LOCUS       BC144019                3142 bp    mRNA    linear   HUM 02-JAN-2009
DEFINITION  Homo sapiens synaptonemal complex protein 1, mRNA (cDNA clone
            MGC:177556 IMAGE:9052539), complete cds.
ACCESSION   BC144019
VERSION     BC144019.1
KEYWORDS    MGC.
SOURCE      Homo sapiens (human)
  ORGANISM  Homo sapiens
            Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
            Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
            Catarrhini; Hominidae; Homo.
REFERENCE   1  (bases 1 to 3142)
  AUTHORS   Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
            Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
            Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
            Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
            Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
            Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
            Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
            Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
            Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
            McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
            Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
            Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
            Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
            Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
            Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
            Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
            Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
            Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
  CONSRTM   Mammalian Gene Collection Program Team
  TITLE     Generation and initial analysis of more than 15,000 full-length
            human and mouse cDNA sequences
  JOURNAL   Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
   PUBMED   12477932
REFERENCE   2  (bases 1 to 3142)
  CONSRTM   NIH MGC Project
  TITLE     Direct Submission
  JOURNAL   Submitted (12-JUN-2007) National Institutes of Health, Mammalian
            Gene Collection (MGC), Bethesda, MD 20892-2590, USA
  REMARK    NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT     Contact: MGC help desk
            Email: cgapbs-r@mail.nih.gov
            Tissue Procurement: Mike Brownstein
            cDNA Library Preparation: British Columbia Cancer Research Center
            cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
            DNA Sequencing by: Genome Sequence Centre,
            BC Cancer Agency, Vancouver, BC, Canada
            info@bcgsc.bc.ca
            Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
            Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
            Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
            Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
            Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
            Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
            Kim MacDonald,  Mike R. Mayo, Josh Moran, Diana Palmquist, JR
            Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
            Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
            
            Clone distribution: MGC clone distribution information can be found
            through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
            Series: IRCB Plate: 17 Row: C Column: 11.
FEATURES             Location/Qualifiers
     source          1..3142
                     /db_xref="H-InvDB:HIT000502455"
                     /organism="Homo sapiens"
                     /mol_type="mRNA"
                     /db_xref="taxon:9606"
                     /clone="MGC:177556 IMAGE:9052539"
                     /tissue_type="Testis, PCR rescued clones"
                     /clone_lib="NIH_MGC_374"
                     /lab_host="DH10B"
                     /note="Vector: pCR4-TOPO with reversed insert; Clone
                     identification sequence tag: CCGCCGGC"
     gene            1..3142
                     /gene="SYCP1"
                     /gene_synonym="HOM-TES-14"
                     /gene_synonym="SCP1"
                     /db_xref="GeneID:6847"
                     /db_xref="HGNC:HGNC:11487"
                     /db_xref="MIM:602162"
     CDS             121..3051
                     /gene="SYCP1"
                     /gene_synonym="HOM-TES-14"
                     /gene_synonym="SCP1"
                     /codon_start=1
                     /product="synaptonemal complex protein 1"
                     /protein_id="AAI44020.1"
                     /db_xref="GeneID:6847"
                     /db_xref="HGNC:HGNC:11487"
                     /db_xref="MIM:602162"
                     /translation="MEKQKPFALFVPPRSSSSQVSAVKPQTLGGDSTFFKSFNKCTED
                     DFEFPFAKTNLSKNGENIDSDPALQKVNFLPVFEQVGNSDCHYQEGLKDSDLENSEGL
                     SRVYSKLYKEAEKIKKWKVSTEAELRQKESKLQENRKIIEAQRKAIQELQFGNEKVSL
                     KLEEGIQENKDLIKENNATRHLCNLLKETCARSAEKTKKYEYEREETRQVYMDLNSNI
                     EKMITAFEELRVQAENSRLEMHFKLKEDYEKIQHLEQEYKKEINDKEKQVSLLLIQIT
                     EKENKMKDLTFLLEESRDKVNQLEEKTKLQSENLKQSIEKQHHLTKELEDIKVSLQRS
                     VSTQKALEEDLQIATKTICQLTEEKETQMEESNKARAAHSFVVTEFETTVCSLEELLR
                     TEQQRLEKNEDQLKILTMELQKKSSELEEMTKLTNNKEVELEELKKVLGEKETLLYEN
                     KQFEKIAEELKGTEQELIGLLQAREKEVHDLEIQLTAITTSEQYYSKEVKDLKTELEN
                     EKLKNTELTSHCNKLSLENKELTQETSDMTLELKNQQEDINNNKKQEERMLKQIENLQ
                     ETETQLRNELEYVREELKQKRDEVKCKLDKSEENCNNLRKQVENKNKYIEELQQENKA
                     LKKKGTAESKQLNVYEIKVNKLELELESAKQKFGEITDTYQKEIEDKKISEENLLEEV
                     EKAKVIADEAVKLQKEIDKRCQHKIAEMVALMEKHKHQYDKIIEERDSELGLYKSKEQ
                     EQSSLRASLEIELSNLKAELLSVKKQLEIEREEKEKLKREAKENTATLKEKKDKKTQT
                     FLLETPEIYWKLDSKAVPSQTVSRNFTSVDHGISKDKRDYLWTSAKNTLSTPLPKAYT
                     VKTPTKPKLQQRENLNIPIEESKKKRKMAFEFDINSDSSETTDLLSMVSEEETLKTLY
                     RNNNPPASHLCVKTPKKAPSSLTTPGSTLKFGAIRKMREDRWAVIAKMDRKKKLKEAE
                     KLFV"
BASE COUNT         1348 a          458 c          616 g          720 t
ORIGIN      
        1 cgggagccat tggttctttc tgttgccctc atagaccgta tgtagcagtt cgcgtgggca
       61 cagaacccac ggtttcccgc tagttcttca aagtagatat ttacaaccgt aacagagaaa
      121 atggaaaagc aaaagccctt tgcattgttc gtaccaccga gatcaagcag cagtcaggtg
      181 tctgcggtga aacctcagac cctgggaggc gattccactt tcttcaagag tttcaacaaa
      241 tgtactgaag atgattttga gtttccattt gcaaagacta atctctccaa aaatggggaa
      301 aacattgatt cagatcctgc tttacaaaaa gttaatttct tgcccgtgtt tgagcaggtt
      361 ggtaattctg actgtcacta tcaggaagga ctaaaagact ctgatttgga gaattcagag
      421 ggattgagca gagtgtattc aaaactgtat aaggaggctg aaaagataaa aaaatggaaa
      481 gtaagtacag aagctgaact gagacagaaa gaaagtaagt tgcaagaaaa cagaaagata
      541 attgaagcac agcgaaaagc cattcaggaa ctgcaatttg gaaatgaaaa agtaagtttg
      601 aaattagaag aaggaataca agaaaataaa gatttaataa aagagaataa tgccacaagg
      661 catttatgta atctactcaa agaaacctgt gctagatctg cagaaaagac aaagaaatat
      721 gaatatgaac gggaagaaac caggcaagtt tatatggatc taaatagtaa cattgagaaa
      781 atgataacag cttttgagga acttcgtgtg caagctgaga attccagact ggaaatgcat
      841 tttaagttaa aggaagatta tgaaaaaatc caacaccttg aacaagaata caagaaggaa
      901 ataaatgaca aggaaaagca ggtatcacta ctattgatcc aaatcactga gaaagaaaat
      961 aaaatgaaag atttaacatt tctgctagag gaatccagag ataaagttaa tcaattagag
     1021 gaaaagacaa aattacagag tgaaaactta aaacaatcaa ttgagaaaca gcatcatttg
     1081 actaaagaac tagaagatat taaagtgtca ttacaaagaa gtgtgagtac tcaaaaggct
     1141 ttagaggaag atttacagat agcaacaaaa acaatttgtc agctaactga agaaaaagaa
     1201 actcaaatgg aagaatctaa taaagctaga gctgctcatt cgtttgtggt tactgaattt
     1261 gaaactactg tctgcagctt ggaagaatta ttgagaacag aacagcaaag attggaaaaa
     1321 aatgaagatc aattgaaaat acttaccatg gagcttcaaa agaaatcaag tgagctggaa
     1381 gagatgacta agcttacaaa taacaaagaa gtagaacttg aagaattgaa aaaagtcttg
     1441 ggagaaaagg aaacactttt atatgaaaat aaacaatttg agaagattgc tgaagaatta
     1501 aaaggaacag aacaagaact aattggtctt ctccaagcca gagagaaaga agtacatgat
     1561 ttggaaatac agttaactgc cattaccaca agtgaacagt attattcaaa agaggttaaa
     1621 gatctaaaaa ctgagcttga aaacgagaag cttaagaata ctgaattaac ttcacactgc
     1681 aacaagcttt cactagaaaa caaagagctc acacaggaaa caagtgatat gaccctagaa
     1741 ctcaagaatc agcaagaaga tattaataat aacaaaaagc aagaagaaag gatgttgaaa
     1801 caaatagaaa atcttcaaga aacagaaacc caattaagaa atgaactaga atatgtgaga
     1861 gaagagctaa aacagaaaag agatgaagtt aaatgtaaat tggacaagag tgaagaaaat
     1921 tgtaacaatt taaggaaaca agttgaaaat aaaaacaagt atattgaaga acttcagcag
     1981 gagaataagg ccttgaaaaa aaaaggtaca gcagaaagca agcaactgaa tgtttatgag
     2041 ataaaggtca ataaattaga gttagaacta gaaagtgcca aacagaaatt tggagaaatc
     2101 acagacacct atcagaaaga aattgaggac aaaaagatat cagaagaaaa tcttttggaa
     2161 gaggttgaga aagcaaaagt aatagctgat gaagcagtaa aattacagaa agaaattgat
     2221 aagcgatgtc aacataaaat agctgaaatg gtagcactta tggaaaaaca taagcaccaa
     2281 tatgataaga tcattgaaga aagagactca gaattaggac tttataagag caaagaacaa
     2341 gaacagtcat cactgagagc atctttggag attgaactat ccaatctcaa agctgaactt
     2401 ttgtctgtta agaagcaact tgaaatagaa agagaagaga aggaaaaact caaaagagag
     2461 gcaaaagaaa acacagctac tcttaaagaa aaaaaagaca agaaaacaca aacattttta
     2521 ttggaaacac ctgaaattta ttggaaattg gattctaaag cagttccttc acaaactgta
     2581 tctcgaaatt tcacatcagt tgatcatggc atatccaaag ataaaagaga ctatctgtgg
     2641 acatctgcca aaaatacttt atctacacca ttgccaaagg catatacagt gaagacacca
     2701 acaaaaccaa aactacagca aagagaaaac ttgaatatac ccattgaaga aagtaaaaaa
     2761 aagagaaaaa tggcctttga atttgatatt aattcagata gttcagaaac tactgatctt
     2821 ttgagcatgg tttcagaaga agagacattg aaaacactgt ataggaacaa taatccacca
     2881 gcttctcatc tttgtgtcaa aacaccaaaa aaggcccctt catctctaac aacccctgga
     2941 tctacactga agtttggagc tataagaaaa atgcgggagg accgttgggc tgtaattgct
     3001 aaaatggata gaaaaaaaaa actaaaagaa gctgaaaagt tatttgttta atttcagaga
     3061 atcagtgtag ttaaggagcc taataacgtg aaacttatag ttaatatttt gttcttattt
     3121 gccagagcca aattttatct gg
//