LOCUS BC146647 5811 bp mRNA linear HUM 12-JUL-2007
DEFINITION Homo sapiens mannose receptor, C type 2, mRNA (cDNA clone
MGC:164751 IMAGE:40147137), complete cds.
ACCESSION BC146647
VERSION BC146647.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5811)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5811)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (16-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Novartis Institute for Biomedical Research
cDNA Library Preparation: Novartis Institute for Biomedical
Research
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 306 Row: a Column: 18.
FEATURES Location/Qualifiers
source 1..5811
/db_xref="H-InvDB:HIT000435511"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:164751 IMAGE:40147137"
/tissue_type="Donated clones,Novartis FGA collection"
/clone_lib="NIH_MGC_417"
/lab_host="DH5a"
/note="Vector: pCMV-SPORT6"
gene 1..5811
/gene="MRC2"
/gene_synonym="CD280"
/gene_synonym="CLEC13E"
/gene_synonym="ENDO180"
/gene_synonym="UPARAP"
/db_xref="GeneID:9902"
/db_xref="HGNC:HGNC:16875"
CDS 122..4561
/gene="MRC2"
/gene_synonym="CD280"
/gene_synonym="CLEC13E"
/gene_synonym="ENDO180"
/gene_synonym="UPARAP"
/codon_start=1
/product="mannose receptor, C type 2"
/protein_id="AAI46648.1"
/db_xref="GeneID:9902"
/db_xref="HGNC:HGNC:16875"
/translation="MGPGRPAPAPWPRHLLRCVLLLGCLHLGRPGAPGDAALPEPNVF
LIFSHGLQGCLEAQGGQVRVTPACNTSLPAQRWKWVSRNRLFNLGTMQCLGTGWPGTN
TTASLGMYECDREALNLRWHCRTLGDQLSLLLGARTSNISKPGTLERGDQTRSGQWRI
YGSEEDLCALPYHEVYTIQGNSHGKPCTIPFKYDNQWFHGCTSTGREDGHLWCATTQD
YGKDERWGFCPIKSNDCETFWDKDQLTDSCYQFNFQSTLSWREAWASCEQQGADLLSI
TEIHEQTYINGLLTGYSSTLWIGLNDLDTSGGWQWSDNSPLKYLNWESDQPDNPSEEN
CGVIRTESSGGWQNRDCSIALPYVCKKKPNATAEPTPPDRWANVKVECEPSWQPFQGH
CYRLQAEKRSWQESKKACLRGGGDLVSIHSMAELEFITKQIKQEVEELWIGLNDLKLQ
MNFEWSDGSLVSFTHWHPFEPNNFRDSLEDCVTIWGPEGRWNDSPCNQSLPSICKKAG
QLSQGAAEEDHGCRKGWTWHSPSCYWLGEDQVTYSEARRLCTDHGSQLVTITNRFEQA
FVSSLIYNWEGEYFWTALQDLNSTGSFFWLSGDEVMYTHWNRDQPGYSRGGCVALATG
SAMGLWEVKNCTSFRARYICRQSLGTPVTPELPGPDPTPSLTGSCPQGWASDTKLRYC
YKVFSSERLQDKKSWVQAQGACQELGAQLLSLASYEEEHFVANMLNKIFGESEPEIHE
QHWFWIGLNRRDPRGGQSWRWSDGVGFSYHNFDRSRHDDDDIRGCAVLDLASLQWVAM
QCDTQLDWICKIPRGTDVREPDDSPQGRREWLRFQEAEYKFFEHHSTWAQAQRICTWF
QAELTSVHSQAELDFLSHNLQKFSRAQEQHWWIGLHTSESDGRFRWTDGSIINFISWA
PGKPRPVGKDKKCVYMTASREDWGDQRCLTALPYICKRSNVTKETQPPDLPTTALGGC
PSDWIQFLNKCFQVQGQEPQSRVKWSEAQFSCEQQEAQLVTITNPLEQAFITASLPNV
TFDLWIGLHASQRDFQWVEQEPLMYANWAPGEPSGPSPAPSGNKPTSCAVVLHSPSAH
FTGRWDDRSCTEETHGFICQKGTDPSLSPSPAALPPAPGTELSYLNGTFRLLQKPLRW
HDALLLCESHNASLAYVPDPYTQAFLTQAARGLRTPLWIGLAGEEGSRRYSWVSEEPL
NYVGWQDGEPQQPGGCTYVDVDGAWRTTSCDTKLQGAVCGVSSGPPPPRRISYHGSCP
QGLADSAWIPFREHCYSFHMELLLGHKEARQRCQRAGGAVLSILDEMENVFVWEHLQS
YEGQSRGAWLGMNFNPKGGTLVWQDNTAVNYSNWGPPGLGPSMLSHNSCYWIQSNSGL
WRPGACTNITMGVVCKLPRAEQSSFSPSALPENPAALVVVLMAVLLLLALLTAALILY
RRRQSIERGAFEGARYSRSSSSPTEATEKNILVSDMEMNEQQE"
BASE COUNT 1207 a 1800 c 1818 g 986 t
ORIGIN
1 cgacccggag gaggacgcga gccccttgcg ggcggtcatc acagcccagc ctcggggctg
61 ccacagcgcg ttgcgcctgt gcgccctcgg tccccgcgtc cactgagcgc cgcgctcggg
121 gatggggccc ggccggccgg cccccgcgcc ctggcctcgt cacctgctgc gctgcgtcct
181 gctcctcggg tgcctgcacc tcggccgtcc cggcgcccct ggggacgccg ccctcccgga
241 acccaacgtc ttcctcatct tcagccatgg actgcagggc tgcctggagg cccagggcgg
301 gcaggtcaga gtcaccccgg cttgcaatac cagcctccct gcccagcgct ggaagtgggt
361 ctcccgaaac cggctattca acctgggtac catgcagtgc ctgggcacag gctggccagg
421 caccaacacc acggcctccc tgggcatgta tgagtgtgac cgggaagcac tgaatcttcg
481 ctggcattgt cgtacactgg gtgaccagct gtccttgctc ctgggggccc gcaccagcaa
541 catatccaag cctggcaccc ttgagcgtgg tgaccagacc cgcagtggcc agtggcgcat
601 ctacggcagc gaggaggacc tatgtgctct gccctaccac gaggtctaca ccatccaggg
661 aaactcccac ggaaagccgt gcaccatccc cttcaaatat gacaaccagt ggttccacgg
721 ctgcaccagc acgggccgcg aggatggtca cctgtggtgt gccaccaccc aggactacgg
781 caaagacgag cgctggggct tctgccccat caagagtaac gactgcgaga ccttctggga
841 caaggaccag ctgactgaca gctgctacca gtttaacttc cagtccacgc tgtcgtggag
901 ggaggcctgg gccagctgcg agcagcaggg tgcggatctg ctgagcatca cggagatcca
961 cgagcagacc tacatcaacg gcctcctcac tgggtacagc tccaccctgt ggatcggctt
1021 gaatgacttg gacacgagcg gaggctggca gtggtcggac aactcgcccc tcaagtacct
1081 caactgggag agtgaccagc cggacaaccc cagtgaggag aactgtggag tgatccgcac
1141 tgagtcctcg ggcggctggc agaaccgtga ctgcagcatc gcgctgccct atgtgtgcaa
1201 gaagaagccc aacgccacgg ccgagcccac ccctccagac aggtgggcca atgtgaaggt
1261 ggagtgcgag ccgagctggc agcccttcca gggccactgc taccgcctgc aggccgagaa
1321 gcgcagctgg caggagtcca agaaggcatg tctacggggc ggtggcgacc tggtcagcat
1381 ccacagcatg gcggagctgg aattcatcac caagcagatc aagcaagagg tggaggagct
1441 gtggatcggc ctcaacgatt tgaaactgca gatgaatttt gagtggtctg acgggagcct
1501 tgtgagcttc acccactggc acccctttga gcccaacaac ttccgggaca gtctggagga
1561 ctgtgtcacc atctggggcc cggaaggccg ctggaacgac agtccctgta accagtcctt
1621 gccatccatc tgcaagaagg caggccagct gagccagggg gccgccgagg aggaccatgg
1681 ctgccggaag ggttggacgt ggcacagccc atcctgctac tggctgggag aagaccaagt
1741 gacctacagt gaggcccggc gcctgtgcac tgaccatggc tctcagctgg tcaccatcac
1801 caacaggttc gagcaggcct tcgtcagcag cctcatctac aactgggagg gcgagtactt
1861 ctggacggcc ctgcaggacc tcaacagcac cggctccttc ttctggctca gtggggatga
1921 agtcatgtac acccactgga accgggacca gcccgggtac agccgtgggg gctgcgtggc
1981 gctggccact ggcagcgcca tggggctgtg ggaggtgaag aactgtacct cgttccgggc
2041 ccgctacatc tgccggcaga gcctgggcac tccagtgacg ccggagctgc cggggccaga
2101 tcccacgccc agcctcactg gctcctgtcc ccagggctgg gcctcggaca ccaaactccg
2161 gtattgctat aaggtgttca gctcagagcg gctgcaggac aagaagagct gggtccaggc
2221 ccagggggcc tgccaggagc tgggggccca gctgctgagc ctggccagct acgaggagga
2281 gcactttgtg gccaacatgc tcaacaagat cttcggtgaa tcagaacccg agatccacga
2341 gcagcactgg ttctggatcg gcctgaaccg tcgggatccc agagggggtc agagttggcg
2401 ctggagcgac ggcgtagggt tctcttacca caatttcgac cggagccggc acgacgacga
2461 cgacatccga ggctgtgcgg tgctggacct ggcctccctg cagtgggtgg ccatgcagtg
2521 cgacacacag ctggactgga tctgcaagat ccccagaggt acggacgtgc gggagcccga
2581 cgacagccct caaggccgac gggaatggct gcgcttccag gaggccgagt acaagttctt
2641 tgagcaccac tccacgtggg cgcaggcgca gcgcatctgc acgtggttcc aggccgagct
2701 gacctccgtg cacagccagg cggagctaga cttcctgagc cacaacttgc agaagttctc
2761 ccgggcccag gagcagcact ggtggatcgg cctgcacacc tctgagagcg atgggcgctt
2821 cagatggaca gatggttcca ttataaactt catctcctgg gcaccaggca aacctcggcc
2881 tgtcggcaag gacaagaagt gcgtgtacat gacagccagc cgagaggact ggggggacca
2941 gaggtgcctg acagccttgc cctacatctg caagcgcagc aacgtcacca aagaaacgca
3001 gcccccagac ctgccaacta cagccctggg gggctgcccc tctgactgga tccagttcct
3061 caacaagtgt tttcaggtcc agggccagga accccagagc cgggtgaagt ggtcagaggc
3121 acagttctcc tgtgaacagc aagaggccca gctggtcacc atcacaaacc ccttagagca
3181 agcattcatc acagccagcc tgcccaatgt gacctttgac ctttggattg gcctccatgc
3241 ctcgcagagg gacttccagt gggtggagca ggagcctttg atgtatgcca actgggcacc
3301 tggggagccc tctggcccta gccctgctcc cagtggcaac aaaccgacca gctgtgcggt
3361 ggtcctgcac agcccctcag cccacttcac tggccgctgg gacgatcgga gctgcacgga
3421 ggagacccat ggcttcatct gccagaaggg cacggacccc tccctgagcc cgtccccagc
3481 agcgctgccc cccgccccgg gcactgagct ctcctacctc aacggcacct tccggctgct
3541 tcagaagccg ctgcgctggc acgatgccct cctgctgtgt gagagccaca atgccagcct
3601 ggcctacgtg cccgacccct acacccaggc cttcctcacg caggctgccc gagggctgcg
3661 cacgccgctc tggattgggc tggctggcga ggagggctct cggcggtact cctgggtctc
3721 agaggagccg ctgaactacg tgggctggca ggacggggag ccgcagcagc cggggggctg
3781 tacctacgta gatgtggacg gggcctggcg caccaccagc tgtgacacca agctgcaggg
3841 ggctgtgtgt ggggttagca gtgggccccc tcctccccga agaataagct accatggcag
3901 ctgtccccag ggactggcag actccgcgtg gattcccttc cgggagcact gctattcttt
3961 ccacatggag ctgctgctgg gccacaagga ggcgcgacag cgctgccaga gagcgggtgg
4021 ggccgtcctg tctatcctgg atgagatgga gaatgtgttt gtctgggagc acctgcagag
4081 ctatgagggc cagagtcggg gcgcctggct gggcatgaac ttcaacccca aaggaggcac
4141 tctggtctgg caggacaaca cagctgtgaa ctactccaac tgggggcccc cgggcttggg
4201 ccccagcatg ctgagccaca acagctgcta ctggattcag agcaacagcg ggctatggcg
4261 ccccggcgct tgcaccaaca tcaccatggg tgtcgtctgc aagcttcctc gtgctgagca
4321 gagcagcttc tccccatcag cgcttccaga gaacccagcg gccctggtgg tggtgctgat
4381 ggcggtgctg ctgctcctgg ccttgctgac cgcagccctc atcctttacc ggaggcgcca
4441 gagcatcgag cgcggggcct ttgagggtgc ccgctacagc cgcagcagct ccagccccac
4501 cgaggccact gagaagaaca tcctggtgtc agacatggaa atgaatgagc aacaagaata
4561 gagccaggcg cgtgggcagg gccagggcgg gaggagctgg ggagctgggg ccctgggtca
4621 gtctggcccc ccaccagctg cctgtccagt tggcctatgg aagggtgccc ttgggagtcg
4681 ctgttgggag ccggagctgg gcagagcctg ggctggtggg gtgccaccct cccacaaggg
4741 ctgggctgag acccagctga gtgcagcgtg gcgtttccct ttctgggggg gcctgaggtc
4801 ttgtcacctg gtcctgtgcc cccacaggaa ccagaggtag gatgggaggg ggaacgagag
4861 cctctttctc cccagagccc ccggcccagg cctgttgatc cgcgccccag gacccccttc
4921 tttgcagagc ccgaggagcc tcccctgtcc cctcgggcag atctgttgtg tctctcttcc
4981 cacctggcag cctcagctct gtgcccctca ccctgctccc tctcgcccct tctctcccac
5041 cccttccttc tgagccgggc cctggggatt ggggagccct cttgttcctg atgagggtca
5101 gctgaggggg ctgagcatcc atcactcctg tgcctgctgg ggtggctgtg gggcgtggca
5161 ggaggggcct aggtgggttg ggcctgagaa ccagggcacg ggtgtggtgt ctgctgggct
5221 ggagataaga ctggggagag acaccccaac ctcccagggt gggagctggg ccgggctggg
5281 atgtcatctc ctgccgggcg ggggagggct ctgcccctgg aagagtcccc tgtggggacc
5341 aaaataagtt ccctaacatc tccagctcct ggctctggtt tggagcaagg ggaagggttg
5401 ccagagtcct gggggcccca gaggagcagg agtctgggag ggcccagagt tcaccctcta
5461 gtggatccag gaggagcagc acccgagccc tggagtggcc cagtaccctt ccaagaggcc
5521 acagtcccag ccaggacaaa gtatgcggcc catcctggtg cgacagcgtg ggacaatgtg
5581 aacatggact cgaagacatg gccctttctc tgtagttgat tttttaaatg tgccattatt
5641 gtttttaaaa aaaaaggaaa aaagaaaagc aaacaaataa aacaccttta agaggcttga
5701 aagagtgtag aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
5761 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa a
//