LOCUS BC144114 3538 bp mRNA linear HUM 08-JAN-2009
DEFINITION Homo sapiens synaptotagmin-like 2, mRNA (cDNA clone MGC:177651
IMAGE:9052634), complete cds.
ACCESSION BC144114
VERSION BC144114.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3538)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3538)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: LLDM Plate: 676 Row: f Column: 24
isoform, single-stranded.
FEATURES Location/Qualifiers
source 1..3538
/db_xref="H-InvDB:HIT000502544"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177651 IMAGE:9052634"
/tissue_type="Brain, cerebellum, PCR rescued clones"
/clone_lib="NIH_MGC_310"
/note="Vector: pCR4-TOPO; Clone identification sequence
tag: CCCATCTA"
gene 1..3538
/gene="SYTL2"
/gene_synonym="CHR11SYT"
/gene_synonym="SGA72M"
/gene_synonym="SLP2"
/db_xref="GeneID:54843"
/db_xref="HGNC:HGNC:15585"
CDS 277..3084
/gene="SYTL2"
/gene_synonym="CHR11SYT"
/gene_synonym="SGA72M"
/gene_synonym="SLP2"
/codon_start=1
/product="SYTL2 protein"
/protein_id="AAI44115.1"
/db_xref="GeneID:54843"
/db_xref="HGNC:HGNC:15585"
/translation="MIDLSFLTEEEQEAIMKVLQRDAALKRAEEERVRHLPEKIKDDQ
QLKNMSGQWFYEAKAKRHRDKIHGADIIRASMRKKRPQIAAEQSKDRENGAKESWVNN
VNKDAFLPPELAGVVEEPEEDAAPASPSSSVVNPASSVIDMSQENTRKPNVSPEKQRK
NPFNSSKLPEGHSSQQTKNEQSKNGRTGLFQTSKEDELSESKEKSTVADTSIQKLEKS
KQTLPGLSNGSQIKAPIPKARKMIYKSTDLNKDDNQSFPRQRTDSLKARGAPRGILKR
NSSSSSTDSETLRYNHNFEPKSKIVSPGLTIHERISEKEHSLEDNSSPNSLEPLKHVR
FSAVKDELPQSPGLIHGREVGEFSVLESDRLKNGMEDAGDTEEFQSDPKPSQYRKPSL
FHQSTSSPYVSKSETHQPMTSGSFPINGLHSHSEVLTARPQSMENSPTINEPKDKSSE
LTRLESVLPRSPADELSHCVEPEPSQVPGGSSRDRQQGSEEEPSPVLKTLERSAARKM
PSKSLEDISSDSSNQAKVDNQPEELVRSAEDVSTVPTQPDNPFSHPDKLKRMSKSVPA
FLQDESDDRETDTASESSYQLSRHKKSPSSLTNLSSSSGMTSLSSVSGSVMSVYSGDF
GNLEVKGNIQFAIEYVESLKELHVFVAQCKDLAAADVKKQRSDPYVKAYLLPDKGKMG
KKKTLVVKKTLNPVYNEILRYKIEKQILKTQKLNLSIWHRDTFKRNSFLGEVELDLET
WDWDNKQNKQLRWYPLKRKTAPVALEAENRGEMKLALQYVPEPVPGKKLPTTGEVHIW
VKECLDLPLLRGSHLNSFVKCTILPDTSRKSRQKTRAVGKTTNPIFNHTMVYDGFRPE
DLMEACVELTVWDHYKLTNQFLGGLRIGFGTGKSYGTEVDWMDSTSEEVALWEKMVNS
PNTWIEATLPLRMLLIAKISK"
BASE COUNT 1163 a 725 c 793 g 857 t
ORIGIN
1 aacaagcgac ctgtttggca aggaatacag catccttctg agagcctctt ctcgacacta
61 tcccacagac caggacttcc tcatgggaaa gagcacttag gatcttgcta tcagctgccc
121 taaacttttg ctgagccaaa ataagacttt gatgcagaac tgaacaagat atttcatttt
181 tgtgtgtttt aatcttcctg gttgcagtct tagttgttca gccctgagaa ttttgagcca
241 catttgttgc tattattttt gcatgcactt ttcaaaatga ttgacttaag cttcctgact
301 gaagaggaac aagaggccat catgaaggtt ttgcagcggg atgctgctct gaagagggcc
361 gaagaagaga gagtcagaca tttgcctgaa aaaattaagg atgaccagca gctgaagaat
421 atgagtggcc aatggtttta tgaagccaag gcaaaaaggc acagggacaa aatccatggc
481 gcagatatca tcagagcatc tatgagaaag aagaggcccc agatagcagc tgagcagagt
541 aaagacagag aaaatggggc aaaggaaagc tgggtgaata atgtcaacaa agatgctttc
601 cttcctccag agctggctgg cgttgtagaa gagccagaag aggatgcagc accagcaagc
661 ccgagttcca gtgtggtaaa tccagcttcc agtgtgattg atatgtccca ggaaaacaca
721 aggaaaccaa atgtgtctcc agagaagcag aggaagaatc cgtttaatag ctccaagttg
781 ccagaaggtc actcgtcaca acaaactaaa aatgaacagt caaaaaatgg aagaactggt
841 ttatttcaga cttcaaaaga ggatgaattg tcagagtcaa aagaaaagtc aactgtcgca
901 gatacttcaa tccaaaagtt agagaaatca aagcagactt tgccaggcct ttcaaatggg
961 tcccaaatca aggctccaat ccccaaagcc aggaagatga tctacaaatc aactgattta
1021 aacaaagatg ataaccagtc ttttcctaga caaaggacag actccctgaa agcgagaggg
1081 gctccgagag ggatcctcaa gcgcaactcc agttccagta gcacagactc agaaaccctt
1141 cgttataatc acaactttga acccaaaagc aaaattgtgt cacctggcct aaccatccat
1201 gagagaattt ctgagaagga gcattcttta gaagacaact cttccccaaa ctccctggag
1261 ccattaaagc atgtgagatt ctctgcagtg aaggatgagc ttccacagag tcctgggcta
1321 atccatggtc gggaagtagg agaatttagt gttttagaat ctgacagatt gaaaaatgga
1381 atggaagatg caggggacac agaagagttt cagagtgacc ctaagccttc tcaatacaga
1441 aagccttcgc tttttcatca atcaacctca agcccatatg tatcaaaaag tgaaacacat
1501 cagccaatga cttctggttc ttttccaatt aatgggctgc attctcattc agaagtttta
1561 actgcaagac cacagtctat ggagaattca ccaaccatca atgaacccaa agataaatca
1621 tcagaattaa caaggcttga atctgtatta cccagaagcc ctgctgatga actgtctcat
1681 tgtgttgagc ctgagccatc tcaggtgcca ggtggcagtt ctagagaccg tcagcaaggt
1741 tcagaagaag aacccagtcc tgttttgaaa actttggaaa ggagtgccgc taggaaaatg
1801 ccttccaaaa gtctagaaga catttcatca gattcatcaa atcaagcaaa agtagataat
1861 cagccagaag aattagtgcg tagtgctgaa gatgtttcca cagtgcctac acaacctgat
1921 aatccatttt ctcaccctga caaactcaaa aggatgagca agtctgttcc agcatttctc
1981 caagatgaga gtgatgacag agaaacagat acagcatcag aaagcagtta ccagctcagc
2041 agacacaaga agagcccgag ctctttaacc aatcttagca gctcctctgg catgacgtcc
2101 ttgtcttctg tgagtggcag tgtgatgagt gtttatagtg gagactttgg caatctggaa
2161 gttaaaggaa atattcagtt tgcaattgaa tatgtggagt cactgaagga gttgcatgtt
2221 tttgtggccc agtgtaagga cttagcagca gcggatgtaa aaaaacagcg ttcagaccca
2281 tatgtaaagg cctatttgct accagacaaa ggcaaaatgg gcaagaagaa aacactcgta
2341 gtgaagaaaa ccttgaatcc tgtgtataac gaaatactgc ggtataaaat tgaaaaacaa
2401 atcttaaaga cacagaaatt gaacctgtcc atttggcatc gggatacatt taagcgcaat
2461 agtttcctag gggaggtgga acttgatttg gaaacatggg actgggataa caaacagaat
2521 aaacaattga gatggtaccc tctgaagcgg aagacagcac cagttgccct tgaagcagaa
2581 aacagaggtg aaatgaaact agctctccag tatgtcccag agccagtccc tggtaaaaag
2641 cttcctacaa ctggagaagt gcacatctgg gtgaaggaat gccttgatct accactgcta
2701 aggggaagtc atctaaattc ttttgttaaa tgtaccatcc ttccagatac aagtaggaaa
2761 agtcgccaga agacaagagc tgtagggaaa accaccaacc ctatcttcaa ccacactatg
2821 gtgtatgatg ggttcaggcc tgaagatctg atggaagcct gtgtagagct tactgtctgg
2881 gaccattaca aattaaccaa ccaatttttg ggaggtcttc gtattggctt tggaacaggt
2941 aaaagttatg ggactgaagt ggactggatg gactctactt cagaggaagt tgctctctgg
3001 gagaagatgg taaactcccc caatacttgg attgaagcaa cactgcctct cagaatgctt
3061 ttgattgcca agatttccaa atgagcccaa attccactgg ctcctccact gaaaactact
3121 aaaccggtgg aatctgatct tgaaaatctg agtaggtgga caaatatcct cactttctat
3181 ctattgcacc taaggaatac tacacagcat gtaaaagtca atctgcatgt gcttctttga
3241 ttacaaggcc caagggattt aaatataaca aaatgtgtaa tttgtgactc taatattaaa
3301 taagatattt gaacaagcta ggaaaattga atttctgctg ctgcttcaaa gaaaaagctg
3361 ccccagagca ttaaacatgg ggtattgtta agaagcaaaa tgttcttgtt tgccatcatg
3421 tgtttcacac cacaattctg tgccacagtt aagagggtct ggtacccttg caggaccttt
3481 gtaggttgtg ggaaaaagtc gcagaaagat actcaaagtg gagcagggaa tggagaca
//