LOCUS BC144348 1533 bp mRNA linear HTC 02-JAN-2009
DEFINITION Homo sapiens cDNA clone IMAGE:9052868, with apparent retained
intron.
ACCESSION BC144348
VERSION BC144348.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1533)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1533)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 17 Row: L Column: 2
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..1533
/db_xref="H-InvDB:HIT000502765"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:9052868"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TCTGCCAG"
BASE COUNT 412 a 373 c 368 g 380 t
ORIGIN
1 cgggcaaccc ttgagttttc gcctctgtcc tgtcccccga actgacaggt gctcccagca
61 acttgctggg gacttctcgc cgctcccccg cgtccccacc ccctcattcc tccctcgcct
121 tcacccccac ccccaccact tcgccacagc tcaggatttg tttaaacctt gggaaactgg
181 ttcaggtcca ggttttgctt tgatcctttt caaaaactgg agacacagaa gagggctcta
241 ggaaaaagtt ttggatggga ttatgtggaa actaccctgc gattctctgc tgccagagca
301 ggctcggcgc ttccacccca gtgcagcctt cccctggcgg tggtgaaaga gactcgggag
361 tcgctgcttc caaagtgccc gccgtgagtg agctctcacc ccagtcagcc aaatgagcct
421 cttcgggctt ctcctgctga catctgccct ggccggccag agacagggga ctcaggcgga
481 atccaacctg agtagtaaat tccagttttc cagcaacaag gaacagaacg gtaggaacta
541 tatccaagca tctggactgg catagaaaag aggagaaaga acatttaaaa ggagtacaag
601 atcctcagca tgagagaatt attactgtgt ctactaatgg aagtattcac agcccaaggt
661 ttcctcatac ttatccaaga aatacggtct tggtatggag attagtagca gtagaggaaa
721 atgtatggat acaacttacg tttgatgaaa gatttgggct tgaagaccca gaagatgaca
781 tatgcaagta tgattttgta gaagttgagg aacccagtga tggaactata ttagggcgct
841 ggtgtggttc tggtactgta ccaggaaaac agatttctaa aggaaatcaa attaggataa
901 gatttgtatc tgatgaatat tttccttctg aaccagggtt ctgcatccac tacaacattg
961 tcatgccaca attcacagaa gctgtgagtc cttcagtgct acccccttca gctttgccac
1021 tggacctgct taataatgct ataactgcct ttagtacctt ggaagacctt attcgatatc
1081 ttgaaccaga gagatggcag ttggacttag aagatctata taggccaact tggcaacttc
1141 ttggcaaggc ttttgttttt ggaagaaaat ccagagtggt ggatctgaac cttctaacag
1201 aggaggtaag attatacagc tgcacacctc gtaacttctc agtgtccata agggaagaac
1261 taaagagaac cgataccatt ttctggccag gttgtctcct ggttaaacgc tgtggtggga
1321 actgtgcctg ttgtctccac aattgcaatg aatgtcaatg tgtcccaagc aaagttacta
1381 aaaaatacca cgaggtcctt cagttgagac caaagaccgg tgtcagggga ttgcacaaat
1441 cactcaccga cgtggccctg gagcaccatg aggagtgtga ctgtgtgtgc agagggagca
1501 caggaggata gccgcatcac caccagcagc tct
//