LOCUS BC144295 5224 bp mRNA linear HUM 08-JAN-2009 DEFINITION Homo sapiens PHD and ring finger domains 1, mRNA (cDNA clone MGC:177832 IMAGE:9052815), complete cds. ACCESSION BC144295 VERSION BC144295.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 5224) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 5224) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRCB Plate: 17 Row: D Column: 24. FEATURES Location/Qualifiers source 1..5224 /db_xref="H-InvDB:HIT000502718" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:177832 IMAGE:9052815" /tissue_type="Pooled, cerebellum, kidney, placenta, testis, lung, colon, liver, heart, thyroid, bladder, uterus, PCR rescued clones" /clone_lib="NIH_MGC_364" /lab_host="DH10B" /note="Vector: pCR-XL-TOPO with reversed insert; Clone identification sequence tag: TCCTGAAT" gene 1..5224 /gene="PHRF1" /db_xref="GeneID:57661" /db_xref="HGNC:HGNC:24351" /db_xref="MIM:611780" CDS 94..5037 /gene="PHRF1" /codon_start=1 /product="PHRF1 protein" /protein_id="AAI44296.1" /db_xref="GeneID:57661" /db_xref="HGNC:HGNC:24351" /db_xref="MIM:611780" /translation="MDDDSLDELVARSPGPDGHPQVGPADPAGDFESSVGSSGDSGDD SDSEHGDGTDGEDEGASEEEDLEDRSGSEDSEDDGETLLEVAGTQGKLEAAGSFNSDD DAESCPICLNAFRDQAVGTPENCAHYFCLDCIVEWSKNANSCPVDRTLFKCICIRAQF GGKILRKIPVENTKASEEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQE VPVDEWFCPECAAPGVVLAADAGPVSEEEVSLLLADVVPTTSRLRPRAGRTRAIARTR QSERVRATVNRNRISTARRVQHTPGRLGSSLLDEAIEAVATGLSTAVYQRPLTPRTPA RRKRKTRRRKKVPGRKKTPSGPSAKSKSSATRSKKRQHRVKKRRGKKVKSEATTRSRI ARTLGLRRPVHSSCIPSVLKPVEPSLGLLRADIGAASLSLFGDPYELDPFDSEELSAN PLSPLSAKRRALSRSALQSHQPVARPVSVGLSRRRLPAAVPEPDLEEEPVPDLLGSIL SGQSLLMLGSSDVIIHRDGSLSAKRAAPVSFQRNSGSLSRGEEGFKGCLQPRALPSGS PAQGPSGNRPQSTGLSCQGRSRTPARTAGAPVRLDLPAAPGAVQARNLSNGSVPGFRQ SHSPWFNGTNRHTLPLASAASKISSRDSKPPCRSVVPGPPLKPAPRRTDISELPRIPK IRRDDGGGRRDAAPAHGQSIEIPSACISRLTGREGTGQPGRGTRAESEASSRVPREPG VHTGSSRPPAPSSHGSLAPLGPSRGKGVGSTFESFRINIPGNMAHSSQLSSPGFCNTF RPVDDKEQRKENPSPLFSIKKTKQLRSEVYDPSDPTGSDSSAPGSSPERSGPGLLPSE ITRTISINSPKAQTVQAVRCVTSYTVESIFGTEPEPPLGPSSAMSKLRGAVAAEGASD TEREEPTESQGLAARLRRPSPPEPWDEEDGASCSTFFGSEERTVTCVTVVEPEAPPSP DVLQAATHRVVELRPPSRSRSTSSSRSRKKAKRKRVSREHGRTRSGTRSESRDRSSRS ASPSVGEERPRRQRSKAKSRRSSSDRSSSRERAKRKKAKDKSREHRRGPWGHSRRTSR SRSGSPGSSSYEHYESRKKKKRRSASRPRGRECSPTSSLERLCRHKHQRERSHERPDR KESVAWPRDRRKRRSRSPSSEHRAREHRRPRSREKWPQTRSHSPERKGAVREASPAPL AQGEPGREDLPTRLPALGEAHVSPEVATADKAPLQAPPVLEVAAECEPDDLDLDYGDS VEAGHVFDDFSSDAVFIQLDDMSSPPSPESTDSSPERDFPLKPALPPASLAVAAIQRE VSLMHDEDPSQPPPLPEGTQEPHLLRPDAAEKAEAPSSPDVAPAGKEDSPSASGRVQE AARPEEVVSQTPLLRSRALVKRVTWNLQESESSAPAEDRAPRAPLHRPQKPREGAWDM EDVAPTGVRQVFSELPFPSHVLPEPGFPDTDPSQVYSPGLPPAPAQPSSIPPCALVSQ PTVQFILQGSLPLVGCGAAQTLAPVPAALTPASEPASQATAASNSEEKTPAPRLAAEK TKKEEYMKKLHMQERAVEEVKLAIKPFYQKREVTKEEYKDILRKAVQKICHSKSGEIN PVKVANLVKAYVDKYRHMRRHKKPEAGEEPPTQGAEG" BASE COUNT 1094 a 1612 c 1744 g 774 t ORIGIN 1 gcctaggagc gactctcggt cgtgcagcgg cggcgagcgc tcgcgagcgg ctgcgggacg 61 cgaggtttcc ggagctgagc tcaatgtgca gcaatggatg acgacagcct ggatgagctt 121 gtggcccgga gcccagggcc ggatggacac ccacaggtcg gccctgcgga cccggcaggt 181 gactttgaaa gcagcgtggg cagcagtggg gactctgggg acgacagtga cagcgagcat 241 ggagatggca cagacggaga agacgagggg gcgtctgagg aggaagacct ggaagacaga 301 tctggttccg aggattctga agacgacggg gagacattgc tggaggtagc gggtactcag 361 gggaaactgg aagccgctgg ctctttcaat tctgatgatg atgcagagag ctgcccaatc 421 tgtctcaacg cattcagaga ccaggccgtg gggacgccgg agaactgtgc ccattacttc 481 tgcctggact gcattgtcga atggtccaag aatgccaatt cctgtccagt tgatcgaact 541 ctatttaagt gcatttgtat tcgagctcaa tttggtggta aaatcttaag aaagatccca 601 gtggagaaca ccaaagcgag cgaggaggag gaggacccga ccttctgtga ggtgtgcggc 661 aggagcgacc gtgaggacag gcttttgctc tgcgacggct gcgatgcggg gtaccacatg 721 gaatgcttgg acccccctct ccaggaggtg ccggtggacg agtggttctg cccggaatgt 781 gctgcgcctg gtgttgtcct tgccgctgat gcgggtcccg tgagtgagga ggaggtctcc 841 ctgctcttgg ctgatgtggt gcccaccacc agcaggcttc ggcctcgagc aggtaggacc 901 cgggcgatag ccaggacacg gcagagtgag agagtgagag caaccgtgaa ccggaaccgg 961 atctccacgg ccaggagggt ccagcacaca ccagggcgcc tcgggtcttc cctgctggat 1021 gaagccatcg aggctgtggc gactggcctg agcactgccg tgtatcagcg ccccctgacg 1081 ccgcgcactc ccgcccgacg gaagaggaag acaagaagac ggaagaaagt gccgggaaga 1141 aagaaaaccc cgtccggacc atccgcaaaa agtaagagct cagcgacaag atctaagaaa 1201 cgccaacatc gagtgaagaa gagaagaggg aagaaggtaa agagtgaagc caccactcgc 1261 tctcgaatcg cgcggacgct gggcctgcgc aggcctgttc acagcagctg catcccgtca 1321 gtgttgaagc cagtggagcc ctctttgggg ctgctgagag cggatattgg agctgcctct 1381 ctgtctctgt ttggagatcc ttatgagctg gatcccttcg acagtgaaga gctttctgca 1441 aaccctcttt cccctctgag tgccaagaga cgggctctgt cccggtcagc cctgcagtcc 1501 caccagcccg tggccaggcc cgtctccgtg gggctttcca ggaggcgcct ccctgccgcg 1561 gtgccagagc cagacttgga ggaggagcca gtgcctgacc tgctgggcag catcctgtcg 1621 ggccagagcc tcctgatgct gggcagcagt gatgtcatca tccaccgcga cggctccctc 1681 agcgccaaga gggcggctcc agtttctttt cagcgaaact caggcagtct gtccagaggg 1741 gaagaaggat tcaagggctg cctgcagccc cgagcactgc cctccgggag cccggcccaa 1801 ggcccgtcag gaaacaggcc acagagcaca gggctcagct gtcaaggcag gtcccgcacc 1861 cccgcccgca ccgcgggggc gcctgtgagg ctggacttgc cagcagcccc tggggcggtt 1921 caggctcgga acttgtcaaa tgggagtgtg cctggcttca gacagagcca cagcccctgg 1981 ttcaacggca ccaacaggca caccttgccc cttgcctctg ccgcgtctaa gatctcaagc 2041 agagattcta agcccccatg tcgcagtgtg gtgccggggc ctcccctgaa gccagcgccc 2101 agaagaacag acatctctga gctacccagg ataccaaaga tcaggagaga tgacggtggt 2161 ggcagacggg atgcggcccc ggcccacggg cagagcattg agatccccag tgcctgcatc 2221 agccgactga ctggcaggga gggcaccggg cagccagggc gaggcacacg ggcagagagc 2281 gaggccagca gcagggtgcc ccgggagccc ggggtgcaca cgggcagctc ccggccccca 2341 gcccccagct cccatggcag tttggcccca ctgggaccat caagagggaa aggggtcggg 2401 tcgacctttg agagcttccg gatcaatatt cctggaaaca tggcacattc cagccagctc 2461 tccagccctg gcttctgtaa cacgttccgg cctgtggacg ataaggagca gaggaaggag 2521 aacccctcac ccctcttctc catcaagaag acgaagcagc tgcggagcga ggtctacgac 2581 ccatccgacc ccaccggctc cgactccagc gcccctggca gcagccccga gaggtctggc 2641 cccggcctcc tgccctctga gatcacacga accatctcca tcaacagccc gaaggcccag 2701 acggtgcagg ctgtgcgctg cgtcacctcc tacacggtgg agagcatctt tggtacagag 2761 cccgaacccc ctctcggacc gtcctccgcc atgtccaagc tccggggtgc agtggctgcc 2821 gagggggcct ctgacacgga gcgagaggag cccacagaga gccagggcct ggctgcccgg 2881 ctgcggaggc catccccccc agagccctgg gatgaggagg atggggcgtc ttgcagcacc 2941 ttctttggct ctgaggagcg gacggtgacc tgtgtgactg tcgtggagcc ggaagcccca 3001 cccagcccgg acgtgctgca ggctgccacc cacagagtcg tggagctcag gcccccttcc 3061 cggtcccgct ccacatccag ctcccgcagc aggaagaagg ccaagaggaa gagggtgtcc 3121 agggagcacg gacggacgcg ctctgggacg cgctctgaat ccagggacag gagctcgagg 3181 tcagcgtcac catcagtggg tgaggagcgc cccaggaggc agcggtccaa ggccaagagc 3241 cggcggtcct ccagtgaccg ctccagcagc cgagagcgag ctaagaggaa gaaagccaag 3301 gacaagagca gggagcacag gcggggcccc tggggccaca gccggaggac gtcccggtcg 3361 cggtcgggga gccctggcag ctcttcctat gagcactatg agagtaggaa gaagaagaaa 3421 aggagatcag cgtccagacc tcggggaagg gagtgctccc ccaccagcag cctggagagg 3481 ctctgcaggc acaagcatca gcgggaacgc agccacgagc ggccagacag gaaggagagt 3541 gtggcgtggc cccgagaccg gaggaagcgg aggtcccggt ccccaagctc ggagcacagg 3601 gcacgggagc acaggcggcc tcggtcccgt gagaagtggc cgcagacccg gtcccattcc 3661 ccagagagga agggggctgt gagggaggct tccccagcgc cccttgcaca gggggagcca 3721 gggcgggaag acctccccac caggttgcca gccttggggg aagcacatgt ctcgccggag 3781 gtggctacgg ccgacaaggc ccccctgcag gctccccctg tcctggaggt ggcagctgag 3841 tgtgagccgg acgacctgga cctggattat ggcgactccg tggaggccgg acacgtcttt 3901 gatgatttct caagcgacgc cgttttcatc cagctcgatg acatgagctc gccaccttct 3961 cccgaaagca cagactcttc cccggagcga gacttcccac tgaagcctgc gttgccccca 4021 gccagcctgg ccgtggccgc catccagagg gaggtgtcat tgatgcacga tgaagaccct 4081 tcgcagcccc cacccctgcc agagggcacc caggagccac atttgctcag gccggacgcg 4141 gctgagaagg ctgaggcacc cagttccccg gatgtggcgc ctgcggggaa ggaagacagc 4201 ccctctgcga gtgggagggt acaggaggca gcccggcctg aggaggtggt ttcgcagacc 4261 cccctgctgc ggtccagagc cctggtgaag cgggtcacct ggaacctgca ggagtcggag 4321 agcagcgccc ccgccgagga cagagccccc cgggcaccac ttcacaggcc acagaagccc 4381 cgagaaggag cctgggacat ggaggatgtg gcccccacag gggtcaggca ggtgttctcc 4441 gagctgccct ttcccagtca cgtgcttccg gaacccgggt tcccagacac agacccctct 4501 caggtttaca gccccggcct gccgcctgcc ccggcccagc cctcaagcat cccaccctgc 4561 gcactggtca gccagcccac ggtccagttc atccttcagg ggagcctgcc gctagtgggc 4621 tgtggggcag cacagaccct ggccccagtg cccgctgccc tgaccccagc ctcagagcca 4681 gccagtcaag ccactgcagc cagcaactcg gaggagaaga ccccggcccc caggctagct 4741 gcggagaaaa ccaagaagga ggagtacatg aagaagctgc acatgcagga gcgtgctgtg 4801 gaggaggtga agctggccat caagcccttc taccagaaga gggaggtgac caaggaggag 4861 tacaaggaca tcctgcgcaa ggccgtgcag aagatctgcc acagcaagag tggagagatc 4921 aaccccgtga aggtggccaa cctggtgaag gcgtacgtgg acaagtacag gcacatgcgc 4981 aggcacaaga aaccagaggc cggggaggag ccgcccacgc agggggccga gggctgaggc 5041 caggcaatca cgggctatgc ccggggagct gtcgggagtg gcgggaatcg gggccatgcc 5101 cggggagctg tcgggagtgg cgggaatcgg ggccatgccc ggggagctgt cgggagtggc 5161 gggaaatggg gggcatcacc atgcctgccg tcgggttcct gcgctgacac ctggtctgtg 5221 cacc //