LOCUS BC144051 1390 bp mRNA linear HUM 08-JAN-2009 DEFINITION Homo sapiens ectodysplasin A, mRNA (cDNA clone MGC:177588 IMAGE:9052571), complete cds. ACCESSION BC144051 VERSION BC144051.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1390) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1390) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (12-JUN-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Mike Brownstein, NIMH cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: LLDM Plate: 676 Row: d Column: 9 isoform, single-stranded. FEATURES Location/Qualifiers source 1..1390 /db_xref="H-InvDB:HIT000502487" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:177588 IMAGE:9052571" /tissue_type="Pooled, cerebellum, kidney, placenta, testis, lung, colon, liver, heart, thyroid, bladder, uterus, PCR rescued clones" /clone_lib="NIH_MGC_361" /lab_host="DH10B" /note="Vector: pCR4-TOPO; Clone identification sequence tag: TTTTTATC" gene 1..1390 /gene="EDA" /gene_synonym="ED1-A1" /gene_synonym="ED1-A2" /gene_synonym="EDA1" /gene_synonym="HED" /gene_synonym="XHED" /gene_synonym="XLHED" /db_xref="GeneID:1896" /db_xref="HGNC:HGNC:3157" /db_xref="MIM:300451" CDS 193..1362 /gene="EDA" /gene_synonym="ED1-A1" /gene_synonym="ED1-A2" /gene_synonym="EDA1" /gene_synonym="HED" /gene_synonym="XHED" /gene_synonym="XLHED" /codon_start=1 /product="ectodysplasin A" /protein_id="AAI44052.1" /db_xref="GeneID:1896" /db_xref="HGNC:HGNC:3157" /db_xref="MIM:300451" /translation="MGYPEVERRELLPAAAPRERGSQGCGCGGAPARAGEGNSCLLFL GFFGLSLALHLLTLCCYLELRSELRRERGAESRLGGSGTPGTSGTLSSLGGLDPDSPI TSHLGQPSPKQQPLEPGEAALHSDSQDGHQMALLNFFFPDEKPYSEEESRRVRRNKRS KSNEGADGPVKNKKKGKKAGPPGPNGPPGPPGPPGPQGPPGIPGIPGIPGTTVMGPPG PPGPPGPQGPPGLQGPSGAADKAGTRENQPAVVHLQGQGSAIQVKNDLSGGVLNDWSR ITMNPKVFKLHPRSGELEVLVDGTYFIYSQVYYINFTDFASYEVVVDEKPFLQCTRSI ETGKTNYNTCYTAGVCLLKARQKIAVKMVHADISINMSKHTTFFGAIRLGEAPAS" BASE COUNT 301 a 436 c 400 g 253 t ORIGIN 1 ttcccacccc tcggagtaga gctgcacatg cggctgctcc ctgctccgtc ccgcccagcc 61 actgtcgcgc aggaacgggt ccctgcagcc cccagccgat ggcaggacag tagccgcctg 121 tcagaggtcg tgaacggctg aggcagacgc agcggctccc gggcctcaag agagtgggtg 181 tctccggagg ccatgggcta cccggaggtg gagcgcaggg aactcctgcc tgcagcagcg 241 ccgcgggagc gagggagcca gggctgcggg tgtggcgggg cccctgcccg ggcgggcgaa 301 gggaacagct gcctgctctt cctgggtttc tttggcctct cgctggccct ccacctgctg 361 acgttgtgct gctacctaga gttgcgctcg gagttgcggc gggaacgtgg agccgagtcc 421 cgccttggcg gctcgggcac ccctggcacc tctggcaccc taagcagcct cggtggcctc 481 gaccctgaca gccccatcac cagtcacctt gggcagccgt cacctaagca gcagccattg 541 gaaccgggag aagccgcact ccactctgac tcccaggacg ggcaccagat ggccctattg 601 aatttcttct tccctgatga aaagccatac tctgaagaag aaagtaggcg tgttcgccgc 661 aataaaagaa gcaaaagcaa tgaaggagca gatggcccag ttaaaaacaa gaaaaaggga 721 aagaaagcag gacctcctgg acccaatggc cctccaggac ccccaggacc tccaggaccc 781 cagggacccc caggaattcc agggattcct ggaattccag gaacaactgt tatgggacca 841 cctggtcctc caggtcctcc tggtcctcaa ggaccccctg gcctccaggg accttctggt 901 gctgctgata aagctggaac tcgagaaaac cagccagctg tggtgcatct acagggccaa 961 gggtcagcaa ttcaagtcaa gaatgatctt tcaggtggag tgctcaatga ctggtctcgc 1021 atcactatga accccaaggt gtttaagcta catccccgca gcggggagct ggaggtactg 1081 gtggacggca cctacttcat ctatagtcag gtatactaca tcaacttcac tgactttgcc 1141 agctatgagg tggtggtgga tgagaagccc ttcctgcagt gcacacgcag catcgagacg 1201 ggcaagacca actacaacac ttgctatacc gcaggcgtct gcctcctcaa ggcccggcag 1261 aagatcgccg tcaagatggt gcacgctgac atctccatca acatgagcaa gcacaccacg 1321 ttctttgggg ccatcaggct gggtgaagcc cctgcatcct agattccccc cattttgcct 1381 ctgtccgtgc //