LOCUS BC144294 5218 bp mRNA linear HUM 08-JAN-2009
DEFINITION Homo sapiens PHD and ring finger domains 1, mRNA (cDNA clone
MGC:177831 IMAGE:9052814), complete cds.
ACCESSION BC144294
VERSION BC144294.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 5218)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 5218)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 17 Row: D Column: 22.
FEATURES Location/Qualifiers
source 1..5218
/db_xref="H-InvDB:HIT000502717"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177831 IMAGE:9052814"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_363"
/lab_host="DH10B"
/note="Vector: pCR-XL-TOPO; Clone identification sequence
tag: CGCCGCGT"
gene 1..5218
/gene="PHRF1"
/db_xref="GeneID:57661"
/db_xref="HGNC:HGNC:24351"
/db_xref="MIM:611780"
CDS 94..5031
/gene="PHRF1"
/codon_start=1
/product="PHRF1 protein"
/protein_id="AAI44295.1"
/db_xref="GeneID:57661"
/db_xref="HGNC:HGNC:24351"
/db_xref="MIM:611780"
/translation="MDDDSLDELVARSPGPDGHPQVGPADPAESSVGSSGDSGDDSDS
EHGDGTDGEDEGASEEEDLEDRSGSEDSEDDGETLLEVAGTQGKLEAAGSFNSDDDAE
SCPICLNAFRDQAVGTPENCAHYFCLDCIVEWSKNANSCPVDRTLFKCICIRAQFGGK
ILRKIPVENTKASEEEEDPTFCEVCGRSDREDRLLLCDGCDAGYHMECLDPPLQEVPV
DEWFCPECAAPGVVLAADAGPVSEEEVSLLLADVVPTTSRLRPRAGRTRAIARTRQSE
RVRATVNRNRISTARRVQHTPGRLGSSLLDEAIEAVATGLSTAVYQRPLTPRTPARRK
RKTRRRKKVPGRKKTPSGPSAKSKSSATRSKKRQHRVKKRRGKKVKSEATTRSRIART
LGLRRPVHSSCIPSVLKPVEPSLGLLRADIGAASLSLFGDPYELDPFDSSEELSANPL
SPLSAKRRALSRSALQSHQPVARPVSVGLSRRRLPAAVPEPDLEEEPVPDLLGSILSG
QSLLMLGSSDVIIHRDGSLSAKRAAPVSFQRNSGSLSRGEEGFKGCLQPRALPSGSPA
QGPSGNRPQSTGLSCQGRSRTPARTAGAPVRLDLPAAPGAVQARNLSNGSVPGFRQSH
SPWFNGTNKHTLPLASAASKISSRDSKPPCRSVVPGPPLKPAPRRTDISELPRIPKIR
RDDGGGRRDAAPAHGQSIEIPSACISRLTGREGTGQPGRGTRAESEASSRVPREPGVH
TGSSRPPAPSSHGSLAPLGPSRGKGVGSTFESFRINIPGNMAHSSQLSSPGFCNTFRP
VDDKEQRKENPSPLFSIKKTKQLRSEVYDPSDPTGSDSSAPGSSPERSGPGLLPSEIT
RTISINSPKAQTVQAVRCVTSYTVESIFGTEPEPPLGPSSAMSKLRGAVAAEGASDTE
REEPTESQGLAARLRRPSPPEPWDEEDGASCSTFFGSEERTVTCVTVVEPEAPPSPDV
LQAATHRVVELRPPSRSRSTSSSRSRKKAKRKRVSREHGRTRSGTRSESRDRSSRSAS
PSVGEERPRRQRSKAKSRRSSSDRSSSRERAKRKKAKDKSREHRRGPWGHSRRTSRSR
SGSPGSSSYEHYESRKKKKRRSASRPRGRECSPTSSLERLCRHKHQRERSHERPDRKE
SVAWPRDRRKRRSRSPSSEHRAREHRRPRSREKWPQTRSHSPERKGAVREASPAPLAQ
GEPGREDLPTRLPALGEAHVSPEVATADKAPLQAPPVLEVAAECEPDDLDLDYGDSVE
AGHVFDDFSSDAVFIQLDDMSSPPSPESTDSSPERDFPLKPALPPASLAVAAIQREVS
LMHDEDPSQPPPLPEGTQEPHLLRPDAAEKAEAPSSPDVAPAGKEDSPSASGRVQEAA
RPEEVVSQTPLLRSRALVKRVTWNLQESESSAPAEDRAPRAPLHRPQKPREGAWDMED
VAPTGVRQAFSELPFPSHVLPEPGFPDTDPSQVYSPGLPPAPAQPSSIPPCALVSQPT
VQFILQGSLPLVGCGAAQTLAPVPAALTPASEPASQATAASNSEEKTPAPRLAAEKTK
KEEYMKKLHMQERAVEEVKLAIKPFYQKREVTKEEYKDILRKAVQKICHSKSGEINPV
KVANLVKAYVDKYRHMRRHKKPEAGEEPPTQGAEG"
BASE COUNT 1096 a 1612 c 1741 g 769 t
ORIGIN
1 gcctaggagc gactctcggt cgtgcagcgg cggcgagcgc tcgcgagcgg ctgcgggacg
61 cgaggtttcc ggagctgagc tcaatgtgca gcaatggatg acgacagcct ggatgagctt
121 gtggcccgga gcccagggcc ggatggacac ccacaggtcg gccctgcgga cccggcagaa
181 agcagcgtgg gcagcagtgg ggactctggg gacgacagtg acagcgagca tggagatggc
241 acagacggag aagacgaggg ggcgtctgag gaggaagacc tggaagacag atctggttcc
301 gaggattctg aagacgacgg ggagacattg ctggaggtag cgggtactca ggggaaactg
361 gaagccgctg gctctttcaa ttctgatgat gatgcagaga gctgcccaat ctgtctcaac
421 gcattcagag accaggccgt ggggacgccg gagaactgtg cacattactt ctgcctggac
481 tgcattgtcg aatggtccaa gaatgccaat tcctgtccag ttgatcgaac tctatttaag
541 tgcatttgta ttcgagctca atttggtggt aaaatcttaa gaaagatccc agtggagaac
601 accaaagcga gcgaggagga ggaggacccg accttctgtg aggtgtgcgg caggagcgac
661 cgtgaggaca ggcttttgct ctgcgacggc tgcgatgcgg ggtaccacat ggaatgcttg
721 gacccccctc tccaggaggt gccggtggac gagtggttct gcccggaatg tgctgcgcct
781 ggtgttgtcc ttgccgctga tgcgggtccc gtgagtgagg aggaggtctc cctgctcttg
841 gctgatgtgg tgcccaccac cagcaggctt cggcctcgag caggtaggac ccgggcgata
901 gccaggacac ggcagagtga gagagtgaga gcaaccgtga accggaaccg gatctccacg
961 gccaggaggg tccagcacac accagggcgc ctcgggtctt ccctgctgga tgaagccatc
1021 gaggctgtgg cgactggcct gagcactgcc gtgtatcagc gccccctgac gccgcgcact
1081 cccgcccgac ggaagaggaa gacaagaaga cggaagaaag tgccgggaag aaagaaaacc
1141 ccgtccggac catccgcaaa aagtaagagc tcagcgacaa gatctaagaa acgccaacat
1201 cgagtgaaga agagaagagg gaagaaggta aagagtgaag ccaccactcg ctctcgaatc
1261 gcgcggacgc tgggcctgcg caggcctgtt cacagcagct gcatcccgtc agtgttgaag
1321 ccagtggagc cctctttggg gctgctgaga gcggatattg gagctgcctc tctgtctctg
1381 tttggagatc cttatgagct ggatcccttc gacagcagtg aagagctttc tgcaaaccct
1441 ctttcccctc tgagtgccaa gagacgggct ctgtcccggt cagccctgca gtcccaccag
1501 cccgtggcca ggcccgtctc cgtggggctt tccaggaggc gcctccctgc cgcggtgcca
1561 gagccagact tggaggagga gccagtgcct gacctgctgg gcagcatcct gtcgggccag
1621 agcctcctga tgctgggcag cagtgatgtc atcatccacc gcgacggctc cctcagcgcc
1681 aagagggcgg ctccagtttc ttttcagcga aactcaggca gtctgtccag aggggaagaa
1741 ggattcaagg gctgcctgca gccccgagca ctgccctccg ggagcccggc ccaaggcccg
1801 tcaggaaaca ggccacagag cacagggctc agctgtcaag gcaggtcccg cacccccgcc
1861 cgcaccgcgg gggcgcctgt gaggctggac ttgccagcag cccctggggc ggttcaggct
1921 cggaacttgt caaatgggag tgtgcctggc ttcagacaga gccacagccc ctggttcaac
1981 ggcaccaaca agcacacctt gccccttgcc tctgccgcgt ctaagatctc aagcagagat
2041 tctaagcccc catgtcgcag tgtggtgccg gggcctcccc tgaagccagc gcccagaaga
2101 acagacatct ctgagctacc caggatacca aagatcagga gagatgacgg tggtggcaga
2161 cgggatgcgg ccccggccca cgggcagagc attgagatcc ccagtgcctg catcagccga
2221 ctgactggca gggagggcac cgggcagcca gggcgaggca cacgggcaga gagcgaggcc
2281 agcagcaggg tgccccggga gcccggggtg cacacgggca gctcccggcc cccagccccc
2341 agctcccatg gcagtttggc cccactggga ccatcaagag ggaaaggggt cgggtcgacc
2401 tttgagagct tccggatcaa tattcctgga aacatggcac attccagcca gctctccagc
2461 cctggcttct gtaacacgtt ccggcctgtg gacgataagg agcagaggaa ggagaacccc
2521 tcacccctct tctccatcaa gaagacgaag cagctgcgga gcgaggtcta cgacccatcc
2581 gaccccaccg gctccgactc cagcgcccct ggcagcagcc ccgagaggtc tggccccggc
2641 ctcctgccct ctgagatcac acgaaccatc tccatcaaca gcccgaaggc ccagacggtg
2701 caggctgtgc gctgcgtcac ctcctacacg gtggagagca tctttggtac agagcccgaa
2761 ccccctctcg gaccgtcctc cgccatgtcc aagctccggg gtgcagtggc tgccgagggg
2821 gcctctgaca cggagcgaga ggagcccaca gagagccagg gcctggctgc ccggctgcgg
2881 aggccatccc ccccagagcc ctgggatgag gaggatgggg cgtcttgcag caccttcttt
2941 ggctctgagg agcggacggt gacctgtgtg actgtcgtgg agccggaagc cccacccagc
3001 ccggacgtgc tgcaggctgc cacccacaga gtcgtggagc tcaggccccc ttcccggtcc
3061 cgctccacat ccagctcccg cagcaggaag aaggccaaga ggaagagggt gtccagggag
3121 cacggacgga cgcgctctgg gacgcgctct gaatccaggg acaggagctc gaggtcagcg
3181 tcaccatcag tgggtgagga gcgccccagg aggcagcggt ccaaggccaa gagccggcgg
3241 tcctccagtg accgctccag cagccgagag cgagctaaga ggaagaaagc caaggacaag
3301 agcagggagc acaggcgggg cccctggggc cacagccgga ggacgtcccg gtcgcggtcg
3361 gggagccctg gcagctcttc ctatgagcac tatgagagta ggaagaagaa gaaaaggaga
3421 tcagcgtcca gacctcgggg aagggagtgc tcccccacca gcagcctgga gaggctctgc
3481 aggcacaagc atcagcggga acgcagccac gagcggccag acaggaagga gagtgtggcg
3541 tggccccgag accggaggaa gcggaggtcc cggtccccaa gctcggagca cagggcacgg
3601 gagcacaggc ggcctcggtc ccgtgagaag tggccgcaga cccggtccca ttccccagag
3661 aggaaggggg ctgtgaggga ggcttcccca gcgccccttg cacaggggga gccagggcgg
3721 gaagacctcc ccaccaggtt gccagccttg ggggaagcac atgtctcgcc ggaggtggct
3781 acggccgaca aggcccccct gcaggctccc cctgtcctgg aggtggcagc tgagtgtgag
3841 ccggacgacc tggacctgga ttatggcgac tccgtggagg ccggacacgt ctttgatgat
3901 ttctcaagcg acgccgtttt catccagctc gatgacatga gctcgccacc ttctcccgaa
3961 agcacagact cttccccgga gcgagacttc ccactgaagc ctgcgttgcc cccagccagc
4021 ctggccgtgg ccgccatcca gagggaggtg tcattgatgc acgatgaaga cccttcgcag
4081 cccccacccc tgccagaggg cacccaggag ccacatttgc tcaggccgga cgcggctgag
4141 aaggctgagg cacccagttc cccggatgtg gcgcctgcgg ggaaggaaga cagcccctct
4201 gcgagtggga gggtacagga ggcagcccgg cctgaggagg tggtttcgca gacccccctg
4261 ctgcggtcca gagccctggt gaagcgggtc acctggaacc tgcaggagtc ggagagcagc
4321 gcccccgccg aggacagagc cccccgggca ccacttcaca ggccacagaa gccccgagaa
4381 ggagcctggg acatggagga tgtggccccc acaggggtca ggcaggcgtt ctccgagctg
4441 ccctttccca gtcacgtgct tccggaaccc gggttcccag acacagaccc ctctcaggtt
4501 tacagccccg gcctgccgcc tgccccggcc cagccctcaa gcatcccacc ctgcgcactg
4561 gtcagccagc ccacggtcca gttcatcctt caggggagcc tgccgctagt gggctgtggg
4621 gcagcacaga ccctggcccc agtgcccgct gccctgaccc cagcctcaga gccagccagt
4681 caagccactg cagccagcaa ctcggaggag aagaccccgg cccccaggct agctgcggag
4741 aaaaccaaga aggaggagta catgaagaag ctgcacatgc aggagcgtgc tgtggaggag
4801 gtgaagctgg ccatcaagcc cttctaccag aagagggagg tgaccaagga ggagtacaag
4861 gacatcctgc gcaaggccgt gcagaagatc tgccacagca agagtggaga gatcaacccc
4921 gtgaaggtgg ccaacctggt gaaggcgtac gtggacaagt acaggcacat gcgcaggcac
4981 aagaaaccag aggccgggga ggagccgccc acgcaggggg ccgagggctg aggccaggca
5041 atcacgggct atgcccgggg agctgtcggg agtggcggga atcggggcca tgcccgggga
5101 gctgtcggga gtggcgggaa tcggggccat gcccggggag ctgtcgggag tggcgggaaa
5161 tggggggcat caccatgcct gccgtcgggt tcctgcgctg acacctggtc tgtgcacc
//