LOCUS BC144426 1689 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens PRAME family member 11, mRNA (cDNA clone MGC:177964
IMAGE:9052947), complete cds.
ACCESSION BC144426
VERSION BC144426.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1689)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1689)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 18 Row: G Column: 9.
FEATURES Location/Qualifiers
source 1..1689
/db_xref="H-InvDB:HIT000502838"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177964 IMAGE:9052947"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_361"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: AGGTAGTT"
gene 1..1689
/gene="PRAMEF11"
/gene_synonym="RP5-845O24.2"
/db_xref="GeneID:440560"
/db_xref="HGNC:HGNC:14086"
CDS 71..1507
/gene="PRAMEF11"
/gene_synonym="RP5-845O24.2"
/codon_start=1
/product="PRAMEF11 protein"
/protein_id="AAI44427.1"
/db_xref="GeneID:440560"
/db_xref="HGNC:HGNC:14086"
/translation="MKMSIRIPPRLLELAGRSLLRDQALAVSTLEELPTELFPPLFME
AFSRRRCEALKLMVQAWPFRRLPLRPLIKMPCLEAFQAVLDGLDALLTQGVRPRRWKL
QVLDLQDVCENFWMVWSEAMAHGCFLNAKRNKTPVQDCPRMRGRQPLTVFVELWLKNR
TLDEYLTCLLLWVKQRRDLLHLCCKKLKILGMPFRNIRSILKMVNLDCIQEVEVNCKW
ILPILTQFTPYLGHMRNLQKLVLSHMDVSRYVSPEQKKEIVTQFTTQFLKLRCLQKLY
MNSVSFLEGHLDQLLSCLKTSLKVLTITNCVLLESDLKHLSQCPSISQLKTLDLSGIR
LTNYSLVPLQILLEKVAATLEYLDLDDCGIIDSQVNAILPALSRCFELNTFSFCGNPI
CMATLENLLSHTIILKNLCVELYPAPRESYGADGTLCWSRFAQIRAELMNRVRDLRHP
KRILFCTDNCPDHGDRSFYDLEADQYCC"
BASE COUNT 409 a 441 c 422 g 417 t
ORIGIN
1 tcctgcttgg ttcttcctga ggtctgagca ccttctagac tacatccaga tctgttttcc
61 ctgcagattc atgaagatga gcatccggat tccacccaga ctcctggagc ttgcggggcg
121 gagcctgctg agggaccaag ccttggccgt ctccaccctg gaggagctgc ccacggaact
181 tttcccccca ctgttcatgg aggccttcag caggagacgc tgtgaggccc tgaagctgat
241 ggtgcaggcc tggcccttcc gccgcctccc tctgaggcct ctgataaaga tgccttgtct
301 ggaggccttc caagctgtgc tcgatgggct ggatgcactg cttacccaag gggttcgtcc
361 caggagatgg aaacttcaag tgctggattt acaggatgtc tgtgagaact tctggatggt
421 ttggtctgaa gctatggccc atgggtgctt cctcaatgcc aagaggaaca aaacaccagt
481 gcaggactgt ccaaggatga gaggacggca gcccttgact gtgtttgtag aactttggct
541 caagaacagg actctggatg aatacctcac ctgcctcctt ctatgggtca agcagaggag
601 agatttacta cacctgtgct gtaagaagct gaaaattttg ggaatgccct tccgcaatat
661 cagaagcatc ctgaaaatgg tgaacctaga ctgtatccag gaggtggaag tgaattgcaa
721 gtggatactg cccatcctga cacagtttac cccatacctg ggccacatga ggaatcttca
781 gaagctcgtt ctctcccaca tggatgtctc tcgctacgtt tccccagagc agaagaagga
841 gattgttacc cagttcacca ctcagttcct caagctgcgc tgcctccaaa agctttatat
901 gaactctgtt tctttcctcg aaggccacct ggaccagctg ctcagctgtc tgaagacctc
961 gttaaaagtc ctcacaataa ctaactgtgt gcttttggaa tcagacttga agcatctatc
1021 ccagtgcccg agtatcagtc aactaaagac cctggacctg agtggcatca gactgaccaa
1081 ttatagtctt gtgcctctcc aaattctcct agaaaaagtt gcagccaccc ttgagtacct
1141 ggatttagat gactgtggca tcatagactc ccaagtcaac gccatcctgc ctgccctgag
1201 ccgctgcttt gagctcaaca ccttcagctt ctgtggaaat cccatctgca tggccaccct
1261 ggagaacctg ctgagccaca caatcatact caaaaactta tgtgtggagc tgtatcctgc
1321 cccccgagag agttatggtg ctgatggtac tctctgctgg agcagatttg ctcaaattag
1381 ggctgagctg atgaacagag tgagggactt aaggcacccc aagaggatct tgttctgtac
1441 tgacaactgc cctgaccatg gcgacaggtc attttatgac ctggaggcag atcaatactg
1501 ctgttgaatg cctgcctatt tggatgggta tgtcaaacgc tttcttctgg acacttggaa
1561 actaaaacct aggtcttagg tacatcctaa agggagcaca gaacccatcg tttcacacat
1621 gggctctgaa agtgggaaag gaaagctgat caagcagggg caggacttgg gggaaatgtt
1681 gccatggat
//