LOCUS BC144092 4315 bp mRNA linear HTC 02-JAN-2009
DEFINITION Homo sapiens cDNA clone IMAGE:9052612, with apparent retained
intron.
ACCESSION BC144092
VERSION BC144092.1
KEYWORDS HTC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 4315)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 4315)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Mike Brownstein, NIMH
cDNA Library Preparation: British Columbia Cancer Research Center
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRCB Plate: 17 Row: O Column: 11
This clone has the following problem: retained intron.
FEATURES Location/Qualifiers
source 1..4315
/db_xref="H-InvDB:HIT000502523"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:9052612"
/tissue_type="Pooled, cerebellum, kidney, placenta,
testis, lung, colon, liver, heart, thyroid, bladder,
uterus, PCR rescued clones"
/clone_lib="NIH_MGC_362"
/lab_host="DH10B"
/note="Vector: pCR4-TOPO with reversed insert; Clone
identification sequence tag: GAACCCTC"
BASE COUNT 1213 a 893 c 983 g 1226 t
ORIGIN
1 cctcattcct ttggttttgg cccaaatgat tatgtttcct ctttttggga agatttctct
61 gggtattttg atatttgtcc tgatagaagg agactttcca tcattaacag gtatttaaaa
121 atctacattt gtttgtatct ttccatatct gtagtatatg ttcttcaaaa ataggattat
181 ttgatgtgat tgctgtaaga aatggaatca aatactttat taatctttga tatggcttca
241 tttaaaccgt tttaaaatat ctccaataat tttggttttc cctcattagt aatttctggt
301 ttaaacctta cttttattta ttttgttgaa attggatgtg tatttacttg attttgataa
361 caatcttgaa tgaaaggagt gggagttaaa tggaaaaaga tggactgcct cactcctctt
421 ttccttagat atgcatgcct gcctatgatt tgggcactgg cttctctatc ttaatgtagc
481 ccaagtgtca gtttttcttt agttgttacc ttttgtactg tatcttcatt atcgaagact
541 tgactatact ttcactctgt agcacaaacc tacttatcta tagaggagat ccaagaaccc
601 aagagtgcag tttcttttct cctgcctgaa gaatcaacag acctttctct agctaccaaa
661 aagaaacagc ctctggaccg cagagaaact gaaagacagt ggttaatcag aaggcggaga
721 tctattctgt ttcctaatgg agtgaaaatc tgcccagatg aaagtgttgc agaggctgtg
781 gcaaatcatg tgaagtattt taaagtccga gtgtgtcagg aagctgtctg ggaagccttc
841 aggacttttt gggatcgact tcctgggcgt gaggaatatc attactggat gaatttgtgt
901 gaggatggag tcacaagtat atttgaaatg ggcacaaatt ttagtgaatc tgtggaacac
961 agaagcttaa tcatgaagaa actgacttat gcaaaggaaa ctgtaagcag ctctgaactg
1021 tcttctccag ttcctgttgg tgatacttca acattgggag acactactct cagtgttcca
1081 catccagagg tggacgccta tgaaggtgcc tcagagagca gcttggaaag gccagaggag
1141 agtattagca atgaaattga gaatgtgata gaagaagcca caaaaccagc aggtgaacag
1201 attgcagaat tcagtatcca ccttttgggg aagcagtaca gggaagaact acaggattcc
1261 tccagctttc accaccagca ccttgaagaa gaatttattt cagaggttga aaatgcattt
1321 actgggttac caggctacaa ggaaattcgt gtacttgaat ttaggtcccc caaggaaaat
1381 gacagtggcg tagatgttta ctatgcagtt accttcaatg gtgaggccat cagcaatacc
1441 acctgggacc tcattagcct tcactccaac aaggtggaaa accatggcct tgtggaactg
1501 gatgataaac ccactgttgt ttatacaatc agtaacttca gagattatat tgctgagaca
1561 ttgcagcaga attttttgct ggggaactct tccttgaatc cagatcctga ttccctgcag
1621 cttatcaatg tgagaggagt tttgcgtcac caaactgaag atctagtttg gaacacccaa
1681 agttcaagtc ttcaggcaac gccgtcatct attctggata atacctttca agctgcatgg
1741 ccctcagcag atgaatccat caccagcagt attccaccac ttgatttcag ctctggtcct
1801 ccctcagcca ctggcaggga actctggtca gaaagtcctt tgggtgattt agtgtctaca
1861 cacaaattag cctttccctc gaagatgggc ctcagctctt ccccagaggt tttagaggtt
1921 agcagcttga ctcttcattc tgtcaccccg gcagtgcttc agactggctt gcctgtggct
1981 tctgaggaaa ggacttctgg atctcacttg gtagaagatg gattagccaa tgttgaagag
2041 tcagaagatt ttctttctat tgattcattg ccttcaagtt cattcactca acctgtgcca
2101 aaagaaacaa taccatccat ggaagactct gatgtgtcct taacatcttc accatatctg
2161 acctcttcta taccttttgg cttggactcc ttgacctcca aagtcaaaga ccaattaaaa
2221 gtgagccctt tcctgccaga tgcatccatg gaaaaagagt taatatttga cggtggttta
2281 ggttcagggt ctgggcaaaa ggtagatctg attacttggc cacggagtga gacttcatca
2341 gagaagagcg ctgaaccact gtccaagccg tggcttgaag atgatgattc acttttgcca
2401 gctgagattg aagacaagaa actagtttta gttgacaaaa tggattccac agaccaaatt
2461 agtaagcact caaaatatga acatgatgac agatccatac actttccaga ggaagagcct
2521 cttagtgggc ctgctgtgcc catcttcgca gatactgcag ctgaatctgc gtctctaacc
2581 ctccccaagc acatatcaga agtacctggt gttgatgatt actcagttac caaagcacct
2641 cttatactga catctgtagc aatctctgcc tctactgata aatcagatca ggcagatgcc
2701 atcctaaggg aggatatgga acaaattact gagtcatcca actatgaatg gtttgacagt
2761 gaggtttcaa tggtaaagcc agatatgcaa actttgtgga ctatattgcc agaatcagag
2821 agagtttgga caagaacttc ttccctagag aaattgtcca gagacatatt ggcaagtaca
2881 ccacagagtg ctgacaggct ctggttatct gtgacacagt ctaccaaatt gcctccaacc
2941 acaatctcca ccctgctaga ggatgaagta attatgggtg tacaggatat ttcgttagaa
3001 ctggaccgga taggcacaga ttactatcag cctgagcaag tccaagagca aaatggcaag
3061 gttggtagtt atgtggaaat gtcaacaagt gttcactcca cagagatggt tagtgtggct
3121 tggcccacag aaggaggaga tgacttgagt tatacccaga cttcaggagc tttggtggtt
3181 ttcttcagcc tccgagtgac taacatgatg ttttcagaag atctgtttaa taaaaactcc
3241 ttggagtata aagccctgga gcaaagattc ttagaattgc tggttcccta tctccagtca
3301 aatctcacgg ggttccagaa cttagaaatc ctcaacttca gaaatggcag cattgtggtg
3361 aacagtcgaa tgaagtttgc caattctgtc cctcctaacg tcaacaatgc ggtgtacatg
3421 attctggaag acttttgtac cactgcctac aataccatga acttggctat tgataaatac
3481 tctcttgatg tggaatcagg tgatgaagcc aacccttgca agtttcaggc ctgtaatgaa
3541 ttttcagagt gtctggtcaa cccctggagt ggagaagcaa agtgcagatg cttccctgga
3601 tacctgagtg tggaagaacg gccctgtcag agtctctgtg acctacagcc tgacttctgc
3661 ttgaatgatg gaaagtgtga cattatgcct gggcacgggg ccatttgtag gtgccgggtg
3721 ggtgagaact ggtggtaccg aggcaagcac tgtgaggaat ttgtgtctga gcccgtgatc
3781 ataggcatca ctattgcctc cgtggttgga cttcttgtca tcttttctgc tatcatctac
3841 ttcttcatca ggactcttca agcacaccat gacaggagtg aaagagagag tcccttcagt
3901 ggctccagca ggcagcctga cagcctctca tctattgaga atgctgtgaa gtacaacccc
3961 gtgtatgaaa gtcacagggc tggatgtgag aagtatgagg gaccctatcc tcagcatccc
4021 ttctacagct ctgctagcgg agacgtgatt ggtgggctga gcagagaaga aatcagacag
4081 atgtatgaga gcagtgagct ttccagagag gaaattcaag agagaatgag agttttggaa
4141 ctgtatgcca atgatcctga gtttgcagct tttgtgagag agcaacaagt gtggctcctt
4201 tgctcgtggt tcctctgtaa gagaagggac aaactgataa ctgaggaaac tgagaaaggg
4261 aagaggttta accaaaactc ctgttctgaa actgattaga agcctggaga agatg
//