LOCUS BC144490 4399 bp mRNA linear HTC 02-JAN-2009
DEFINITION Homo sapiens cDNA clone IMAGE:9053017, containing frame-shift
errors.
ACCESSION BC144490
VERSION BC144490.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4399)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4399)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 18 Row: O Column: 19
This clone has the following problem: frame shifted.
FEATURES Location/Qualifiers
source 1..4399
/db_xref="H-InvDB:HIT000502900"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:9053017"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_312"
/note="Vector: pCR-XL-TOPO; Clone identification sequence
tag: TCGCTTAC"
BASE COUNT 1010 a 1122 c 1155 g 1112 t
ORIGIN
1 gacacgcgag gtcaggaaga agccgcttat aaattaccgc ttccttcgcg ccgccgccaa
61 cgccgagccc cgaggaccgc aagcccagag gacaagctgc gccaagaggg agtgcggagc
121 gttcacccag cgggtcagag agcgagcggg caggcagccc ccggccggcg gaacccggca
181 cagccgagca gagcgcgggc ggcgccgcag ccaccccaga tccagaacca gaaccacagc
241 ccttctgagg agctcccaaa caaagcaagg agatggccac caaggagaag ctgcagtgtc
301 tgaaagattt ccacaaggac atcctgaagc cctcaccagg gaagagccca ggcacgcggc
361 ctgaggacga ggctgaggga aaacctccgc agagggagaa gtggtctagc aagatcgact
421 ttgtgctctc tgtggctggc ggcttcgtgg gcttgggcaa cgtctggcgc ttcccgtacc
481 tctgctacaa gaatggtgga ggtgcgtttc tcataccgta ttttattttc ctgtttggga
541 gcggcctgcc tgtgtttttc ttggagatca tcataggcca gtacacctct gaagggggca
601 tcacctgctg ggaaaagatc tgccccttgt tctctggtat cggctatgcc tccgttgtaa
661 ttgtgtccct cctgaatgtc tactacatcg tcatcctggc ctgggccaca tactacctgt
721 tccagtcctt ccagaaggag ctgccctggg cacactgcaa ccacagctgg aacacacctc
781 actgcatgga ggacaccatg cgcaagaaca agagtgtctg gatcaccatc agctccacca
841 acttcacctc ccctgtcatc gagttctggg agcgcaacgt gctgagcttg tcccctggaa
901 tcgaccaccc aggctctctg aaatgggacc tcgctctctg ccttctttta gtctggctag
961 tgtgtttctt ctgcatctgg aagggcgtca ggtccactgg gaaggtcgtc tacttcacag
1021 ccacttttcc attcgccatg ctcctggtgc tgctggtccg agggctgacg ctgccgggcg
1081 cgggcgcagg catcaagttc tatctgtatc ctgacatcac ccgccttgag gacccacagg
1141 tgtggattga cgctgggact cagatattct tctcttatgc catctgcctg ggggctatga
1201 cctcgctggg gagctacaac aagtacaagt ataactcgta caggtcctgg cctggccttc
1261 attgcctacc caaaagctgt gacaatgatg ccgctgccca cattttggtc cattcttttt
1321 tttattatgc ttctcttgct tggactggat agccagtttg ttgaagttga aggacagatc
1381 acatccttgg ttgatcttta cccatccttc ctaaggaagg gttatcgtcg ggaaatcttc
1441 atcgccttcg tgtgtagcat cagctacctg ctggggctga cgatggtgac ggagggtggc
1501 atgtatgtgt ttcagctctt tgactactat gcagctagcg gtgtatgcct tttgtgggtt
1561 gcattctttg aatgttttgt tattgcctgg atatatggag gtgataacct ttatgatggt
1621 attgaggaca tgattggcta tcggcccggg ccctggatga agtacagctg ggctgtgatc
1681 actccagttc tctgtgttgg atgtttcatc ttctcgctcg tcaagtacgt acccctgacc
1741 tacaacaaaa catacgtgta ccccaactgg gccattgggc tgggctggag cctggccctt
1801 tcctccatgc tctgcgttcc cttggtcatc gtcatccgcc tctgccagac tgaggggccg
1861 ttccttgtga gagtcaagta cctgctgacc ccaagggaac ccaaccgctg ggctgtggag
1921 cgcgagggag ccacacctta caactctcgc accgtcatga acggcgctct cgtgaaaccg
1981 acccacatca ttgtggagac catgatgtga gctctctcgg gtcgacgggg ccggcggctt
2041 tcctgctgtt tactaacatt agattctcat aggaccaggt ttacagagct ttatatttgc
2101 actaggattt tttttttttt tgtaattgtc acagaaaatg taattgtggg tatgtgtgcg
2161 tgcgtgtgtg tgtgtgtgtg tgtgtatcgt gtgtgtgtgt tttgttttga tttgggggat
2221 attttgtaca aaaagaaaac ccacgggaag atgtccgtgg agaggcagag ctttcatact
2281 gaattagatg tattttatgg gaatttggta aatttttctt tgtatttttt ttttacatat
2341 aagtatatat acacttagag attgtcatat acttttacca cttgaattga tcttcttgcc
2401 attaatagat ctcattttca aaagcaattc ttcggtgctg tgtagctggc agaaagttct
2461 gtccagtaaa cgcaggatgg aattttcctg ggactctaca cccatcttaa ggtggtatac
2521 cttccaaatc ctggttcaga tggaagaaat agcaggagag aggacccatt agctggcaga
2581 cccaggggga agaaaggagg gctgtgagga gatacctcat taaacttggc ttagtgaaga
2641 agagagatgc caaaggaatg aaccaaccct tcacataaag gagactggct gaagctgaat
2701 gaggaggccc tatagcagaa gtctgattct aagagcagta gaaacttgta ccagaagcaa
2761 aatcccactt ttaattttga gatggtgagt ggatagtcag tagaccgtca gaaccactgg
2821 ccagagaggg agctgctaga gatccaagaa ggctggcagg aatgaggctc acaactcagc
2881 ctcgcaagag gtggcagagg cacaggaggc cacagtcctt cctggggcat tccaggcaga
2941 gaaggagcag aggctctccc ggcaggagct ggggtctcag ggctcagatg agtctgttgc
3001 atttgaatgg ggtcatagca ggttctggtc attccccaag caacatctca gcatctctta
3061 aagttgcctg caggaatgaa gcatgacata cctgttgagg gactagggga gtggtgggga
3121 ggtgagtgga ccaaaggata taggccccag gcatgcagat gggcccggtg tcggggaggg
3181 gtgctttctt tcctcatctc cccactcccc actctcagcc tgggagactc ctgccaagcc
3241 ctcattaaag atgccaccct gggctgccct ggcacctagc aaggcacacc aagaacagct
3301 tttgagtctg tatcctccac tgggggaagt gctcccagtt cagaacaagg gcagcccgtg
3361 gtgctgacct aggatataac aaagctcttc acttcaaaac ccctgcaata gctgggttta
3421 cagacattta ccacctgcgg acccaaaaga gaaggcctag gagagttttc tagaaggttg
3481 ggattgtcag ggtcctggcc cctcagaact ggcttgatca agggccttat gtggagcaga
3541 ggttgtctct gaaccaggag agaaggtact atacctttca aatccccagg gcagacacac
3601 ccccacccag cccctatttg gacctaaact gtgccatttg aacagtcact tccaagctca
3661 gtctaaatga aaccgaaacg tgaccacgca caaaggcagt cactgcctcg aggggtgcag
3721 accgcagaat tttcacagca ggggctcttg gaaccctgga aacccccttc ttaaatttgg
3781 gaggaggagt atgcctttgg tgtccccctc ccaaggggca attctgaacc ccatctttgg
3841 caggcataca tatttcactg tttccaaagc tatctactct gccaaacaac acccagtcct
3901 attccaaact ctcaacaatt ctatcttgtt cctgtttttc tatgtattta tggttgccat
3961 ttgtgtctga tttgatttta ctgttttttc cctgatttta tggagtagca ttgtgacctg
4021 ttttcctttg tcttatataa ctttagtaaa ctaaccactg tcaatgattg agggcaggtg
4081 gcacgtgggg aagaggggac ttggcacgca gtggctacct gggcatttgt ggtcatttca
4141 gtttccatct ccccagcggg ggctccctgg gtgaaaggcc acagtatttt gggttggtag
4201 gcaaattgca acattctgga catggcctga ggaaggcctc ttcttataag attctcagac
4261 caaattctag accaaagaca catgcagacc aagtccccag gccccgcctg gaaggaagtc
4321 gttcctcaac tctccccaag gcacctgtct ccaatcagag ccctctcgcc cagccagccc
4381 tggctctgtg tgcagagca
//