LOCUS BC144382 1564 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens PRR5-ARHGAP8 fusion, mRNA (cDNA clone MGC:177920
IMAGE:9052903), complete cds.
ACCESSION BC144382
VERSION BC144382.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1564)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1564)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 17 Row: P Column: 22.
FEATURES Location/Qualifiers
source 1..1564
/db_xref="H-InvDB:HIT000502794"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177920 IMAGE:9052903"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_310"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: TTTTCTCA"
gene 1..1564
/gene="LOC553158"
/gene_synonym="ARHGAP8"
/db_xref="GeneID:553158"
CDS 54..1514
/gene="LOC553158"
/gene_synonym="ARHGAP8"
/codon_start=1
/product="LOC553158 protein"
/protein_id="AAI44383.1"
/db_xref="GeneID:553158"
/translation="MVILRDKIRFYEELQRDKAAAAAVLGAVRKRPSVVPMAGQDPAL
STSHPFYDVARHGILQVAGDDRFGRRVVTFSCCRMPPSHELDHQRLLEYLKYTLDQYV
ENDYTIVYFHYGLNSRNKPSLGWLQSAYKEFDRKYKKNLKALYVVHPTSFIKVLWNIL
KPLISHKFGKKVIYFNYLSELHEHLKYDQLVIPPEVLRYDEKLQSLHEGRTPPPTKTP
PPRPPLPTQQFGVSLQYLKDKNQGELIPPVLRFTVTYLREKGLRTEGLFRRSASVQTV
REIQRLYNQGKPVNFDDYGDIHIPAVILKTFLRELPQPLLTFQAYEQILGITSLPLAP
LELSREPHALPGVESSLRVTGCRQILRSLPEHNYVVLRYLMGFLHAVSRESIFNKMNS
SNLACVFGLNLIWPSQGVSSLSALVPLNMFTELLIEYYEKIFSTPEAPGEHGLAPWEQ
GSRAAPLQEAVPRTQATGLTKPTLPPSPLMAARRRL"
BASE COUNT 343 a 489 c 428 g 304 t
ORIGIN
1 agctggggtc cttcttcacg gagtacctgc agaaccagct gctgacaaaa ggcatggtga
61 tccttcggga caagattcgc ttctatgagg agctgcagag agacaaggcg gcggcggctg
121 ctgtgctggg tgcagtgagg aagaggccct cggtggtgcc catggctggc caggatcctg
181 cgctgagcac gagtcacccg ttctacgacg tggccagaca tggcattctg caggtggcag
241 gggatgaccg ctttggaaga cgtgttgtca cgttcagctg ctgccggatg ccgccctccc
301 acgagctgga ccaccagcgg ctgctggagt atttgaagta cacactggac caatacgttg
361 agaacgatta taccatcgtc tatttccact acgggctgaa cagccggaac aagccttccc
421 tgggctggct ccagagcgca tacaaggagt tcgataggaa gtacaagaag aacttgaagg
481 ccctctacgt ggtgcacccc accagcttca tcaaggtcct gtggaacatc ttgaagcccc
541 tcatcagtca caagtttggg aagaaagtca tctatttcaa ctacctgagt gagctccacg
601 aacaccttaa atacgaccag ctggtcatcc ctcccgaagt tttgcggtac gatgagaagc
661 tccagagcct gcacgagggc cggacgccgc ctcccaccaa gacaccaccg ccgcggcccc
721 cgctgcccac acagcagttt ggcgtcagtc tgcaatacct caaagacaaa aatcaaggcg
781 aactcatccc ccctgtgctg aggttcacag tgacgtacct gagagagaaa ggcctgcgca
841 ccgagggcct gttccggaga tccgccagcg tgcagaccgt ccgcgagatc cagaggctct
901 acaaccaagg gaagcccgtg aactttgacg actacgggga cattcacatc cctgccgtga
961 tcctgaagac cttcctgcga gagctgcccc agccgcttct gaccttccag gcctacgagc
1021 agattctcgg gatcacctcg ctgcccctgg cccctctgga gctcagcagg gagccccatg
1081 cccttccagg tgtggagagc agcctgcgtg tcactggctg ccgccagatc ttacggagcc
1141 tcccagagca caactacgtc gtcctccgct acctcatggg cttcctgcat gcggtgtccc
1201 gggagagcat cttcaacaaa atgaacagct ctaacctggc ctgtgtcttc gggctgaatt
1261 tgatctggcc atcccagggg gtctcctccc tgagtgccct tgtgcccctg aacatgttca
1321 ctgaactgct gatcgagtac tatgaaaaga tcttcagcac cccggaggca cctggggagc
1381 acggcctggc accatgggaa caggggagca gggcagcccc tttgcaggag gctgtgccac
1441 ggacacaagc cacgggcctc accaagccta ccctacctcc gagtcccctg atggcagcca
1501 gaagacgtct ctagtgttgc gaacactctg tatgtttcga gctacctccc acacctgtct
1561 gtgc
//