LOCUS BC144282 4239 bp mRNA linear HTC 02-JAN-2009
DEFINITION Homo sapiens cDNA clone IMAGE:9052802, with apparent retained
intron.
ACCESSION BC144282
VERSION BC144282.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4239)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4239)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Ambion
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 17 Row: F Column: 6
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..4239
/db_xref="H-InvDB:HIT000502707"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:9052802"
/tissue_type="Brain, PCR rescued clones"
/clone_lib="NIH_MGC_309"
/note="Vector: pCR-XL-TOPO with reversed insert; Clone
identification sequence tag: TGCGTCCT"
BASE COUNT 1392 a 764 c 863 g 1220 t
ORIGIN
1 ttcctcgcgt tcttgagtcg ggaaatggcc gctgtgtggt tgcaacggag ataaattccc
61 ggaaccgcga ttcggcgtgt caggaattcg aatttagagt ttaatttctc agagcattct
121 ctccaggaag aatttttaca gtatctcaaa gacttcactt gacttcttga tcctgcataa
181 aaccaaggag aaaagaaatg ggtcgctcca attctagatc acattcttca aggtcaaagt
241 ctagatcaca gtctagttct cgatcaagat caagatctca ttctagaaag aagcgataca
301 ggtctcgttc cagaacatat tcaaggtctc gtagtagaga tcgtatgtat tctagagatt
361 atcgtcgcga ttacagaaat aatagaggaa tgagacgacc ttatgggtac agaggaaggg
421 gtagagggta ttatcaagga ggaggaggta gatatcatcg aggtggttat agacctgtct
481 ggaatagaag gcactctagg agtcctagac gaggtcgttc acgttccagg agtccaaaaa
541 gaagatccgt ttcttctcaa agatccagaa gcagatctcg ccggtcatat agatcttcta
601 ggtctccaag atcatcctct tctcgttctt catccccata tagcaaatct cctgtttcta
661 aaagacgagg gtctcaggaa aaacaaacca aaaaagctga aggggaaccc caagaagaga
721 gtccgttgaa aagtaaatca caggaggaac cgaaagatac atttgaacat gacccatctg
781 agtctatcga tgaatttaat aagtcatcag ccacatccgg tgatatttgg cctggccttt
841 cagcttatga taatagtcct agatcacccc atagtccttc acctattgct acaccaccta
901 gtcagagttc atcttgctct gatgctccca tgctcagtac agttcactct gcaaaaaata
961 ctccttctca gcattcacat tccattcagc atagtcctga aaggtctggg tctggttctg
1021 ttggaaatgg atctagtcga tacagtcctt ctcagaatag tccaattcat cacatccctt
1081 cacgaagaag tcctgcaaag acaatcgcac cacagaatgc tccaagagat gagtctaggg
1141 gccgttcctc gttttatcct gatggtggag atcaggaaac tgcaaagact gggaagttct
1201 taaaaagtcc ccctctacac aagaatctgg atgcacgaga aaagtctacc ttcagagagg
1261 aaagcccact taggatcaaa atgatagcga gtgattctca ccgtcctgaa gtcaaactca
1321 aaatggcacc tgttcctctt gatgattcta acagacctgc ttccttgact aaagacaggc
1381 tgcttgctag tacacttgtc cattctgtca agaaggagca agaattccga tccatctttg
1441 accacattaa gttgccacag gccagcaaaa gcacttcaga gtcatttatt caacacattg
1501 tgtccttggt tcatcatgtt aaaggtcctg gaatatgttt tgaaatggca aaatccatgt
1561 ttcaaagtaa aatagctgtt gaaagataca ggcaaagttg aatcttctgt cttcctggca
1621 aaaatggcat aaaaactgag ttgctagctc aaattcctgg gtttcatgga attatgattg
1681 aggcactacc cttgtagtgg ccgtttcaag ttttaatgat tggttatgag acatgtgctg
1741 gatattgggc gagcaatact tcaagtcagc tgcaatgacc ctaaacgagc ggttcacttc
1801 gtatcagaaa gccactgaag aacatagtac tcggcaaaag agccctgaaa tacacaggag
1861 aattgacatc tcaccaagta ccctgaggaa gcatacccgt ttagcagggg aagagagagt
1921 ttttaaagaa gaaaatcaaa agggagataa aaaattaagg tgtgactctg ctgaccttcg
1981 gcatgacatt gatcgccgta gaaaagaaag aagtaaagaa cggggagatt ccaagggctc
2041 cagggaatcc agtggatcaa gaaagcagga aaaaactcca aaagattaca aggaatacaa
2101 atcttacaaa gatgacagca aaaatgtatt tgtcttttac acggcttatg gtggatgagg
2161 acaaaaactt tggaatagca agctaacact gaaaaaaaaa atgacaaatt aatgtgtcct
2221 attatccagg ctacatcagg aggttggact tcaatgcagt gcatttctag aaacagtttg
2281 ttaaacataa aagagagcaa gatcattctc gatcttcatc ctcttcagca tcaccttctt
2341 ctcccagttc tcgagaagaa aaggagagta agaaggaaag agaagaagaa tttaaaactc
2401 accatgaaat gaaagaatac tcaggctttg caggagttag ccgaccacga ggaacctttt
2461 ttcgaattag aggcagagga agagccagag gagtttttgc tgggacaaat actggtccaa
2521 acaactcaaa tactactttt caaaagagac cgaaggaaga ggaatgggat ccagaatata
2581 ccccaaagag caagaagtac ttcttgcatg acgacagaga tgatggtgtg gattattggg
2641 ccaaaagagg aagaggtcgt ggtacttttc aacgtggcag agggcgcttt aacttcaaaa
2701 aatcaggtag cagtcctaaa tggactcatg acaaatacca aggggatggg attgttgaag
2761 atgaagaaga gaccatggaa aataatgaag aaaagaagga cagacgcaag gaagaaaagg
2821 aataataaat atgaagtaag attacaacag agcagaactt gcacccacca ttttttttac
2881 ctgatttttg ttttcaaata agaatgtaag cattttactt aaattttact gtttgcaagt
2941 agtctataga aattttgttt taagtcttca aatatcttga gaaatagtag actgtatgtt
3001 gaaaattgta ctgaaataaa gtagaaaatt gttacgtacc atatttgtaa ctatcaactt
3061 ttaaaacttt taacgttttt gttacatgca ttgtaattct gctttgtcta taagatatgg
3121 tcaagtacag ctctgtgaaa gttctgattc tcttccttcc ctgtttgtca atgttttatt
3181 ctgaagtaaa cgttagctct acatataaat cctggaacag aaattgttta tagagactac
3241 actaattatt ttaactgtat acatctgttt aatttgaaca cactacatcg tagggtgact
3301 gatttttgaa gtataccaca gacaaaaagt tgttactatg gtaaactaag ctagtttaac
3361 acttgagcaa atgcttaaga aggaattaaa aaaaaaaagc tttgccaata gctaaaaagt
3421 acaagctatt aaaaatcaga ttgaaaagtt ttgagaaaat gttattttta ctgaaagcaa
3481 gcagtggcct ataaagaaca ttcttaggag ccttttctat ttgcgttcaa aactgtgtgt
3541 tctctttcta ttcctatttg atagtttgag tcatggtctt agatattagc tatttgtgag
3601 aggaaactgg tttgtaacaa tactgcaaat agaaacccca tttctactga acatcctagt
3661 tttaaacaga agaaaaactg taatcctggg gttggtatgt aggaggtcta tcctgcagaa
3721 taagttgata cattagtacc tgatttcata tcttacatat ttatttgagc tgaacattag
3781 tttgtagtgt aactattagt aaaaatagag aaacacagca tactgttcat taatagtatt
3841 ttaaaaaaat tgtttttcaa atgtcaccaa taaaagtttt ggcaggaagc ttgttgcggc
3901 attgatctaa cctttttccc ccccatttca gttgcagttt ttgtagaatg gctttttctt
3961 tttcctctta agagttctat tcttcaggta gataattttt caaatgtgaa ttatcttttg
4021 tgtctatatt gatagctctt aaaggagtga aaatctaaaa tagtaaattt caatgttaag
4081 tgtctgcttt atgggcatat ataaaagtag acacatttca tttgttaatt tagttgtgtg
4141 tgtgtgttaa aaggagctaa tgcttattct gttaatgtaa acttttgaag atcttaagtg
4201 tattgctctt tcatcttaaa cactttcgag gatttgcag
//