LOCUS BC144301 4656 bp mRNA linear HUM 08-JAN-2009 DEFINITION Homo sapiens fibronectin type III domain containing 3A, mRNA (cDNA clone MGC:177838 IMAGE:9052821), complete cds. ACCESSION BC144301 VERSION BC144301.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 4656) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4656) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Ambion cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 17 Row: F Column: 14. FEATURES Location/Qualifiers source 1..4656 /db_xref="H-InvDB:HIT000502724" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:177838 IMAGE:9052821" /tissue_type="Brain, PCR rescued clones" /clone_lib="NIH_MGC_308" /note="Vector: pCR-XL-TOPO; Clone identification sequence tag: CTTGCATT" gene 1..4656 /gene="FNDC3A" /gene_synonym="bA203I16.1" /gene_synonym="bA203I16.5" /gene_synonym="HUGO" /gene_synonym="RP11-203I16.5" /db_xref="GeneID:22862" /db_xref="HGNC:HGNC:20296" CDS 74..3670 /gene="FNDC3A" /gene_synonym="bA203I16.1" /gene_synonym="bA203I16.5" /gene_synonym="HUGO" /gene_synonym="RP11-203I16.5" /codon_start=1 /product="FNDC3A protein" /protein_id="AAI44302.1" /db_xref="GeneID:22862" /db_xref="HGNC:HGNC:20296" /translation="MAEHPPLLDTTQILSSDISLLSAPIVSADGTQQVILVQVNPGEA FTIRREDGQFQCITGPAQVPMMSPNGSVPPIYVPPGYAPQVIEDNGVRRVVVVPQAPE FHPGSHTVLHRSPHPPLPGFIPVPTMMPPPPRHMYSPVTGAGDMTTQYMPQYQSSQVY GDVDAHSTHGRSNFRDERSSKTYERLQKKLKDRQGTQKDKMSSPPSSPQKCPSPINEH NGLIKGQIAGGINTGSAKIKSGKGKGGTQVDTEIEEKDEETKAFEALLSNIVKPVASD IQARTVVLTWSPPSSLINGETDESSVPELYGYEVLISSTGKDGKYKSVYVGEETNITL NDLKPAMDYHAKVQAEYNSIKGTPSEAEIFTTLSCEPDIPNPPRIANRTKNSLTLQWK APSDNGSKIQNFVLEWDEGKGNGEFCQCYMGSQKQFKITKLSPAMGCKFRLSARNDYG TSGFSEEVLYYTSGCAPSMPASPVLTKAGITWLSLQWSKPSGTPSDEGISYILEMEEE TSGYGFKPKYDGEDLAYTVKNLRRSTKYKFKVIAYNSEGKSNPSEVVEFTTCPDKPGI PVKPSVKGKIHSHSFKITWDPPKDNGGATINKYVVEMAEGSNGNKWEMIYSGATREHL CDRLNPGCFYRLRVYCISDGGQSAVSESLLVQTPAVPPGPCLPPRLQGRPKAKEIQLR WGPPLVDGGSPISCYSVEMSPIEKDEPREVYQGSEVECTVSSLLPGKTYSFRLRAANK MGFGPFSEKCDITTAPGPPDQCKPPQVTCRSATCAQVNWEVPLSNGTDVTEYRLEWGG VEGSMQICYCGPGLSYEIKGLSPATTYYCRVQALSVVGAGPFSEVVACVTPPSVPGIV TCLQEISDDEIENPHYSPSTCLAISWEKPCDHGSEILAYSIDFGDKQSLTVGKVTSYI INNLQPDTTYRIRIQALNSLGAGPFSHMIKLKTKPLPPDPPRLECVAFSHQNLKLKWG EGTPKTLSTDSIQYHLQMEDKNGRFVSLYRGPCHTYKVQRLNESTSYKFCIQACNEAG EGPLSQEYIFTTPKSVPAALKAPKIEKVNDHICEITWECLQPMKGDPVIYSLQVMLGK DSEFKQIYKGPDSSFRYSSLQLNCEYRFRVCAIRQCQDSLGHQDLVGPYSTTVLFISQ RTEPPASTNRDTVESTRTRRALSDEQCAAVILVLFAFFSILIAFIIQYFVIK" BASE COUNT 1474 a 933 c 942 g 1307 t ORIGIN 1 ttgacacggc tttggaaacg acgtcatgtg ttagaattgg agcgttattc agtatattaa 61 tgtcttattg ataatggcag aacatccacc actactggat acaactcaga tcttaagtag 121 tgatatttct cttttgtctg cccctattgt aagtgcagat ggaacacaac aggttattct 181 ggtacaagtt aacccaggag aagcatttac aataagaaga gaagatggac agtttcagtg 241 cattacaggt cctgctcagg ttccaatgat gtccccaaat ggttctgtgc ctcctatcta 301 tgtgcctcct ggatatgccc cacaggttat tgaagacaat ggtgttcgaa gagttgtcgt 361 ggtccctcag gcaccagagt ttcaccctgg tagtcacaca gttctccacc gttctccaca 421 tcctcctcta cctggtttca ttcctgtccc aactatgatg ccgcctccac cacgtcatat 481 gtactcaccc gtgactggag ctggagacat gacaacacag tatatgccac agtatcagtc 541 ttcacaagtc tatggagatg tagatgctca ctctacacat ggaaggtcca actttagaga 601 tgaacgatct agtaaaacat atgaacgttt gcagaaaaaa ttgaaggatc gccaaggaac 661 acagaaagat aaaatgagca gtccaccatc atcaccccag aaatgccctt ctcccattaa 721 tgaacataat ggacttataa aaggacaaat tgctggtggt ataaacacag gatcagcaaa 781 aatcaagtct gggaagggga aaggtggtac acaagttgat acagaaattg aagaaaaaga 841 tgaagaaact aaagcatttg aagcacttct ttccaacatt gtcaaaccag tggcctccga 901 catccaggca aggacagtag tacttacctg gtcaccacct tccagcctca ttaatggtga 961 aacagatgaa agtagtgtac cagagctcta tggttatgaa gttctgatct caagtactgg 1021 aaaagatggg aaatacaaaa gtgtatatgt aggagaagaa acaaatatca ctttaaatga 1081 tctcaagcca gccatggatt accatgcaaa agtccaggca gaatataatt ctataaaggg 1141 aactccttca gaggctgaaa tctttaccac cttgagctgt gaacctgata tacctaatcc 1201 accaaggata gccaatcgga ccaaaaattc actcactttg caatggaagg cacctagtga 1261 caatggttct aaaatccaaa actttgtatt agaatgggat gaaggaaaag gaaatggaga 1321 attttgtcag tgttacatgg gctcacagaa acaatttaaa attactaaac tttcaccagc 1381 aatgggctgt aaattcagac tatcggccag aaatgactat ggtacaagtg gttttagtga 1441 agaagtctta tattacacct caggctgtgc tccttctatg ccagcaagtc ctgtattaac 1501 caaggctgga attacttggt tatccttaca atggagtaag ccctcaggaa caccatcaga 1561 tgaaggaatt tcttacattt tagagatgga ggaagaaact tcaggatatg gttttaagcc 1621 taaatatgat ggagaagatc ttgcttacac agtgaaaaat ctcagacgta gtactaagta 1681 taaatttaag gttattgctt acaactcaga aggtaaaagt aatccaagtg aagtagtaga 1741 atttactact tgccctgata aaccaggcat acctgtaaag ccttcagtga aaggaaagat 1801 acattcacac agttttaaaa taacctggga tccaccaaaa gacaatggcg gagcaaccat 1861 caataaatat gtagtggaga tggcagaagg ttctaacgga aacaaatggg aaatgatata 1921 cagtggtgct accagggaac atctttgtga tcgactgaat ccaggctgtt tctatcgttt 1981 acgagtttac tgcatcagtg atggaggaca gagtgcggtc tctgaatctt tacttgtgca 2041 gactccagct gtgcctcctg gcccatgcct ccctcccaga ttacagggta gacccaaagc 2101 aaaagaaata cagttacgat ggggaccccc tctggttgat ggtggatcac ccatttcctg 2161 ttacagtgtg gaaatgtctc ctatagaaaa agatgaacct agagaagttt accaaggttc 2221 tgaagtagaa tgtacagtga gcagccttct tcctggaaag acatacagct tcagactacg 2281 tgcagctaac aaaatggggt ttggaccatt ttcagaaaaa tgtgatatta ctacagcccc 2341 tgggccacca gatcagtgca agccccctca agtgacatgt agatctgcaa cttgtgcaca 2401 agtgaattgg gaggttcctt tgagtaatgg aacagatgtc actgaatatc gactggagtg 2461 gggaggagtt gaaggaagta tgcagatatg ttactgtggg cctggtctca gttatgaaat 2521 aaaaggactt tcaccagcaa ctacctatta ttgcagggtc caggctctga gtgttgtggg 2581 tgcaggccct ttcagtgaag tagtagcctg tgtgactcca ccatcagttc ctggcattgt 2641 gacctgtctt caagaaataa gcgatgatga gatagaaaat ccccattatt caccttctac 2701 atgccttgca ataagctggg aaaagccttg tgatcatggt tcggaaatcc ttgcctacag 2761 catagacttt ggagataaac aatccctaac agtgggaaag gttacaagct atattatcaa 2821 caatttgcaa ccagatacaa catacagaat acgaattcaa gccttgaata gccttggagc 2881 tggtcctttc agccatatga taaaattaaa aactaagcct ctccctcctg atccacctcg 2941 tctggaatgt gttgccttta gccaccagaa ccttaagctg aaatggggag aaggaactcc 3001 aaagacattg tcaaccgatt ctattcagta ccaccttcag atggaggata agaatggacg 3061 gtttgtatcc ctatacagag gaccatgtca tacatacaaa gtacaaagac ttaatgagtc 3121 aacatcctat aaattctgta ttcaagcttg taatgaagct ggggaaggtc ccctctccca 3181 agaatatatt ttcactactc caaaatctgt cccagctgcc ttgaaagccc ccaaaataga 3241 gaaagtaaat gatcacattt gtgaaattac atgggagtgt ttacagccaa tgaaaggtga 3301 tccagttatt tacagtcttc aagttatgtt gggaaaagat tcagaattca aacagattta 3361 caagggtccc gactcttcct tccggtattc cagccttcag ctgaactgtg aatatcgctt 3421 ccgtgtatgt gccattcgcc agtgccaaga ctctctggga caccaggacc tcgtaggtcc 3481 ctacagcacc acagtgctct tcatctctca gaggactgaa ccaccagcca gcaccaacag 3541 agacactgtg gaaagcacaa ggacccgacg ggcactgagt gacgagcagt gtgctgccgt 3601 catccttgtg ctgtttgctt tcttttccat tttgattgcc tttatcattc agtactttgt 3661 aatcaagtga aaatataact ttatttttta actctattac attttatttt gtcatgtact 3721 aaaattattt ctgtattgct tttataaaaa acagtggcat ttagcactgg cattgagact 3781 atagcacatc atttttgcca ttttcagtgc ttatattgtt aggtagaggc tggcacttta 3841 ttagaatgca agccacaaaa atatcaattt tgtttttttt gttagggtgg gtcttctttt 3901 tttctttccc tctctctttt tttaacaaat gccttcttat agaaaaactt tctaagaggc 3961 aacaatttag aatggatatt ttgacgaatc ggcatgagtg taacagtgat aacctgatct 4021 gtttgtttta aagattatta ccaagtgaaa aattcagaat gaatagaatt tacactaaca 4081 tgctatataa aatgttaaag tctgatgctg tgaaagcaat ctagtgctat atttctacct 4141 cctcatttgt cttaattatt tggtaagtgg gattatgatg agtaactgga ggggcttaga 4201 aacaaaaact ggatgaaaga gtatgcatga agaaaagctt ctttgataaa tgtggagttc 4261 ttcattataa atatatattc atgaattcac agataagtac ttaaagaaca gacagtttac 4321 ttggcctaaa aatattttga tgtttactca aaaagtacct cttcaggtct tgagaacatg 4381 gaaaagaatt gagtgctttt aaataccttt tagaaagtaa tcataaaagt aaattgaatt 4441 tcaaacctat ttggcttctg ttttgtgaac ctttgaacta tatgtatgtg tataagggta 4501 tacacataca tatatggcat ataacaagtg tacacatata cacataacaa gtgtagaagt 4561 atatattaca tacatacact cactctgtct ggtataggct aattttgaag aactcccata 4621 agtttctgct gcttctccca taactgctgc caccac //