LOCUS BC144243 3082 bp mRNA linear HTC 02-JAN-2009
DEFINITION Homo sapiens cDNA clone IMAGE:9052763, with apparent retained
intron.
ACCESSION BC144243
VERSION BC144243.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3082)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3082)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 17 Row: J Column: 17
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..3082
/db_xref="H-InvDB:HIT000502669"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:9052763"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: AACATAGG"
BASE COUNT 1021 a 523 c 741 g 797 t
ORIGIN
1 ttccctccct ccttccttcc gccgcaacat ggctaacaac agccccgcgc tgacaggcaa
61 ctcgcagccg cagcaccagg cggctgcagc tgcggctcag caacagcagc agtgcggcgg
121 cggcggcgct accaagccgg cggtctccgg caagcagggc aatgtgctcc cgctctgggg
181 caacgagaag accatgaacc tcaaccccat gatcctgacc aacatcctgt cgtcgcctta
241 cttcaaagta cagctctacg agctcaagac ctaccacgag gtggtggacg agatctactt
301 taaggtcacg cacgttgaac catgggagaa aggaagcagg aaaacagcgg gccagacagg
361 gatgtgcgga ggggtaagta gaagttcgag gtgttggaac aggaggaatt gtttctacag
421 cattttgcct gttatacaaa ttatttaccc tgaagttaac tcgaaagcaa gtgatgggtc
481 ttataacaca cacagactct ccatatatta gagcgcttgg atttatgtat ataagatata
541 cacagccccc tacagatctg tgggactggt ttgaatcctt ccttgatgat gaagaggttt
601 gggactgaca atagctgact aacatgtcct gagctgtgag agggcatagc aagaaggcct
661 tcatgcggac ctagatgtga aggctggtgg aggctgtgta atgaccattg gagaaatgct
721 acgatctttt ctcacaaaac tggagtggtt ttctaccttg tttccaagaa ttccagttcc
781 agttcaaaag aatattgatc aacagattaa aacccgacct agaaaaatca agaaagatgg
841 gaaggaaggt gctgaggaaa tagacagaca tgttgaacgc agacgttcaa ggtctccaag
901 gagatctctg agtccacgga ggtccccaag aaggtcaaga agtagaagtc atcatcggga
961 gggccatggg tcttctagtt ttgacagaga attagaaaga gagaaagaac gccagcgact
1021 agagcgtgaa gccaaagaaa gggagaaaga acggcgaaga tcccgaagta ttgaccgggg
1081 gttagaacgc aggcgcagca gaagtaggga aaggcataga agtcgcagtc gaagtcgtga
1141 taggaaaggg gatagaaggg acagggatcg agaaagagag aaagaaaatg agagaggtag
1201 aagacgagat cgtgactatg ataaggaaag aggaaatgaa cgagaaaaag agagagagcg
1261 atcaagagaa aggtccaagg aacagagaag taggggagag gtagaagaga agaaacataa
1321 agaagacaaa gatgataggc ggcacagaga tgacaaaaga gattccaaga aagagaaaaa
1381 acacagtaga agcagaagca gagaaaggaa acacagaagt aggagtcgaa gtagaaatgc
1441 agggaaacga agtagaagta gaagcaaaga gaaatcaagt aaacataaaa atgaaagtaa
1501 agaaaaatca aataaacgaa gtcgaagtgg cagtcaagga agaactgaca gtgttgaaaa
1561 atcaaaaaaa cgggaacata gtcccagcaa agaaaaatct agaaagcgta gtagaagcaa
1621 agaacgttcc cacaaacgag atcacagtga tagtaaggac cagtcagaca aacatgatcg
1681 tcgaaggagc caaagtatag aacaagagag ccaagaaaaa cagcataaaa acaaagatga
1741 gactgtgtga aaatattttg taaaagtgga tcacattgaa tcctataaat gattaaatct
1801 gcttttttcc cccacgttga gattgtgcag tagttcgcac tcctcaagct ctccctgtag
1861 gctgcatttt catttcctct ttcgtgtagg gaagtgcctt tgtaattcca tttattgcat
1921 tggtgttttc acccaattgt taagtttgat acatgatgca cagattgttc ttgcattttt
1981 attgtttgtt tttgaaatgt acagtctgta catatgtcct gaaaatgttt taattccttt
2041 ggcatggttg ccatgttggt taaatttgta taaggcaata aactgccact aatctatttt
2101 tgttttgtag gtgtgggatt atggtttgtg tactgaagtt agcatggctg tgcttttcgt
2161 aatagaatgc taaagacttt gagaatggat cttggatgtc tattatagga gaagtatgtg
2221 ctgccaatgt acaagaaggc agcattgtag gattaacatt cttgtctact gtatattatc
2281 ttggaaggct cttgttaata tgttacactt aatattctcc acagttacct ttagagagaa
2341 tttatgagaa gttagtttct gatgcagagg tttttaggct gtgatttcat caaaagtcct
2401 tttagcattc tacctcaaag ggacacttag tatgcctaaa atttattcac ttagttttcc
2461 ttttttattt gaaaaaatac atgacatgta atcttttttt cttgaattct ttctcagatt
2521 ttaaagtact atattaaaga aaaaaattaa tgtctaaagc ctagcattct tgcagaaccc
2581 tatactaaca tgtaatgggg agagggtggg gcagatgagt agagaaacag attcaagcct
2641 caagcttcca aagcattttt ataaatggaa aatccttaaa ttatgaaaca gcttgatata
2701 gtgtcctttt tttaaaattc agaacttttt ttattgataa tggagattgc tgtttgagtt
2761 tttaaactta atctagaaca gaggagtatt aaaagtaatg ctgtgctgca ttatttaaga
2821 ctatcagcaa attatttgat agattgttct tacaacttgt attctgatta cagaaccatc
2881 atgagtgtgg aataaatact ggattaaatc ctttatcctg ggtcttggct tttcccccat
2941 ttgttaaatt tttttagcat atttatattg tggaaattga tgaaacgtca gtagagtcac
3001 actttgtgta cagggatgtc ttagtgccca gatgacaagt gaattttgga gaaatgcata
3061 gactgggatt gggcatgtgg ta
//