LOCUS BC144414 3605 bp mRNA linear HUM 08-JAN-2009 DEFINITION Homo sapiens SMAD specific E3 ubiquitin protein ligase 1, mRNA (cDNA clone MGC:177952 IMAGE:9052935), complete cds. ACCESSION BC144414 VERSION BC144414.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3605) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3605) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 18 Row: E Column: 3. FEATURES Location/Qualifiers source 1..3605 /db_xref="H-InvDB:HIT000502826" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:177952 IMAGE:9052935" /tissue_type="Brain, cerebellum, PCR rescued clones" /clone_lib="NIH_MGC_310" /note="Vector: pCR4-TOPO; Clone identification sequence tag: AGACCAAA" gene 1..3605 /gene="SMURF1" /db_xref="GeneID:57154" /db_xref="HGNC:HGNC:16807" /db_xref="MIM:605568" CDS 218..2404 /gene="SMURF1" /codon_start=1 /product="SMURF1 protein" /protein_id="AAI44415.1" /db_xref="GeneID:57154" /db_xref="HGNC:HGNC:16807" /db_xref="MIM:605568" /translation="MSNPGTRRNGSSIKIRLTVLCAKNLAKKDFFRLPDPFAKIVVDG SGQCHSTDTVKNTLDPKWNQHYDLYVGKTDSITISVWNHKKIHKKQGAGFLGCVRLLS NAISRLKDTGYQRLDLCKLNPSDTDAVRGQIVVSLQTRDRIGTGGSVVDCRGLLENEG TVYEDSGPGRPLSCFMEEPAPYTDSTGAAAGGGNCRFVESPSQDQRLQAQRLRNPDVR GSLQTPQNRPHGHQSPELPEGYEQRTTVQGQVYFLHTQTGVSTWHDPRIPRDLNSVNC DELGPLPPGWEVRSTVSGRIYFVDHNNRTTQFTDPRLHHIMNHQCQLKEPSQPLPLPS EGSLEDEELPAQRYERDLVQKLKVLRHELSLQQPQAGHCRIEVSREEIFEESYRQIMK MRPKDLKKRLMVKFRGEEGLDYGGVAREGLYLLCHEMLNPYYGLFQYSTDNIYMLQIN PDSSINPDHLSYFHFVGRIMGLAVFHGHYINGGFTVPFYKQLLGKPIQLSDLESVDPE LHKSLVWILENDITPVLDHTFCVEHNAFGRILQHELKPNGRNVPVTEENKKEYVRLYV NWRFMRGIEAQFLALQKGFNELIPQHLLKPFDQKELELIIGGLDKIDLNDWKSNTRLK HCVADSNIVRWFWQAVETFDEERRARLLQFVTGSTRVPLQGFKALQGAAGPRLFTIHL IDANTDNLPKAHTCFNRIDIPPYESYEKLYEKLLTAVEETCGFAVE" BASE COUNT 938 a 911 c 967 g 789 t ORIGIN 1 ggaagcagcg agggtcagag cgccgcagca agcgccgatc tcccggctcg accatccgcc 61 tgccgcccgg acgcctgggc cgcggagttt gtgtcccggc tcggaccccg gcgcccagcc 121 cggagccgta accttgaggc ggcggcggcg gggccgggcc gggccgggct ggggggcggt 181 ggcgctggat ccgcggctgc ccgatcgttg gcgggagatg tcgaaccccg ggacacgcag 241 gaacggctcc agcatcaaga tccgtctgac agtgttatgt gccaagaacc ttgcaaagaa 301 agacttcttc aggctccctg acccttttgc aaagattgtc gtggatgggt ctgggcagtg 361 ccactcaacc gacactgtga aaaacacatt ggacccaaag tggaaccagc actatgatct 421 atatgttggg aaaacggatt cgataaccat tagcgtgtgg aaccataaga aaattcacaa 481 gaaacaggga gctggcttcc tgggctgtgt gcggctgctc tccaatgcca tcagcagatt 541 aaaagatacc ggataccagc gtttggatct atgcaaacta aacccctcag atactgatgc 601 agttcgtggc cagatagtgg tcagtttaca gacacgagac agaataggaa ccggcggctc 661 ggtggtggac tgcagaggac tgttagaaaa tgaaggaacg gtgtatgaag actccgggcc 721 tgggaggccg ctcagctgct tcatggagga accagcccct tacacagata gcaccggtgc 781 tgctgctgga ggagggaatt gcaggttcgt ggagtcccca agtcaagatc aaagacttca 841 ggcacagcgg cttcgaaacc ctgatgtgcg aggttcacta cagacgcccc agaaccgacc 901 acacggccac cagtccccgg aactgcccga aggctacgaa caaagaacaa cagtccaggg 961 ccaagtttac tttttgcata cacagactgg agttagcacg tggcacgacc ccaggatacc 1021 aagagacctt aacagtgtga actgtgatga acttggacca ctgccgccag gctgggaagt 1081 cagaagtaca gtttctggga ggatatattt tgtagatcat aataaccgaa caacccagtt 1141 tacagaccca aggttacacc acatcatgaa tcaccagtgc caactcaagg agcccagcca 1201 gccgctgcca ctgcccagtg agggctctct ggaggacgag gagcttcctg cccagagata 1261 cgaaagagat ctagtccaga agctgaaagt cctcagacac gaactgtcgc ttcagcagcc 1321 ccaagctggt cattgccgca tcgaagtgtc cagagaagaa atctttgagg agtcttaccg 1381 ccagataatg aagatgcgac cgaaagactt gaaaaaacgg ctgatggtga aattccgtgg 1441 ggaagaaggt ttggattacg gtggtgtggc cagggagggg ctttacttgc tgtgccatga 1501 aatgctgaat ccttattacg ggctcttcca gtattctacg gacaatattt acatgttgca 1561 aataaatccg gattcttcaa tcaaccccga ccacttgtct tatttccact ttgtggggcg 1621 gatcatgggg ctggctgtgt tccatggaca ctacatcaac gggggcttca cagtgccctt 1681 ctacaagcag ctgctgggga agcccatcca gctctcagat ctggaatctg tggacccaga 1741 gctgcataag agcttggtgt ggatcctaga gaacgacatc acgcctgtac tggaccacac 1801 cttctgcgtg gaacacaacg ccttcgggcg gatcctgcag catgaactga aacccaatgg 1861 cagaaatgtg ccagtcacag aggagaataa gaaagaatac gtccggttgt atgtaaactg 1921 gaggtttatg agaggaatcg aagcccagtt cttagctctg cagaaggggt tcaatgagct 1981 catccctcaa catctgctga agccttttga ccagaaggaa ctggagctga tcataggcgg 2041 cctggataaa atagacttga acgactggaa gtcgaacacg cggctgaagc actgtgtggc 2101 cgacagcaac atcgtgcggt ggttctggca agcggtggag acgttcgatg aagaaaggag 2161 ggccaggctc ctgcagtttg tgactgggtc cacgcgagtc ccgctccaag gcttcaaggc 2221 tttgcaaggc gcggcagggc cccggctgtt caccatccac ctgatagacg cgaacacaga 2281 caaccttccg aaggcccata cctgctttaa ccggatcgac attccaccat atgagtccta 2341 tgagaagctc tacgagaagc tgctgacagc cgtggaggag acctgcgggt ttgctgtgga 2401 gtgaaaagca accaaaggca acagagtcta gctcatggcc accagaccaa aagcatccag 2461 cttctgtgca cctcctgcaa agctggcaga ggccctggaa ttccagatca cctgagggga 2521 aagggttgtc tctctccttt ctgttggggg agggggatgg gggacttttg ttggtggctc 2581 ccacccatat atccctcctt taccatagta ctcccaccca cttccatcac ccatccaata 2641 aaatgcagcc aggtttagcc tttggctttg gtcacacagg atattctgct gtgttgcaac 2701 ccatgtggtg ataaggctca cagccctgag ctctttacgg gagcatcaac tcacagttag 2761 gggactgggc gtggctgatt gagggtttgg aactggtggc tatgccagct attccatctc 2821 aaaacagcct tgaggcccct tttcaatttg agcagctgct agatatctta tcagagctca 2881 gattccagat ttcacatccc agcagccggt tctgggtagc agatcaattt ccaactggaa 2941 aataactata taatgtatgc ttattggaat tctgccacag caggaagctt gagtcaaaat 3001 gtgtttcccc tttgaaagga gaaggaattg gagcagcttt tcctggaggc ccaggatatt 3061 tcttttctgg gtatcttggc tgaaaatttt gttttacata gagaaaaacg atcttttaag 3121 ggtccctttt gctgcattat ctgtccagtt tgactttttt ttcagtgaaa acaccatgtc 3181 atggagtgta ggaaagagca gaccaaaatc agccctagag ccaaccagtc agtcccaaag 3241 ctgtgacctc tgtgccactg ttgtccatag aagagcatcg actgtgtcac ttaaaatatt 3301 agtaaaccat gatgcagcaa ctgctaagag ctaaactaac aaaattgtgt catcatagct 3361 gctggcttgg tgtgaactcg cttaaaagca atggtgaaag gataacctcg atgatgtaaa 3421 tccacccaaa gatactgttc tacaaaaagt agggtgtgga cgcaaacctg tgacagcaga 3481 gggggacgac ttcacactca ctgcctcatg tggccccttt cccagtggca gctggtgaca 3541 ctaacgattg ctactcggtt cacttgccca gatgtcttca tatgatgagc aaggccagaa 3601 gcaag //