LOCUS BC144341 4361 bp mRNA linear HTC 02-JAN-2009
DEFINITION Homo sapiens cDNA clone IMAGE:9052861, with apparent retained
intron.
ACCESSION BC144341
VERSION BC144341.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4361)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4361)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 17 Row: H Column: 24
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..4361
/db_xref="H-InvDB:HIT000502761"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:9052861"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_364"
/lab_host="DH10B"
/note="Vector: pCR-XL-TOPO with reversed insert; Clone
identification sequence tag: GCCATAAG"
BASE COUNT 1060 a 1238 c 1249 g 814 t
ORIGIN
1 cggagacgga aagtttggga gcccgagcag gctcggctgc agcctcgggg agggggtcca
61 gcgggtggcg gccctgggga tggggaagga gcaggagctg ctggaggcgg cccgcaccgg
121 gcacctcccg gcggtggaga agctgctgtc cgggaagcgg ctctcctcag gctttggggg
181 cggcggcggc ggtggctctg ggggcggcgg cggcggcagc ggcggcggcg gcggcggcct
241 cggctcttcc agccaccccc tctccagtct gctcagcatg tggagagggc caaatgtgaa
301 ctgtgttgac agcactggct acacacccct gcaccatgct gctttgaatg gccataagga
361 tgtggtcgag gttcttctga ggaacgatgc gctgaccaac gtggctgact caaaaggctg
421 ctaccctctg catttggcag cctggaaagg agatgcccag atagtgcggt tgctcatcca
481 tcaagggcct tcacacacca gagtcaatga acagaacaat gacaacgaga cagccctgca
541 ttgtgcagcg cagtatggcc acacagaggt ggtgaaggtg ctcttagagg agctgacgga
601 ccccaccatg cgcaacaaca aattcgagac ccctttggac ctggcagcac tgtatgggcg
661 actggaggtg gtgaaaatgc tccttaatgc acaccccaac ctcctgagct gcaacactaa
721 gaagcacacc cctctgcact tggcagcaag gaatggccac aaagccgtgg tccaggtcct
781 cctcgatgct ggcatggaca gcaactacca gacggagatg ggcagtgctt tgcatgaggc
841 tgctttgttt ggcaagaccg atgtggtgca aatcctgctg gctgcaggaa ctgacgtcaa
901 cataaaagat aaccatggac tgactgccct agacactgtt cgggaactgc cttctcaaaa
961 gagccagcaa atagcagcat taattgaaga tcacatgact ggaaaaagaa gtacaaaaga
1021 agtagataaa acccccccac cccagccacc tctcatctcc agtatggact ccatatcaca
1081 gaagtctcag ggtgacgtgg agaaagcagt gactgaactg attatagatt ttgatgcaaa
1141 tgctgaagaa gagggtccct acgaagctct gtataatgcc atctcctgcc attcgttgga
1201 cagcatggcc agcgggcgat catctgacca agactccacg aacaaggagg ctgaggcagc
1261 aggagtgaaa cctgctggag tgaggcctag ggaacgtcca ccacctccag caaagccacc
1321 gcccgatgaa gaggaagaag accacataga taagaagtat tttcccttga cagcttctga
1381 ggttctgtcc atgagaccta ggattcatgg gagtgcagcc cgggaagaag acgaacaccc
1441 ttatgaactg ttgttaacag cagagacaaa gaaagtggtg ttggtggatg gaaaaacaaa
1501 agatttctga caattttgat caagaaagag gaaaaaaccg ctacatatga agatgctata
1561 aagaatattg ttggccgggc atggtggctc atgcctgtaa tcccagcact ttgggacccc
1621 aagaccacag gcggagcagc agcagccgga gccaggactc tgcggagggg caggacgggc
1681 aggtcccaga gcagttctca ggcctcctcc acggctcctc cccggtgtgc gaggtggggc
1741 aggacccttt ccagctgctc tgtaccgctg gccagagcca tccagacggg tccccccagc
1801 agggcgcctg ccacaaggcc agcatgcagc tggaggagac gggtgtgcat gctcctggag
1861 cctcccagcc cagtgccctg gaccagagca agagagtggg ctacctcaca ggcctgccca
1921 ccaccaacag cggctcgcac cctgaaactt tgactcacac agcatctccg caccctggtg
1981 gtgctgagga aggagaccgg agtggggcca ggagccgagc gcctcccact agcaaaccca
2041 aagctgaact caaactcagc cgcagcttgt ccaagtctga ctctgatctc ctgacctgct
2101 cacccacaga ggacgctacc atggggagtc ggagtgagtc cttatccaac tgcagcattg
2161 ggaagaaaag gctagagaag tcaccctcct tcgcctcgga gtgggatgag attgagaaaa
2221 tcatgagttc tattggagaa gggattgact tttctcagga acggcagaag atctcaggtt
2281 cacggacgct ggagcagagt gtcggggagt ggctggagtc gattgggctg cagcagtatg
2341 agagcaagtt gcttctgaat ggctttgacg atgtccactt cctggggtct aatgtgatgg
2401 aagagcagga cctgcgggac atcggcatca gcgacccaca gcaccggcgg aagctgctcc
2461 aggcggcacg ctccctaccc aaggtgaagg ctctgggtta tgacgggaac agccccccta
2521 gcgtgccctc ctggctggac tccctggggc tgcaggacta cgtccattcc ttcttgtcaa
2581 gtggttacag ctccattgac accgtgaaga acctctggga gctagagctc gtcaatgtcc
2641 tgaaggtcca gctgctcggc catcgcaagc gcatcatcgc ctccctcgca gacagaccgt
2701 acgaggagcc gccccagaag ccccccagat tctcccagct gaggtgccaa gatttgctct
2761 cccagacgtc atccccactg agtcagaatg attcctgcac tgggcggtcg gcagatctgc
2821 tgctgcctcc aggggacaca ggcaggaggc gccatgacag tctccatgac cctgcggcac
2881 cctcccgagc ggagcgcttc aggatccagg aggagcaccg tgaggccaag ctgaccctgc
2941 ggcccccaag cctggcagcc ccctacgccc cagtgcagag ttggcaacac cagccagaga
3001 aactcatctt cgagtcctgt ggttatgaag ccaattatct gggctccatg ctgatcaaag
3061 atctgcgagg gacagaatcc acgcaagacg cctgtgccaa gatgcggaaa tctacggagc
3121 acatgaagaa gatccccacc atcatcctgt ccatcacata caaaggtgtc aagttcatcg
3181 atgcctccaa caagcagaac gtcattgcag agcacgagat ccggaacatt tcctgtgcgg
3241 cccaggaccc ggaggacctc tgtacctttg cctacatcac caaggacctg cagaccagcc
3301 accactattg ccatgtgttc agcaccgtgg atgtgaacct gacctacgag atcatcctga
3361 cgctggggca ggccttcgaa gtggcctatc agttggccct gcaggcccag aagtccaggg
3421 cgacgggcgc ctctgcagct gagatgattg aaacaaaatc ttccaaaccg gtgcctaagc
3481 ctcgggtcgg cgtgaggaaa tccgcactgg aaccacctga tatggaccaa gatgcccaat
3541 cccatgccag tgtctcctgg gttgtggacc ccaaaccaga ctctaagcgg agcctcagca
3601 ccaactgagc cactgaggaa ccacactgtg ctgcggaaac atagacgtgg gggcataggc
3661 tcccgctgcc accaccgcca tcgcctcacc tgcagctctg aagacccagg cctcacctcc
3721 gcctgcagga cctcctcttg gccacttggc ctgggcctgc caccaccacg tcctgcagaa
3781 cgagccctgc cttggctgtg gagaagcact ccaggccgct agcagatggg actggcattc
3841 cagagggtca agaagtgact tgttcagaac acattgtttt taacagaaaa aaaatctttt
3901 tataaaatga acttttaaca cttggctcaa acctctaggt catactgcca atctttagac
3961 aaatggccat ggggcagagg acaggggagc tgaggttggt tcagaggcca gcctgcatag
4021 cctctgtcct caggacggaa cttgggtgca gctcagtggg tcggaagaga aggcggtggc
4081 ctgtgggtga ggggaacgga gcaggctcag gcagaattga gtacggtgcg tctgcttttc
4141 aaacccaacc atatcagctg ctgctcttta tgaactgccc aacttcctgt ccctttcagg
4201 ggctagacac aggcttctcg taagaacaca gccttagagg cacctgagca actcaaaggt
4261 ttccggtcca tttctggggt tcccgatggg aaggttcagt ggccaaatga agataagtgt
4321 gcagtttcta gtgctgggaa gtcttagcca gcaccagagc g
//