LOCUS BC144110 4650 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens protein tyrosine phosphatase, receptor type, G, mRNA
(cDNA clone MGC:177647 IMAGE:9052630), complete cds.
ACCESSION BC144110
VERSION BC144110.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4650)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4650)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 17 Row: A Column: 20.
FEATURES Location/Qualifiers
source 1..4650
/db_xref="H-InvDB:HIT000502540"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:177647 IMAGE:9052630"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_363"
/lab_host="DH10B"
/note="Vector: pCR-XL-TOPO; Clone identification sequence
tag: ACTTGCTC"
gene 1..4650
/gene="PTPRG"
/gene_synonym="HPTPG"
/gene_synonym="R-PTP-GAMMA"
/gene_synonym="RPTPG"
/db_xref="GeneID:5793"
/db_xref="HGNC:HGNC:9671"
/db_xref="MIM:176886"
CDS 378..4628
/gene="PTPRG"
/gene_synonym="HPTPG"
/gene_synonym="R-PTP-GAMMA"
/gene_synonym="RPTPG"
/codon_start=1
/product="PTPRG protein"
/protein_id="AAI44111.1"
/db_xref="GeneID:5793"
/db_xref="HGNC:HGNC:9671"
/db_xref="MIM:176886"
/translation="MRRLLEPCWWILFLKITSSVLHYVVCFPALTEGYVGALHENRHG
SAVQIRRRKASGDPYWAYSGAYGPEHWVTSSVSCGGRHQSPIDILDQHARVGEEYQEL
QLDGFDNESSNKTWMKNTGKTVAILLKDDYFVSGAGLPGRFKAEKVEFHWGHSNGSAG
SEHSINGRRFPVEMQIFFYNPDDFDSFQTAISENRIIGAMAIFFQVSPRDNSALDPII
HGLKGVVHHEKETFLDPFVLRDLLPASLGSYYRYTGSLTTPPCSEIVEWIVFRRPVPI
SYHQLEAFYSIFTTEQQDHVKSVEYLRNNFRPQQRLHDRVVSKSAVRDSWNHDMTDFL
ENPLGTEASKVCSSPPIHMKVQPLNQTALQVSWSQPETIYHPPIMNYMISYSWTKNED
EKEKTFTKDSDKDLKATISHVSPDSLYLFRVQAVCRNDMRSDFSQTMLFQANTTRIFQ
GTRIVKTGVPTASPASSADMAPISSGSSTWTSSGIPFSFVSMATGMGPSSSGSQATVA
SVVTSTLLAGLGFGGGGISSFPSTVWPTRLPTAASASKQAARPVLATTEALASPGPDG
DSSPTKDGEGTEEGEKDEKSESEDGEREHEEDGEKDSEKKEKSGVTHAAEERNQTEPS
PTPSSPNRTAEGGHQTIPGHEQDHTAVPTDQTGGRRDAGPGLDPDMVTSTQVPPTATE
EQYAGSDPKRPEMPSKKPMSRGDRFSEDSRFITVNPAEKNTSGMISRPAPGRMEWIIP
LIVVSALTFVCLILLIAVLVYWRKCFQTAHFYVEDSSSPRVVPNESIPIIPIPDDMEA
IPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILA
YDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQN
TGIIVMITNLVEKGRRKCDQYWPTENSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKV
KKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVH
CSAGVGRTGTYIVIDSMLQQIKDKSTVNVLGFLKHIRTQRNYLVQTEEQYIFIHDALL
EAILGKETEVSSNQLHSYVNSILIPGVGGKTRLEKQFKLVTQCNAKYVECFSAQKECN
KEKNRNSSVVPSERARVGLAPLPGMKGTDYINASYIMGYYRSNEFIITQHPLPHTTKD
FWRMIWDHNAQIIVMLPDNQSLAEDEFVYWPSREESMNCEAFTVTLISKDRLCLSNEE
QIIIHDFILEATQDDYVLEVRHFQCPKWPNPDAPISSTFELINVIKEEALTRDGPTIV
HDEYGAVSAGMLCALTTLSQQLENENAVDVFQVAKMINLMRPGVFTDIEQYQFIYKAM
LSLVSTKENGNGPMTVDKNGAVLIADESDPAESMESLV"
BASE COUNT 1230 a 1190 c 1189 g 1041 t
ORIGIN
1 ctcaagttgg ggatcctcgg ctgctcgccg ccgccgcccg cggtccctgc ctgccccagg
61 cccggggcat cgccgccggc cgccgactcc gcgccctgcc cgatcggctc tctccttttt
121 aaacggaaag cagcctttct ccgccgagag gatcgtcccc agcgtggctc tgcgttcccg
181 gtcacttttt gagattttcc ggggggcgct cggcggcttc ccggattcca aggggactcg
241 ggccgccgag cgcggggggc ccgtggagcg ggcgagccgg ggaagcgccc cggcttagcg
301 gaggctcgca cggaggcaag aacttattca acaagtttac ctccctgctt tcctcttttc
361 gatgtgcgtt ttcggacatg cggaggttac tggaaccgtg ttggtggatt ttgttcctga
421 aaatcaccag ttccgtgctc cattatgtcg tgtgcttccc cgcgttgaca gaaggctacg
481 ttggggccct gcacgagaat agacacggca gcgcagtgca gatccgcagg cgcaaggctt
541 caggcgaccc gtactgggcc tactctggtg cctatggtcc tgagcactgg gtcacgtcta
601 gtgtcagctg tgggggccgt caccagtctc ctattgacat tttagaccag catgcgcgtg
661 ttggggaaga ataccaggaa ctgcaactcg atggcttcga caatgagtct tctaacaaaa
721 cctggatgaa aaacacaggg aaaacagtcg ccatccttct gaaagacgac tattttgtca
781 gtggagctgg tctacctggc agattcaaag ctgagaaggt ggaatttcac tggggccaca
841 gcaatggctc agcgggctct gaacacagca tcaatggcag gaggtttcct gttgagatgc
901 agattttctt ttacaatcca gatgactttg acagctttca aaccgcaatt tctgagaaca
961 gaataatcgg agccatggcc atattttttc aagtcagtcc gagggacaat tctgcactgg
1021 atcctattat ccacgggttg aagggtgtcg tacatcatga gaaggagacc tttctggatc
1081 ctttcgtcct ccgggacctc ctgcctgcat ccctgggcag ctattatcgg tacacaggtt
1141 ccttgaccac accaccgtgt agcgaaatag tggagtggat agtcttccgg agacccgtcc
1201 ccatctctta ccatcagctt gaggcttttt attccatctt caccacggag cagcaagacc
1261 atgtcaagtc ggtggagtat ctgagaaata actttcgacc acagcagcgt ctgcatgaca
1321 gggtggtgtc caagtccgcc gtccgtgact cctggaacca cgacatgaca gacttcttag
1381 aaaacccact ggggacagaa gcctctaaag tttgcagctc tccacccatc cacatgaagg
1441 tgcagcctct gaaccagacg gcactgcagg tgtcctggag ccagccggag actatctacc
1501 acccacccat catgaactac atgatctcct acagctggac caagaatgag gacgagaagg
1561 agaagacgtt tacaaaggac agcgacaaag acttgaaagc caccattagc catgtctcac
1621 ccgatagcct ttacctgttc cgagtccagg ccgtgtgtcg gaacgacatg cgcagcgact
1681 ttagccagac gatgctgttt caagctaata ccactcgaat attccaaggg accagaatag
1741 tgaaaacagg agtgcccaca gcgtctcctg cctcttcagc cgacatggcc cccatcagct
1801 cggggtcttc tacctggacg tcctctggca tcccattctc atttgtttcc atggcaactg
1861 ggatgggccc ctcctccagt ggcagccagg ccacagtggc ctcggtggtc accagcacgc
1921 tgctcgccgg cctggggttc ggcggtggtg gcatctcctc tttccccagc actgtgtggc
1981 ccacgcgcct cccgacggcc gcctcagcca gcaagcaggc ggctaggcca gtcctagcca
2041 ccacagaggc cttggcttct ccagggcccg atggtgattc gtcaccaacc aaggacggcg
2101 agggcaccga ggaaggagag aaggatgaga aaagcgagag tgaggatggg gagcgggagc
2161 acgaggagga tggagagaag gactccgaaa agaaggagaa gagtggggtg acccacgctg
2221 ccgaggagcg gaatcagacg gagcccagcc ccacaccctc gtctcctaac aggactgccg
2281 agggagggca tcagactata cctgggcatg agcaggatca cactgccgtc cccacagacc
2341 agacgggcgg aaggagggat gccggcccag gcctggaccc cgacatggtc acctccaccc
2401 aagtgccccc caccgccaca gaggagcagt atgcagggag tgatcccaag aggcccgaaa
2461 tgccatctaa aaagcctatg tcccgcgggg accgattttc tgaagacagc agatttatca
2521 ctgttaatcc agcggaaaaa aacacctctg gaatgataag ccgccctgct ccagggagga
2581 tggagtggat catccctctg attgtggtat cagccttgac cttcgtgtgc ctcatccttc
2641 tcattgctgt gctcgtttac tggagaaaat gttttcagac tgctcatttc tatgtggaag
2701 acagcagttc acctcgagtg gtccctaatg aaagtattcc tattattcct attccggatg
2761 acatggaagc cattcctgtc aaacagtttg tcaaacacat cggtgagctc tattctaata
2821 accagcatgg gttctctgag gattttgagg aagtccagcg ctgtactgct gatatgaaca
2881 tcactgcaga gcattccaat catccagaaa acaagcacaa aaacagatac atcaacattt
2941 tagcatatga tcacagtagg gtgaagttaa gacctttacc aggaaaagac tctaagcaca
3001 gcgactacat taatgcaaac tatgttgatg gttacaacaa agcaaaagcc tacattgcca
3061 cccaaggacc tttgaagtct acatttgaag atttctggag gatgatttgg gaacaaaaca
3121 ctggaatcat tgtgatgatt acgaaccttg tggaaaaagg aagacgaaaa tgtgatcagt
3181 attggccaac agagaacagt gaggaatatg gaaacattat tgtcacgctg aagagcacaa
3241 aaatacatgc ctgctacact gttcgtcgtt tttcaatcag aaatacaaaa gtgaaaaagg
3301 gtcagaaggg aaatcccaag ggtcgtcaga atgaaagggt agtgatccag tatcactata
3361 cacagtggcc tgacatggga gttcccgagt atgcccttcc agtactgact ttcgtgagga
3421 gatcctcagc agctcggatg ccagaaacgg gccctgtgtt ggtgcactgc agtgctggtg
3481 tgggcagaac aggcacctat attgtaatag acagcatgct gcaacagata aaagacaaaa
3541 gcacagttaa cgtcctggga ttcctgaagc atatcaggac acagcgtaac tacctcgtcc
3601 agactgagga gcagtacatt ttcatccatg atgccttgtt ggaagccatt cttggaaagg
3661 agactgaagt atcttcaaat cagctgcaca gctatgttaa cagcatcctt ataccaggag
3721 taggaggaaa gacacgactg gaaaagcaat tcaagctggt cacacagtgt aatgcaaaat
3781 atgtggaatg tttcagtgct cagaaagagt gtaacaaaga aaagaacaga aactcttcag
3841 ttgtgccatc tgagcgtgct cgagtgggtc ttgcaccatt gcctggaatg aaaggaacag
3901 attacattaa tgcttcttat atcatgggct attataggag caatgaattt attataactc
3961 agcatcctct gccacatact acgaaagatt tctggcgaat gatttgggat cataacgcac
4021 agatcattgt catgctgcca gacaaccaga gcttggcaga agatgagttt gtgtactggc
4081 caagtcgaga agaatccatg aactgtgagg cctttaccgt cacccttatc agcaaagaca
4141 gactgtgcct ctctaatgaa gaacaaatta tcatccatga ctttatcctt gaagctacac
4201 aggatgacta tgtcttagaa gttcggcact ttcagtgtcc caaatggcct aacccagatg
4261 cccccataag tagtaccttt gaacttatca acgtcatcaa ggaagaggcc ttaacaaggg
4321 atggtcccac cattgttcat gatgagtatg gagcagtttc agcaggaatg ttatgtgccc
4381 ttaccaccct gtcccagcaa ctggagaatg aaaatgctgt ggatgttttc caggttgcaa
4441 aaatgatcaa tcttatgagg cctggagtat tcacagacat tgaacaatac cagttcatct
4501 ataaagcaat gcttagcttg gtcagcacta aagaaaatgg aaatggtccc atgacagtag
4561 acaaaaatgg tgctgttctt attgcagatg aatcagaccc tgctgagagc atggagtccc
4621 tagtgtgact ggaatcctga aagggcactt
//