LOCUS BC146674 2500 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens cadherin-like 29, mRNA (cDNA clone MGC:164982
IMAGE:40148497), complete cds.
ACCESSION BC146674
VERSION BC146674.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2500)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2500)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Novartis Institute for Biomedical Research
cDNA Library Preparation: Novartis Institute for Biomedical
Research
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 306 Row: k Column: 9.
FEATURES Location/Qualifiers
source 1..2500
/db_xref="H-InvDB:HIT000435538"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:164982 IMAGE:40148497"
/tissue_type="Donated clones,Novartis FGA collection"
/clone_lib="NIH_MGC_417"
/lab_host="DH5a"
/note="Vector: pCMV-SPORT6"
gene 1..2500
/gene="CDH29"
/gene_synonym="PRO34300"
/db_xref="GeneID:389118"
/db_xref="HGNC:HGNC:34527"
CDS 10..2376
/gene="CDH29"
/gene_synonym="PRO34300"
/codon_start=1
/product="CDH29 protein"
/protein_id="AAI46675.1"
/db_xref="GeneID:389118"
/db_xref="HGNC:HGNC:34527"
/translation="MVLLRLLVFLFAPVVSDLCSLPCFINVSESQGPGTVLQFLSFNC
SSYTPTPTLELLNVQPPTTFFNPPSLARWQGTYVGKLTLSSSAQLDALMVNHYKVQLK
FTCGNHVMEGSLSVDVQRDLSHIQCAGQFASPAGEMIQVPETVTPGARLYTLLLPGLE
LHGAQMSIISAQDLPHFPGPFSINEQGWLQAPSQGLLGQAQKVFQLQISVSFGQRQSC
QGMVIVKVLPVPSSQVSFLEQAQNITIPENLAPGSEVVQVQARGVDLRYEILSPVPSP
LFSIGRADGVVRTTTPLELARTSGTAVSRLQVKAFEQGQLWASAKLNLTMNVQLVNLW
PPRCLPALLVSQIPETAPVGTVLNTLTCEDPDSVGATLDYKLWFRSSSNPASLCLYDR
VLEVNATLDCDTPGACFQHAASILVLDGGQPQMTTEVPVLVMVTPINEFSPACAPRTF
RVQEDAAPHTLLGSVVGTDMDYPHDNIEYYTSGGPTTFAVDRLSGEVHLLGPLDYEQQ
RLYRLTVLVIDHGQDQNPNHHLSGSCTITIEVEDVNDHAPECEPPFQELTIYAPLGRS
VEVTKMSCQIPQEPQRLIYSYSIVGGNSQNRFILQGAILVHSDLVLGPFWPEQPRTYE
LLICVADAGPSTPHLSTTATIIVHLVPRRASTVATSTHRTTVPSTMTPMLVTDTEAFW
QPQPWFVVVLTATGALLLLALGWLLGRLLQGLAQLLQAPSKPAQALLLNSIQGTEGSI
EGFLEAPKMEMSQAPSSVMSLHFDGRAQDSRTGRDYLFNTHTGARRWL"
BASE COUNT 532 a 776 c 642 g 550 t
ORIGIN
1 caggtcatca tggtgctgct caggctcctc gtgttcctct ttgctccggt ggtctctgac
61 ctctgcagcc tgccctgctt tataaatgtc tctgagagcc agggccctgg cacagtcctt
121 cagtttttat ccttcaactg ctcctcctac acgcccacac ccaccctgga gttgctcaat
181 gtccagccac ccaccacctt cttcaaccca cccagcttgg ccaggtggca agggacctat
241 gtgggcaagt tgaccttgag cagctctgct cagttggatg ccctgatggt gaaccactac
301 aaggtgcagc tgaagttcac atgtggcaac catgtgatgg agggctcact ctctgtggat
361 gtgcagcggg accttagcca tatccagtgt gctggtcaat ttgccagccc agctggggaa
421 atgattcagg tgccagagac agtcacacct ggggctcggc tgtacactct gctcctccca
481 ggcctagaac tccacggagc gcagatgagc attatcagtg cccaggacct gccacacttc
541 cctggacctt tctccatcaa tgagcaaggt tggctgcagg caccatccca gggcctccta
601 ggccaggctc aaaaggtctt ccagctgcaa atctcagtgt cctttggaca aaggcaaagc
661 tgccaaggga tggtgatagt gaaggttttg cctgttccct ccagccaggt ctccttcctc
721 gagcaggctc agaatatcac catccctgag aatctggccc ccggtagtga ggtggttcag
781 gtccaggccc ggggtgtcga cctgcgctat gaaatcctgt ctccggtgcc cagcccactc
841 ttctccattg gtcgtgcaga cggtgtggtc cggaccacca cgcccctaga gttagctcgc
901 acctcaggca ccgcggtctc caggctgcag gtgaaggcct ttgagcaggg ccagctgtgg
961 gccagtgcca agctcaatct caccatgaat gtgcagctgg tcaacctctg gcctccacgc
1021 tgcctcccag cgcttctggt gtcccaaatc ccggagactg cacccgtggg caccgtgctg
1081 aatactctca cttgcgaaga tccggactct gttggtgcca ccctggacta caagctgtgg
1141 ttccgcagct cttccaaccc tgccagcctc tgcctttatg acagagtcct tgaggtgaat
1201 gccacactgg actgtgacac tcctggagcc tgcttccagc atgcagcctc catcctggtg
1261 ctcgatggtg gccagcccca gatgaccact gaggtgccgg tactggtgat ggtgacaccc
1321 atcaacgagt tctccccagc ctgtgcccct cgcacgttcc gggttcagga ggatgcggcg
1381 ccccacactc tactgggctc cgtggtgggc acggatatgg attaccctca cgacaacatt
1441 gagtactaca cctctggtgg tcctaccacc tttgctgtgg accgtctcag cggggaagtt
1501 cacctcctgg gacctttgga ctatgagcag cagaggctgt acaggctcac tgtccttgtg
1561 attgaccatg gccaagacca gaaccccaac catcacctct caggctcctg taccattacc
1621 atcgaggttg aggatgtgaa tgaccatgcc cccgagtgtg agcccccatt tcaggaactc
1681 accatctatg ctcctctggg ccgtagcgtg gaggtgacca agatgtcatg ccagatccct
1741 caggagccac agcgcctgat ctactcctat agcatcgtgg gagggaatag ccagaaccga
1801 ttcatcctgc aaggggccat cctggtgcac agtgaccttg tgttggggcc gttctggcca
1861 gagcagcccc gtacctatga gctactgatc tgtgtggccg atgcaggccc ctccaccccc
1921 cacctcagca ccacagccac cattattgtg catctagttc cccggagggc cagcacagtg
1981 gccaccagca cccacagaac cacagtgccc tcaacgatga cacccatgct cgtgacagac
2041 acagaggctt tctggcagcc acagccctgg tttgtggtgg tgttgacagc aactggtgct
2101 cttctcctct tggccctagg ctggcttctt ggcaggctcc tccaggggtt ggcccagctg
2161 ctgcaagcac ccagcaaacc agcccaggct ttgctgctaa acagcatcca gggaactgag
2221 ggatccatcg agggtttcct ggaggcaccg aagatggaga tgtcccaggc acccagcagt
2281 gtcatgagtc tgcattttga tggcagagca caggactccc gtaccggaag agactacctg
2341 tttaacacac acacaggagc ccggcgctgg ctctgaggcc aagtagctgt cttactatgt
2401 gtggaatttc tttttcacac catcatgggc tgtattttca agttgattca taataaacaa
2461 aattacaaaa agaaaaaaaa aaaaaaaaaa aaaaaaaaaa
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