LOCUS BC144302 5390 bp mRNA linear HTC 02-JAN-2009 DEFINITION Homo sapiens cDNA clone IMAGE:9052822, with apparent retained intron. ACCESSION BC144302 VERSION BC144302.1 KEYWORDS HTC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5390) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5390) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 17 Row: D Column: 8 This clone has the following problem: retained intron. FEATURES Location/Qualifiers source 1..5390 /db_xref="H-InvDB:HIT000502725" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:9052822" /tissue_type="Pooled, cerebellum, kidney, placenta, testis, lung, colon, liver, heart, thyroid, bladder, uterus, PCR rescued clones" /clone_lib="NIH_MGC_364" /lab_host="DH10B" /note="Vector: pCR-XL-TOPO with reversed insert; Clone identification sequence tag: GTAGTGTT" BASE COUNT 1643 a 1176 c 1238 g 1333 t ORIGIN 1 ttttgctctc tgggattggt ttcttaaaga atctggatcc tttttaatat gtcaaaatga 61 gtctgctgat gtttacacaa ctactgctct gtggattttt atatgttcgg gttgatggat 121 cgcgtcttcg ccaggaggac tttcccccgc ggattgtgga gcatccttcc gatgtcatcg 181 tctctaaggg cgagcccacg actctgaact gcaaggcgga gggccggcca acgcccacca 241 ttgagtggta caaagatggg gagcgagtgg agactgacaa ggacgatccc cggtcccaca 301 ggatgcttct gcccagcgga tccttattct tcttgcgcat cgtgcacggg cgcaggagta 361 aacctgatga aggaagctac gtttgtgttg cgaggaacta tcttggtgaa gcagtgagtc 421 gaaatgcgtc tctggaagtg gcattgttac gagatgactt ccgacaaaac cccacagatg 481 ttgtagtggc agctggagag cctgcaatcc tggagtgcca gcctccccgg ggacacccag 541 aacccaccat ctactggaaa aaagacaaag ttcgaattga tgacaaggaa gaaagaataa 601 gtatccgtgg tggaaaactg atgatctcca ataccaggaa aagtgatgca gggatgtata 661 cttgtgttgg taccaatatg gtgggagaaa gggacagtga cccagcagag ctgactgtct 721 ttgaacgacc cacatttctc aggaggccaa ttaaccaggt ggtactggag gaagaagctg 781 tagaatttcg ttgtcaagtc caaggagatc ctcaaccaac tgtgaggtgg aaaaaggatg 841 atgcagactt gccaagagga aggtatgaca tcaaagacga ttacacacta agaattaaaa 901 agaccatgag tacagatgaa ggcacctata tgtgtattgc tgagaatcgg gttggaaaaa 961 tggaagcctc tgctacactc accgtccgag ctcccccaca gtttgtggtt cggccaagag 1021 atcagattgt tgctcaaggt cgaacagtga catttccctg tgaaactaaa ggaaacccac 1081 agccagctgt tttttggcag aaagaaggca gccagaacct acttttccca aaccaacccc 1141 agcagcccaa cagtagatgc tcagtgtcac caactggaga cctcacaatc accaacattc 1201 aacgttccga cgcgggttac tacatctgcc aggctttaac tgtggcagga agcattttag 1261 caaaagctca actggaggtt actgatgttt tgacagatag acctccacct ataattctac 1321 aaggcccagc caaccaaacg ctggcagtgg atggtacagc gttactgaaa tgtaaagcca 1381 ctggtgatcc tcttcctgta attagctggt taaaggaggg atttactttt ccgggtagag 1441 atccaagagc aacaattcaa gagcaaggca cactgcagat taagaattta cggatttctg 1501 atactggcac ttatacttgt gtggctacaa gttcaagtgg agagacttcc tggagtgcag 1561 tgctggatgt gacagagtct ggagcaacaa tcagtaaaaa ctatgattta agtgacctgc 1621 cagggccacc atccaaaccg caggtcactg atgttactaa gaacagtgtc accttgtcct 1681 ggcagccagg tacccctgga acccttccag caagtgcata tatcattgag gctttcagat 1741 atgtagttta gaaggctcag ttataatatt gcatgtggaa atgatgcaaa agaaaacaca 1801 ccttgtaaca ggaaaatgta ttggcattta ctctgtagtc catttattct ttctacaggt 1861 taattctttt caagccaatc agtgagcaac agctggcaga ccgtggcaaa ccatgtaaag 1921 accaccctct atactgtaag aggactgcgg cccaatacaa tctacttatt catggtcaga 1981 gcgatcaacc cccaaggtct cagtgaccca agtcccatgt cagatcctgt gcgcacacaa 2041 gatatcagcc caccagcaca aggagtggac cacaggcaag tgcagaaaga gctaggagat 2101 gtccttgtcc gtcttcataa tccagttgtg ctgactccca ccacggttca ggtcacatgg 2161 acggttgatc gccaacccca gtttatccaa ggctaccgag tgatgtatcg tcagacttca 2221 ggtctgcagg cgacatcttc gtggcagaat ttagatgcca aagtcccgac tgaacgaagt 2281 gctgtcttag tcaacctgaa aaagggggtg acttatgaaa ttaaagtacg gccatatttt 2341 aatgagttcc aaggaatgga tagtgaatct aaaacggttc gtactactga agaagcccca 2401 agtgccccac cacagtctgt cactgtactg acagttggaa gctacaatag cacaagtatt 2461 agtgtttcct gggatcctcc tcctccagat caccagaatg gaattatcca agaatacaag 2521 atctggtgtc taggaaatga aacgcgattc catatcaaca aaactgtgga tgcagccatt 2581 cggtccgtaa taattggtgg attattccca ggtattcaat accgggtaga ggttgcagct 2641 agtaccagtg caggggttgg agtaaagagt gagccacagc caataataat cgggagacgc 2701 aatgaagttg tcattactga aaacaataac agcataactg agcaaatcac tgatgtggtg 2761 aagcaaccag cctttatagc tggtattggt ggtgcctgct gggtaattct gatgggtttt 2821 agcatatggt tgtattggcg aagaaagaag aggaagggac tcagtaatta tgctgttacg 2881 tttcaaagag gagatggagg actaatgagc aatggaagcc gtccaggtct tctcaatgct 2941 ggtgatccca gctatccatg gcttgctgat tcttggccag ccacgagctt gccagtaaat 3001 aatagcaaca gtggcccaaa tgagattgga aattttggcc gtggagatgt gctgccacca 3061 gttccaggcc aaggggataa aacagcaacg atgctctcag atggagccat ttatagtagc 3121 attgacttca ctaccaaaac cagttacaac agttccagcc aaataacaca ggctacccca 3181 tatgccacga cacagatctt gcattccaac agcatacatg aattggctgt cgatctgcct 3241 gatccacaat ggaaaagctc aattcagcaa aaaacagatc tgatgggatt tggttattct 3301 ctacctgatc agaacaaagg taacaatggt gggaaaggtg gaaaaaagaa gaaaaataaa 3361 aactcttcta aaccacagaa aaacaatgga tccacttggg ccaatgtccc tctacctccc 3421 cccccagtcc agccccttcc tggcacggag ctggaacact atgcagtgga acaacaagaa 3481 aatggctatg acagtgatag ctggtgccca ccattgccag tacaaactta cttacaccaa 3541 ggtctggaag atgaactgga agaagatgat gatagggtcc caacacctcc tgttcgaggc 3601 gtggcttctt ctcctgctat ctcctttgga cagcagtcca ctgcaactct tactccatcc 3661 ccacgggaag agatgcaacc catgctgcag gctcacctgg atgagttgac aagagcctat 3721 cagtttgata tagcaaaaca aacatggcac attcaaagca ataatcaacc tccacagcct 3781 ccagttccac cgttaggtta tgtgtctgga gccttgattt ctgatttgga aacggatgtt 3841 gcagatgatg atgccgacga cgaagaggaa gctttagaaa tccccaggcc cctgagagca 3901 ctggaccaga ctcctggatc cagcatggac aatctagaca gctctgtgac aggaaaagcc 3961 tttacctcct ctcaaagacc tcgacctacc agcccatttt ctactgacag taacaccagt 4021 gcagccctga gtcaaagtca gaggcctcgg cccactaaaa aacacaaggg agggcggatg 4081 gaccaacaac cagcattgcc tcatcgaagg gaaggaatga cagatgagga ggccttggtg 4141 ccctatagca agcccagttt cccatctcca ggtggccaca gctcatcagg aacagcttct 4201 tctaagggat ccactggacc taggaaaacc gaggtgttga gagcaggcca ccagcgcaat 4261 gccagcgacc ttcttgacat aggatatatg ggctccaaca gtcaaggaca gtttacaggt 4321 gaattatagt aaatgagagg agacatacaa agctgctctg aaggaccatc aggtccggac 4381 tcatggaagt gatgactcta aacagtgcaa tgaacaattt atttatgtac tattaaaaga 4441 actgtaaatg caatgtaaag acacacagcc acacatatcc cacagatatt ttcattgtgt 4501 tcttctctta agtacaccac ccaccttaac tctttcttgt caggagtata taaaaaagaa 4561 agaaaacaaa actcgcccta caggaagaaa aggattctcc tctgtatata atttcttttg 4621 tgcattgcta tgcaagctca ctctttttag ctctgctcat attattgtct gttcttattg 4681 gtctgttgta ctatatgtga attaataggc tgtggtgcca tatattaact tttaattgtg 4741 taacttttat gtttaaattt tgcactgcaa ttttatttgg tgataagcac aaatctctac 4801 tcctcatgac atgaagaaaa agactgaatg tgaagggagt ttctgtactg taagctagat 4861 tggataatga tggctgtaac aaatcatgtt agatggtttt cagttggggt gtagaaatag 4921 gaagatgcaa aggaacaatg gtgttggcaa agtcttcttt gaatatcagg gactgagtca 4981 ataaaaaaaa tagtagaaag gtggctttta ctattgacaa aagccggggt caaaaaaagt 5041 agtttaagtc ttaagactga atatgcatta aagtatgcag gtagcaaaga tgtaataaat 5101 ttgcttaaaa aaagaaatta aagttttatt tagaatcaat tttacctgtc attgtaattg 5161 acccatctga gaattacaat aagcaagagg aaattaaggt gttttgcaag agctgtattt 5221 atattacagt tttttaaaaa cattttctga attatcgtaa ttaagctctc caactcgtta 5281 agtcagaata taatatgaag ttccccaagg aaacgaacaa aatgaactct agaatatcta 5341 gcaaatagtt aaagaagcaa tttattatta gggcatactc gggctgtttc //