaaca aatgtcaact ctgttataat taatacagat gttttactgt ttatttctaa
4441 ttcaaacact taagtagctt tattgttaaa ctttgctatt taaaattggt tataatttag
4501 attatgttct tataagattc tatatttcct atctaaaatg ttgttgtaat tcaatttaaa
4561 tgtgttcatg tacagtcccc atcagtagcg tatagaacac cccactctcc tttagtaaat
4621 gttgagaaaa tgcctttgtt gtcatgctcc aaatcccaca ctgggctgcc acctgggagt
4681 tctggatacc gaaaggttcc tttcccagag gttctgctgt tgccatcaga ggaggatgac
4741 cgtgcttgag gaggaagaat gggttcaaga tcatcatatt catcagaagg ggacactaaa
4801 tagaaccctt aacctgttgt acttgccaaa attgagaatc agagatgtgt aaaatgcagc
4861 aaattaatta taatgtaagt taagatttgc tttttgccaa gttgcaaagt tgtatccaca
4921 tcaggtcact gtaaaaatgt attatcttgt aaaacttatg taaaaaaaaa aaaaaaaaaa
4981 aa
//