LOCUS BC144115 3535 bp mRNA linear HUM 08-JAN-2009
DEFINITION Homo sapiens synaptotagmin-like 2, mRNA (cDNA clone MGC:177652
IMAGE:9052635), complete cds.
ACCESSION BC144115
VERSION BC144115.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3535)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3535)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 17 Row: E Column: 4.
FEATURES Location/Qualifiers
source 1..3535
/db_xref="H-InvDB:HIT000502545"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177652 IMAGE:9052635"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_311"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: TACCCACG"
gene 1..3535
/gene="SYTL2"
/gene_synonym="CHR11SYT"
/gene_synonym="SGA72M"
/gene_synonym="SLP2"
/db_xref="GeneID:54843"
/db_xref="HGNC:HGNC:15585"
CDS 277..3081
/gene="SYTL2"
/gene_synonym="CHR11SYT"
/gene_synonym="SGA72M"
/gene_synonym="SLP2"
/codon_start=1
/product="SYTL2 protein"
/protein_id="AAI44116.1"
/db_xref="GeneID:54843"
/db_xref="HGNC:HGNC:15585"
/translation="MIDLSFLTEEEQEAIMKVLQRDAALKRAEEERVRHLPEKIKDDQ
QLKNMSGQWFYEAKAKRHRDKIHGADIIRASMRKKRPQIAAEQSKDRENGAKESWVNN
VNKDAFLPPELAGVVEEPEEDAAPASPSSSVVNPASSVIDMSQENTRKPNVSPEKRKN
PFNSSKLPEGHSSQQTKNEQSKNGRTGLFQTSKEDELSESKEKSTVADTSIQKLEKSK
QTLPGLSNGSQIKAPIPKARKMIYKSTDLNKDDNQSFPRQRTDSLKARGAPRGILKRN
SSSSSTDSETLRYNHNFEPKSKIVSPGLTIHERISEKEHSLEDNSSPNSLEPLKHVRF
SAVKDELPQSPGLIHGREVGEFSVLESDRLKNGMEDAGDTEEFQSDPKPSQYRKPSLF
HQSTSSPYVSKSETHQPMTSGSFPINGLHSHSEVLTARPQSMENSPTINEPKDKSSEL
TRLESVLPRSPADELSHCVEPEPSQVPGGSSRDRQQGSEEEPSPVLKTLERSAARKMP
SKSLEDISSDSSNQAKVDNQPEELVRSAEDVSTVPTQPDNPFSHPDKLKRMSKSVPAF
LQDESDDRETDTASESSYQLSRHKKSPSSLTNLSSSSGMTSLSSVSGSVMSVYSGDFG
NLEVKGNIQFAIEYVESLKELHVFVAQCKDLAAADVKKQRSDPYVKAYLLPDKGKMGM
KKTLVVKKTLNPVYNEILRYKIEKQILKTQKLNLSIWHRDTFKRNSFLGEVELDLETW
DWDNKQNKQLRWYPLKRKTAPVALEAENRGEMKLALQYVPEPVPGKKLPTTGEVHIWV
KECLDLPLLRGSHLNSFVKCTILPDTSRKSRQKTRAVGKTTNPIFNHTMVYDGFRPED
LMEACVELTVWDHYKLTNQFLGGLRIGFGTGKSYGTEVDWMDSTSEEVALWEKMVNSP
NTWIEATLPLRMLLIAKISK"
BASE COUNT 1161 a 724 c 792 g 858 t
ORIGIN
1 aacaagcgac ctgtttggca aggaatacag catccttctg agagcctctt ctcgacacta
61 tcccacagac caggacttcc tcatgggaaa gagcacttag gatcttgcta tcagctgccc
121 taaacttttg ctgagccaaa ataagacttt gatgcagaac tgaacaagat atttcatttt
181 tgtgtgtttt aatcttcctg gttgcagtct tagttgttca gccctgagaa ttttgagcca
241 catttgttgc tattattttt gcatgcactt ttcaaaatga ttgacttaag cttcctgact
301 gaagaggaac aagaggccat catgaaggtt ttgcagcggg atgctgctct gaagagggcc
361 gaagaagaga gagtcagaca tttgcctgaa aaaattaagg atgaccagca gctgaagaat
421 atgagtggcc aatggtttta tgaagccaag gcaaaaaggc acagggacaa aatccatggc
481 gcagatatca tcagagcatc tatgagaaag aagaggcccc agatagcagc tgagcagagt
541 aaagacagag aaaatggggc aaaggaaagc tgggtgaata atgtcaacaa agatgctttc
601 cttcctccag agctggctgg cgttgtagaa gagccagaag aggatgcagc accagcaagc
661 ccgagttcca gtgtggtaaa tccagcttcc agtgtgattg atatgtccca ggaaaacaca
721 aggaaaccaa atgtgtctcc agagaagagg aagaatccgt ttaatagctc caagttgcca
781 gaaggtcact cgtcacaaca aactaaaaat gaacagtcaa aaaatggaag aactggttta
841 tttcagactt caaaagagga tgaattgtca gagtcaaaag aaaagtcaac tgtcgcagat
901 acttcaatcc aaaagttaga gaaatcaaag cagactttgc caggcctttc aaatgggtcc
961 caaatcaagg ctccaatccc caaagccagg aagatgatct acaaatcaac tgatttaaac
1021 aaagatgata accagtcttt tcctagacaa aggacagact ccctgaaagc gagaggggct
1081 ccgagaggga tcctcaagcg caactccagt tccagtagca cagactcaga aacccttcgt
1141 tataatcaca actttgaacc caaaagcaaa attgtgtcac ctggcctaac catccatgag
1201 agaatttctg agaaggagca ttctttagaa gacaactctt ccccaaactc cctggagcca
1261 ttaaagcatg tgagattctc tgcagtgaag gatgagcttc cacagagtcc tgggctaatc
1321 catggtcggg aagtaggaga atttagtgtt ttagaatctg acagattgaa aaatggaatg
1381 gaagatgcag gggacacaga agagtttcag agtgacccta agccttctca atacagaaag
1441 ccttcgcttt ttcatcaatc aacctcaagc ccatatgtat caaaaagtga aacacatcag
1501 ccaatgactt ctggttcttt tccaattaat gggctgcatt ctcattcaga agttttaact
1561 gcaagaccac agtctatgga gaattcacca accatcaatg aacccaaaga taaatcatca
1621 gaattaacaa ggcttgaatc tgtattaccc agaagccctg ctgatgaact gtctcattgt
1681 gttgagcctg agccatctca ggtgccaggt ggcagttcta gagaccgtca gcaaggttca
1741 gaagaagaac ccagtcctgt tttgaaaact ttggaaagga gtgccgctag gaaaatgcct
1801 tccaaaagtc tagaagacat ttcatcagat tcatcaaatc aagcaaaagt agataatcag
1861 ccagaagaat tagtgcgtag tgctgaagat gtttccacag tgcctacaca acctgataat
1921 ccattttctc accctgacaa actcaaaagg atgagcaagt ctgttccagc atttctccaa
1981 gatgagagtg atgacagaga aacagataca gcatcagaaa gcagttacca gctcagcaga
2041 cacaagaaga gcccgagctc tttaaccaat cttagcagct cctctggcat gacgtccttg
2101 tcttctgtga gtggcagtgt gatgagtgtt tatagtggag actttggcaa tctggaagtt
2161 aaaggaaata ttcagtttgc aattgaatat gtggagtcac tgaaggagtt gcatgttttt
2221 gtggcccagt gtaaggactt agcagcagcg gatgtaaaaa aacagcgttc agacccatat
2281 gtaaaggcct atttgctacc agacaaaggc aaaatgggca tgaagaaaac actcgtagtg
2341 aagaaaacct tgaatcctgt gtataacgaa atactgcggt ataaaattga aaaacaaatc
2401 ttaaagacac agaaattgaa cctgtccatt tggcatcggg atacatttaa gcgcaatagt
2461 ttcctagggg aggtggaact tgatttggaa acatgggact gggataacaa acagaataaa
2521 caattgagat ggtaccctct gaagcggaag acagcaccag ttgcccttga agcagaaaac
2581 agaggtgaaa tgaaactagc tctccagtat gtcccagagc cagtccctgg taaaaagctt
2641 cctacaactg gagaagtgca catctgggtg aaggaatgcc ttgatctacc actgctaagg
2701 ggaagtcatc taaattcttt tgttaaatgt accatccttc cagatacaag taggaaaagt
2761 cgccagaaga caagagctgt agggaaaacc accaacccta tcttcaacca cactatggtg
2821 tatgatgggt tcaggcctga agatctgatg gaagcctgtg tagagcttac tgtctgggac
2881 cattacaaat taaccaacca atttttggga ggtcttcgta ttggctttgg aacaggtaaa
2941 agttatggga ctgaagtgga ctggatggac tctacttcag aggaagttgc tctctgggag
3001 aagatggtaa actcccccaa tacttggatt gaagcaacac tgcctctcag aatgcttttg
3061 attgccaaga tttccaaatg agcccaaatt ccactggctc ctccactgaa aactactaaa
3121 ccggtggaat ctgatcttga aaatctgagt aggtggacaa atatcctcac tttctatcta
3181 ttgcacctaa ggaatactac acagcatgta aaagtcaatc tgcatgtgct tctttgatta
3241 caaggcccaa gggatttaaa tataacaaaa tgtgtaattt gtgactctaa tattaaataa
3301 gatatttgaa caagctagga aaattgaatt tctgctgctg cttcaaagaa aaagctgccc
3361 cagagcatta aacatggggt attgttaaga agcaaaatgt tcttgtttgc catcatgtgt
3421 ttcacaccac aattctgtgc cacagttaag agggtctggt acccttgcag gacctttgta
3481 ggttgtggga aaaagtcgca gaaagatact caaagtggag cagggaatgg agaca
//