LOCUS BC144563 2799 bp mRNA linear HUM 18-MAR-2009 DEFINITION Homo sapiens inositol 1,4,5-triphosphate receptor, type 1, mRNA (cDNA clone IMAGE:9053091), complete cds. ACCESSION BC144563 VERSION BC144563.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2799) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2799) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: LLDM Plate: 677 Row: j Column: 1 This clone has the following problem: The cds is short compared to the longest cds in the locus isoform, single-stranded. FEATURES Location/Qualifiers source 1..2799 /db_xref="H-InvDB:HIT000502969" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:9053091" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_312" /note="Vector: pCR-XL-TOPO; Clone identification sequence tag: CCCCGTTT" gene 1..2799 /gene="ITPR1" /gene_synonym="INSP3R1" /gene_synonym="IP3R" /gene_synonym="IP3R1" /db_xref="GeneID:3708" /db_xref="HGNC:HGNC:6180" /db_xref="MIM:147265" CDS 149..2314 /gene="ITPR1" /gene_synonym="INSP3R1" /gene_synonym="IP3R" /gene_synonym="IP3R1" /codon_start=1 /product="ITPR1 protein" /protein_id="AAI44564.1" /db_xref="GeneID:3708" /db_xref="HGNC:HGNC:6180" /db_xref="MIM:147265" /translation="MSDKMSSFLHIGDICSLYAEGSTNGFISTLGLVDDRCVVQPETG DLNNPPKKFRDCLFKLCPMNRYSAQKQFWKAAKPGANSTTDAVLLNKLHHAADLEKKQ NETENRKLLGTVIQYGNVIQLLHLKSNKYLTVNKRLPALLEKNAMRVTLDEAGNEGSW FYIQPFYKLRSIGDSVVIGDKVVLNPVNAGQPLHASSHQLVDNPGCNEVNSVNCNTSW KIVLFMKWSDNKDDILKGGDVVRLFHAEQEKFLTCDEHRKKQHVFLRTTGRQSATSAT SSKALWEVEVVQHDPCRGGAGYWNSLFRFKHLATGHYLAAEVDPDFEEECLEFQPSVC NKIIFLMSFVGNCGTFTRGYRAMVLDVEFLYHLLYLVICAMGLFVHEFFYSLLLFDLV YREETLLNVIKSVTRNGRSIILTAVLALILVYLFSIVGYLFFKDDFILEVDRLPNETA VPETGESLASEFLFSDVCRVESGENCSSPAPREELVPAEETEQDKEHTCETLLMCIVT VLSHGLRSGGGVGDVLRKPSKEEPLFAARVIYDLLFFFMVIIIVLNLIFGVIIDTFAD LRSEKQKKEEILKTTCFICGLERDKFDNKTVTFEEHIKEEHNMWHYLCFIVLVKVKDS TEYTGPESYVAEMIKERNLDWFPRMRAMSLVSSDSEGEQNELRNLQEKLESTMKLVTN LSGQLSELKDQMTEQRKQKQRIGLLGHPPHMNVNPQQPA" BASE COUNT 787 a 590 c 691 g 731 t ORIGIN 1 ctaacccctc tcctcgccct gctcccccaa accggcgtgg ctccccgggc accaaggagc 61 tgactacaga ggagcaggat ttgcacccct cgctgggctt gctttggcaa cagagtgcct 121 gacccaggtc aggattttca agaaagacat gtctgacaaa atgtctagct tcctacatat 181 tggagacatt tgttctctgt acgcggaggg atcgacaaat ggatttatta gcaccttggg 241 cctggttgat gatcgttgtg ttgtacagcc agaaaccggg gaccttaaca atccacctaa 301 gaaattcaga gactgcctct ttaagctatg tcccatgaac cgctactctg cccaaaagca 361 gttctggaaa gccgctaagc ctggggccaa cagcaccaca gacgcagtgc tactcaacaa 421 actgcaccac gctgcagact tggaaaagaa gcagaatgag acagaaaaca ggaaattgct 481 ggggaccgta atccagtatg gcaatgtgat ccagctcctg catttgaaaa gtaataaata 541 cctaacagtg aataagaggc ttcctgctct gttggagaag aatgccatga gagtcacatt 601 ggacgaggct ggaaatgaag ggtcctggtt ttatattcag ccattctaca agctgcgatc 661 cattggagac agcgtggtca taggtgacaa ggtggttctg aaccccgtca atgctggtca 721 gcccctacat gctagcagcc atcaactggt agataaccca ggctgcaatg aggtcaattc 781 cgtcaactgc aatacaagct ggaaaatagt ccttttcatg aaatggagtg ataacaaaga 841 cgacatatta aaggggggtg acgtggtgag gctgtttcat gctgagcagg agaagtttct 901 cacctgtgac gaacacagga agaagcagca cgtcttcctg agaaccacgg gccggcagtc 961 ggccacatct gccaccagtt caaaagccct gtgggaggtg gaggtggtcc agcatgaccc 1021 atgtcggggc ggagcagggt attggaacag ccttttccgt ttcaagcatc tggccacggg 1081 gcattacttg gcagcagagg tagaccctga ctttgaggaa gaatgcctgg agtttcagcc 1141 ctcagtatgc aataaaatca tctttctaat gagctttgtg ggcaactgtg ggacattcac 1201 aagaggctac cgagccatgg ttctggatgt tgagttcctc tatcatttgt tgtatctggt 1261 gatctgtgcc atggggctct ttgtccatga attcttctac agtctgctgc tttttgattt 1321 agtgtacaga gaagagactt tgcttaatgt cattaaaagt gtcactcgca atggacggtc 1381 catcatcctg acagcagttc tggctctgat cctcgtttac ctgttctcaa tagtgggcta 1441 tcttttcttc aaggatgact ttatcttgga agtagatagg ctgcccaatg aaacagctgt 1501 tccagaaacc ggcgagagtt tggcaagcga gttcctgttc tccgatgtgt gtagggtgga 1561 gagtggggag aactgctcct ctcctgcacc cagagaagag ctggtccctg cagaagagac 1621 ggaacaggat aaagagcaca catgtgagac gctgctgatg tgcattgtca ccgtgctgag 1681 tcacgggctg cggagcgggg gtggagtagg agatgtactc aggaagccgt ccaaagagga 1741 acccctgttt gctgctagag ttatttatga cctcttgttc ttcttcatgg tcatcatcat 1801 tgttcttaac ctgatttttg gggttatcat tgacactttt gctgacctga ggagtgagaa 1861 gcagaagaag gaagagatct tgaagaccac gtgctttatc tgtggcttgg aaagagacaa 1921 gtttgacaac aagactgtca cctttgaaga gcacatcaag gaagaacaca acatgtggca 1981 ctatctgtgc ttcatcgtcc tggtgaaagt aaaggactcc accgaatata ctgggcctga 2041 gagttacgtg gcagaaatga tcaaggaaag aaaccttgac tggttcccca ggatgagagc 2101 catgtcattg gtcagcagtg attctgaagg agaacagaat gagctgagaa acctgcagga 2161 gaagctggag tccaccatga aacttgtcac gaacctttct ggccagctgt cggaattaaa 2221 ggatcagatg acagaacaaa ggaagcagaa acaaagaatt ggtcttctag gacatcctcc 2281 tcacatgaat gtcaacccac aacaaccagc ataagcaaat gaaagaaagg aattgtattt 2341 accttttata attattatta gtgtgggtat ggctaatgag ttctgattca cccacgaagg 2401 ttacatttat gctgaataca tttgtaaata ctcagtttta tactgtatgt atatgattgc 2461 tactctaaag gtttggatat atgtattgta attagaattg ttggcatgat gacatttcat 2521 ttgtgccaaa aatattaaaa atgccttttt tggaaggact aacagaaagc acctgatttg 2581 cacttgaacc agattataga tttaaaagta tatgacatgt attttgtatt taaaactaga 2641 atagccagta tttatgtttt ttataaaact gtgcaatacg aattatgcaa tcacaataca 2701 tttgtagctc ccgagtgtcc taaagggagt gcacttcttt gaagctggtg tgttaatact 2761 atgtaataaa tggttaactt tcaaatgatg ctgctgcca //